abstract：:Image-on-image regression analysis, using images to predict images, is a challenging task, due to (1) the high dimensionality and (2) the complex spatial dependence structures in image predictors and image outcomes. In this work, we propose a novel image-on-image regression model, by extending a spatial Bayesian laten...

journal_title：Biometrics

authors： Guo C,Kang J,Johnson TD

更新日期：2020-12-27 00:00:00

abstract：:Quantitative traits analyzed in Genome-Wide Association Studies (GWAS) are often nonnormally distributed. For such traits, association tests based on standard linear regression are subject to reduced power and inflated type I error in finite samples. Applying the rank-based inverse normal transformation (INT) to nonno...

journal_title：Biometrics

authors： McCaw ZR,Lane JM,Saxena R,Redline S,Lin X

更新日期：2020-12-01 00:00:00

abstract：:A time-dependent measure, termed the rate ratio, was proposed to assess the local dependence between two types of recurrent event processes in one-sample settings. However, the one-sample work does not consider modeling the dependence by covariates such as subject characteristics and treatments received. The focus of ...

journal_title：Biometrics

authors： Ning J,Cai C,Chen Y,Huang X,Wang MC

更新日期：2020-12-01 00:00:00

abstract：:We consider a two-sample problem where data come from symmetric distributions. Usual two-sample data with only magnitudes recorded, arising from case-control studies or logistic discriminant analyses, may constitute a symmetric two-sample problem. We propose a semiparametric model such that, in addition to symmetry, t...

journal_title：Biometrics

authors： Li M,Diao G,Qin J

更新日期：2020-12-01 00:00:00

abstract：:Left truncation commonly occurs in many areas, and many methods have been proposed in the literature for the analysis of various types of left-truncated failure time data. For the situation, a common approach is to conduct the analysis conditional on truncation times, and the method is relatively simple but may not be...

journal_title：Biometrics

authors： Wang P,Li D,Sun J

更新日期：2020-10-15 00:00:00

abstract：:For patients on dialysis, hospitalizations remain a major risk factor for mortality and morbidity. We use data from a large national database, United States Renal Data System, to model time-varying effects of hospitalization risk factors as functions of time since initiation of dialysis. To account for the three-level...

journal_title：Biometrics

authors： Li Y,Nguyen DV,Kürüm E,Rhee CM,Chen Y,Kalantar-Zadeh K,Şentürk D

更新日期：2020-09-01 00:00:00

abstract：:The distribution of health care payments to insurance plans has substantial consequences for social policy. Risk adjustment formulas predict spending in health insurance markets in order to provide fair benefits and health care coverage for all enrollees, regardless of their health status. Unfortunately, current risk ...

journal_title：Biometrics

authors： Zink A,Rose S

更新日期：2020-09-01 00:00:00

abstract：:This note provides a discussion on the manuscript by Wang et al. (2005) who aim to robustify inference for longitudinal data analysis by replacing the ordinary generalized estimating function with an influence-bounded, possibly biased, version. To adjust for the bias of the ensuing robust estimator, the authors provid...

journal_title：Biometrics

authors： Lunardon N,Menardi G

更新日期：2020-09-01 00:00:00

abstract：:When the observed data are contaminated with errors, the standard two-sample testing approaches that ignore measurement errors may produce misleading results, including a higher type-I error rate than the nominal level. To tackle this inconsistency, a nonparametric test is proposed for testing equality of two distribu...

journal_title：Biometrics

authors： Lee D,Lahiri SN,Sinha S

更新日期：2020-09-01 00:00:00

abstract：:Multinomial data arise in many areas of the life sciences, such as mark-recapture studies and phylogenetics, and will often by overdispersed, with the variance being higher than predicted by a multinomial model. The quasi-likelihood approach to modeling this overdispersion involves the assumption that the variance is ...

journal_title：Biometrics

authors： Afroz F,Parry M,Fletcher D

更新日期：2020-09-01 00:00:00

abstract：:Many problems that appear in biomedical decision-making, such as diagnosing disease and predicting response to treatment, can be expressed as binary classification problems. The support vector machine (SVM) is a popular classification technique that is robust to model misspecification and effectively handles high-dime...

journal_title：Biometrics

authors： Luckett DJ,Laber EB,El-Kamary SS,Fan C,Jhaveri R,Perou CM,Shebl FM,Kosorok MR

更新日期：2020-08-31 00:00:00

abstract：:With advancements in technology, the collection of multiple types of measurements on a common set of subjects is becoming routine in science. Some notable examples include multimodal neuroimaging studies for the simultaneous investigation of brain structure and function and multi-omics studies for combining genetic an...

journal_title：Biometrics

authors： Zhao Y,Li L,Caffo BS

更新日期：2020-08-13 00:00:00

abstract：:As ultra high-dimensional longitudinal data are becoming ever more apparent in fields such as public health and bioinformatics, developing flexible methods with a sparse model is of high interest. In this setting, the dimension of the covariates can potentially grow exponentially as ...

journal_title：Biometrics

authors： Green B,Lian H,Yu Y,Zu T

更新日期：2020-08-04 00:00:00

abstract：:This paper describes methodology for analyzing data from cluster randomized trials with count outcomes, taking indirect effects as well spatial effects into account. Indirect effects are modeled using a novel application of a measure of depth within the intervention arm. Both direct and indirect effects can be estimat...

journal_title：Biometrics

authors： Anaya-Izquierdo K,Alexander N

更新日期：2020-06-18 00:00:00

abstract：:The simultaneous testing of multiple hypotheses is common to the analysis of high-dimensional data sets. The two-group model, first proposed by Efron, identifies significant comparisons by allocating observations to a mixture of an empirical null and an alternative distribution. In the Bayesian nonparametrics literatu...

journal_title：Biometrics

authors： Denti F,Guindani M,Leisen F,Lijoi A,Wadsworth WD,Vannucci M

更新日期：2020-06-14 00:00:00

abstract：:Advances in sequencing technologies and bioinformatics tools have vastly improved our ability to collect and analyze data from complex microbial communities. A major goal of microbiome studies is to correlate the overall microbiome composition with clinical or environmental variables. La Rosa et al. recently proposed ...

journal_title：Biometrics

authors： Song Y,Zhao H,Wang T

更新日期：2020-06-01 00:00:00

abstract：:Identifying disease-associated changes in DNA methylation can help us gain a better understanding of disease etiology. Bisulfite sequencing allows the generation of high-throughput methylation profiles at single-base resolution of DNA. However, optimally modeling and analyzing these sparse and discrete sequencing data...

journal_title：Biometrics

authors： Zhao K,Oualkacha K,Lakhal-Chaieb L,Labbe A,Klein K,Ciampi A,Hudson M,Colmegna I,Pastinen T,Zhang T,Daley D,Greenwood CMT

更新日期：2020-05-21 00:00:00

abstract：:We propose a Bayesian latent Ornstein-Uhlenbeck (OU) model to analyze unbalanced longitudinal data of binary and ordinal variables, which are manifestations of fewer continuous latent variables. We focus on the evolution of such latent variables when they continuously change over time. Existing approaches are limited ...

journal_title：Biometrics

authors： Tran TD,Lesaffre E,Verbeke G,Duyck J

更新日期：2020-05-11 00:00:00

abstract：:Large amounts of longitudinal health records are now available for dynamic monitoring of the underlying processes governing the observations. However, the health status progression across time is not typically observed directly: records are observed only when a subject interacts with the system, yielding irregular and...

journal_title：Biometrics

authors： Luo Y,Stephens DA,Verma A,Buckeridge DL

更新日期：2020-03-11 00:00:00

abstract：:This paper proposes a two-stage phase I-II clinical trial design to optimize dose-schedule regimes of an experimental agent within ordered disease subgroups in terms of the toxicity-efficacy trade-off. The design is motivated by settings where prior biological information indicates it is certain that efficacy will imp...

journal_title：Biometrics

authors： Lin R,Thall PF,Yuan Y

更新日期：2020-03-01 00:00:00

abstract：:Stepped wedge designed trials are a type of cluster-randomized study in which the intervention is introduced to each cluster in a random order over time. This design is often used to assess the effect of a new intervention as it is rolled out across a series of clinics or communities. Based on a permutation argument, ...

journal_title：Biometrics

authors： Hughes JP,Heagerty PJ,Xia F,Ren Y

更新日期：2020-03-01 00:00:00

abstract：:In biomedical cohort studies for assessing the association between an outcome variable and a set of covariates, usually, some covariates can only be measured on a subgroup of study subjects. An important design question is-which subjects to select into the subgroup to increase statistical efficiency. When the outcome ...

journal_title：Biometrics

authors： Wang L,Williams ML,Chen Y,Chen J

更新日期：2020-03-01 00:00:00

abstract：:Interference occurs between individuals when the treatment (or exposure) of one individual affects the outcome of another individual. Previous work on causal inference methods in the presence of interference has focused on the setting where it is a priori assumed that there is "partial interference," in the sense that...

journal_title：Biometrics

authors： Loh WW,Hudgens MG,Clemens JD,Ali M,Emch ME

更新日期：2020-03-01 00:00:00

abstract：:Experiments that longitudinally collect RNA sequencing (RNA-seq) data can provide transformative insights in biology research by revealing the dynamic patterns of genes. Such experiments create a great demand for new analytic approaches to identify differentially expressed (DE) genes based on large-scale time-course c...

journal_title：Biometrics

authors： Cao M,Zhou W,Breidt FJ,Peers G

更新日期：2020-03-01 00:00:00

abstract：:Despite major methodological developments, Bayesian inference in Gaussian graphical models remains challenging in high dimension due to the tremendous size of the model space. This article proposes a method to infer the marginal and conditional independence structures between variables by multiple testing, which bypas...

journal_title：Biometrics

authors： Leday GGR,Richardson S

更新日期：2019-12-01 00:00:00

abstract：:Within the framework of Fisher's discriminant analysis, we propose a multiclass classification method which embeds variable screening for ultrahigh-dimensional predictors. Leveraging interfeature correlations, we show that the proposed linear classifier recovers informative features with probability tending to one and...

journal_title：Biometrics

authors： Li Y,Hong HG,Li Y

更新日期：2019-12-01 00:00:00

abstract：:Genetic variants associated with disease outcomes can be used to develop personalized treatment. To reach this precision medicine goal, hundreds of large-scale genome-wide association studies (GWAS) have been conducted in the past decade to search for promising genetic variants associated with various traits. They hav...

journal_title：Biometrics

authors： Masotti M,Guo B,Wu B

更新日期：2019-12-01 00:00:00

abstract：:Recurrent events data are commonly encountered in medical studies. In many applications, only the number of events during the follow-up period rather than the recurrent event times is available. Two important challenges arise in such studies: (a) a substantial portion of subjects may not experience the event, and (b) ...

journal_title：Biometrics

authors： Diao G,Zeng D,Hu K,Ibrahim JG

更新日期：2019-12-01 00:00:00

abstract：:Dynamic treatment regimes (DTRs) aim to formalize personalized medicine by tailoring treatment decisions to individual patient characteristics. G-estimation for DTR identification targets the parameters of a structural nested mean model, known as the blip function, from which the optimal DTR is derived. Despite its po...

journal_title：Biometrics

authors： Wallace MP,Moodie EEM,Stephens DA

更新日期：2019-12-01 00:00:00

abstract：:Dilution assays to determine solute concentration have found wide use in biomedical research. Many dilution assays return imprecise concentration estimates because they are only done to orders of magnitude. Previous statistical work has focused on how to design efficient experiments that can return more precise estima...

journal_title：Biometrics

authors： Ferguson JM,Miura TA,Miller CR

更新日期：2019-09-01 00:00:00

abstract：:Inference for continuous time multi-state models presents considerable computational difficulties when the process is only observed at discrete time points with no additional information about the state transitions. In fact, for general multi-state Markov model, evaluation of the likelihood function is possible only v...

journal_title：Biometrics

authors： Tancredi A

更新日期：2019-09-01 00:00:00

abstract：:Drawing inferences for high-dimensional models is challenging as regular asymptotic theories are not applicable. This article proposes a new framework of simultaneous estimation and inferences for high-dimensional linear models. By smoothing over partial regression estimates based on a given variable selection scheme,...

journal_title：Biometrics

authors： Fei Z,Zhu J,Banerjee M,Li Y

更新日期：2019-06-01 00:00:00

abstract：:We describe an exact, unconditional, non-randomized procedure for producing confidence intervals for the grand mean in a normal-normal random effects meta-analysis. The procedure targets meta-analyses based on too few primary studies, ≤ 7 , say, to ...

journal_title：Biometrics

authors： Michael H,Thornton S,Xie M,Tian L

更新日期：2019-06-01 00:00:00

abstract：:Alterations in DNA methylation have been linked to the development and progression of many diseases. The bisulfite sequencing technique presents methylation profiles at base resolution. Count data on methylated and unmethylated reads provide information on the methylation level at each CpG site. As more bisulfite sequ...

journal_title：Biometrics

authors： Ji T

更新日期：2019-06-01 00:00:00

abstract：:We present a method for individual and integrative analysis of high dimension, low sample size data that capitalizes on the recurring theme in multivariate analysis of projecting higher dimensional data onto a few meaningful directions that are solutions to a generalized eigenvalue problem. We propose a general framew...

journal_title：Biometrics

authors： Safo SE,Ahn J,Jeon Y,Jung S

更新日期：2018-12-01 00:00:00

abstract：:In multivariate recurrent event data regression, observation of recurrent events is usually terminated by other events that are associated with the recurrent event processes, resulting in informative censoring. Additionally, some covariates could be measured with errors. In some applications, an instrumental variable ...

journal_title：Biometrics

authors： Yu H,Cheng YJ,Wang CY

更新日期：2018-09-01 00:00:00

abstract：:Traditional paradigms for clinical translation are challenged in settings where multiple contemporaneous therapeutic strategies have been identified as potentially beneficial. Platform trials have emerged as an approach for sequentially comparing multiple trials using a single protocol. The Ebola virus disease outbrea...

journal_title：Biometrics

authors： Kaizer AM,Hobbs BP,Koopmeiners JS

更新日期：2018-09-01 00:00:00

abstract：:In the field of cardio-thoracic surgery, valve function is monitored over time after surgery. The motivation for our research comes from a study which includes patients who received a human tissue valve in the aortic position. These patients are followed prospectively over time by standardized echocardiographic assess...

journal_title：Biometrics

authors： Andrinopoulou ER,Eilers PHC,Takkenberg JJM,Rizopoulos D

更新日期：2018-06-01 00:00:00

abstract：:Truncation is a well-known phenomenon that may be present in observational studies of time-to-event data. While many methods exist to adjust for either left or right truncation, there are very few methods that adjust for simultaneous left and right truncation, also known as double truncation. We propose a Cox regressi...

journal_title：Biometrics

authors： Rennert L,Xie SX

更新日期：2018-06-01 00:00:00

abstract：:Objective measures of oxygen consumption and carbon dioxide production by mammals are used to predict their energy expenditure. Since energy expenditure is not directly observable, it can be viewed as a latent construct with multiple physical indirect measures such as respiratory quotient, volumetric oxygen consumptio...

journal_title：Biometrics

authors： Tekwe CD,Zoh RS,Bazer FW,Wu G,Carroll RJ

更新日期：2018-03-01 00:00:00