A pairwise pseudo-likelihood approach for left-truncated and interval-censored data under the Cox model.

Abstract:

:Left truncation commonly occurs in many areas, and many methods have been proposed in the literature for the analysis of various types of left-truncated failure time data. For the situation, a common approach is to conduct the analysis conditional on truncation times, and the method is relatively simple but may not be efficient. In this paper, we discuss regression analysis of such data arising from the proportional hazards model that also suffer interval censoring. For the problem, a pairwise pseudo-likelihood approach is proposed that aims to recover some missing information in the conditional methods. The resulting estimator is shown to be consistent and asymptotically normal. A simulation study is conducted to assess the performance of the proposed method and suggests that it works well in practical situations and is indeed more efficient than the existing method. The approach is also applied to a set of real data arising from an AIDS cohort study.

journal_name

Biometrics

journal_title

Biometrics

authors

Wang P,Li D,Sun J

doi

10.1111/biom.13394

subject

Has Abstract

pub_date

2020-10-15 00:00:00

eissn

0006-341X

issn

1541-0420

pub_type

杂志文章
  • To use or not to use? Backward equations in stochastic carcinogenesis models.

    abstract::The method based on the Kolmogorov backward equations of Little (1995, Biometrics 51, 1278-1291) for computing hazard functions for the multistage carcinogenesis models fails when model parameters are time-dependent. In addition to suggesting an alternative method based on the Kolmogorov forward equation, this note hi...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Zheng Q

    更新日期:1998-03-01 00:00:00

  • A multi-source adaptive platform design for testing sequential combinatorial therapeutic strategies.

    abstract::Traditional paradigms for clinical translation are challenged in settings where multiple contemporaneous therapeutic strategies have been identified as potentially beneficial. Platform trials have emerged as an approach for sequentially comparing multiple trials using a single protocol. The Ebola virus disease outbrea...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12841

    authors: Kaizer AM,Hobbs BP,Koopmeiners JS

    更新日期:2018-09-01 00:00:00

  • Dose-finding designs for HIV studies.

    abstract::We present a class of simple designs that can be used in early dose-finding studies in HIV. Such designs, in contrast with Phase I designs in cancer, have a lot of the Phase II flavor about them. Information on efficacy is obtained during the trial and is as important as that relating to toxicity. The designs proposed...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.01018.x

    authors: O'Quigley J,Hughes MD,Fenton T

    更新日期:2001-12-01 00:00:00

  • Estimating predictors for long- or short-term survivors.

    abstract::Suppose that the response variable in a well-executed clinical or observational study to evaluate a treatment is the time to a certain event, and a set of baseline covariates or predictors was collected for each study patient. Furthermore, suppose that a significant number of study patients had nontrivial, long-term a...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2003.00116.x

    authors: Tian L,Wang W,Wei LJ

    更新日期:2003-12-01 00:00:00

  • Unbalanced regression analysis with residuals having a covariance structure of intra-class form.

    abstract::Let Yi be an ni X 1 vector of observations, Xi an ni X p matrix of known values, and beta an unknown p X 1 with the structure Yi = Xi beta + epsilon i, where the covariance matrix of epsilon i is of intra-class form, that is Cov (epsilon i) = sigma2[(1 - rho) Ii + rho e i e i'] where Ii is the ni X ni identity matrix ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Wiorkowski JJ

    更新日期:1975-09-01 00:00:00

  • A logistic-bivariate normal model for overdispersed two-state Markov processes.

    abstract::We describe a logistic-bivariate normal mixture model for a two-state Markov chain in which each individual makes transitions between states according to a subject-specific transition probability matrix. The use of the bivariate normal mixing distribution facilitates inferences regarding the correlation of the random ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Cook RJ,Ng ET

    更新日期:1997-03-01 00:00:00

  • Matched case-control data analysis with selection bias.

    abstract::Case-control studies offer a rapid and efficient way to evaluate hypotheses. On the other hand, proper selection of the controls is challenging, and the potential for selection bias is a major weakness. Valid inferences about parameters of interest cannot be drawn if selection bias exists. Furthermore, the selection b...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.01106.x

    authors: Lin IF,Paik MC

    更新日期:2001-12-01 00:00:00

  • Applications of likelihood asymptotics for nonlinear regression in herbicide bioassays.

    abstract::Dose-response models are intensively used in herbicide bioassays. Despite recent advancements in the development of new herbicides, statistical analyses are commonly based on asymptotic approximations that are sometimes poor. This paper presents the use of recent results in higher order asymptotics for likelihood-base...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2000.01204.x

    authors: Bellio R,Jensen JE,Seiden P

    更新日期:2000-12-01 00:00:00

  • Impact of time to start treatment following infection with application to initiating HAART in HIV-positive patients.

    abstract::We estimate how the effect of antiretroviral treatment depends on the time from HIV-infection to initiation of treatment, using observational data. A major challenge in making inferences from such observational data arises from biases associated with the nonrandom assignment of treatment, for example bias induced by d...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2011.01738.x

    authors: Lok JJ,DeGruttola V

    更新日期:2012-09-01 00:00:00

  • Objective Bayesian search of Gaussian directed acyclic graphical models for ordered variables with non-local priors.

    abstract::Directed acyclic graphical (DAG) models are increasingly employed in the study of physical and biological systems to model direct influences between variables. Identifying the graph from data is a challenging endeavor, which can be more reasonably tackled if the variables are assumed to satisfy a given ordering; in th...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12018

    authors: Altomare D,Consonni G,La Rocca L

    更新日期:2013-06-01 00:00:00

  • Subsampling versus bootstrapping in resampling-based model selection for multivariable regression.

    abstract::In recent years, increasing attention has been devoted to the problem of the stability of multivariable regression models, understood as the resistance of the model to small changes in the data on which it has been fitted. Resampling techniques, mainly based on the bootstrap, have been developed to address this issue....

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12381

    authors: De Bin R,Janitza S,Sauerbrei W,Boulesteix AL

    更新日期:2016-03-01 00:00:00

  • Multiple imputation methods for estimating regression coefficients in the competing risks model with missing cause of failure.

    abstract::We propose a method to estimate the regression coefficients in a competing risks model where the cause-specific hazard for the cause of interest is related to covariates through a proportional hazards relationship and when cause of failure is missing for some individuals. We use multiple imputation procedures to imput...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.2001.01191.x

    authors: Lu K,Tsiatis AA

    更新日期:2001-12-01 00:00:00

  • Spatial-temporal modeling of the association between air pollution exposure and preterm birth: identifying critical windows of exposure.

    abstract::Exposure to high levels of air pollution during the pregnancy is associated with increased probability of preterm birth (PTB), a major cause of infant morbidity and mortality. New statistical methodology is required to specifically determine when a particular pollutant impacts the PTB outcome, to determine the role of...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2012.01774.x

    authors: Warren J,Fuentes M,Herring A,Langlois P

    更新日期:2012-12-01 00:00:00

  • Growth curve models of repeated binary response.

    abstract::Experimental designs that include repeated measures of binary response variables over time and under different conditions are common in biology. In such settings, it is often desirable to characterize the response pattern over time. When response variables are continuous, this characterization can be made in terms of ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Stanek EJ 3rd,Diehl SR

    更新日期:1988-12-01 00:00:00

  • Incorporating marginal covariate information in a nonparametric regression model for a sample of R x C tables.

    abstract:SUMMARY:Nonparametric regression models are proposed in the framework of ecological inference for exploratory modeling of disease prevalence rates adjusted for variables, such as age, ethnicity/race, and socio-economic status. Ecological inference is needed when a response variable and covariate are not available at th...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2008.00997.x

    authors: Staniswalis JG

    更新日期:2008-12-01 00:00:00

  • An improved life table method.

    abstract::A life table estimates probabilities of surviving and of dying as well as death rates, as these would apply in a stationary population with the same underlying continuous mortality curve as the observed population. We have derived approximations to the probability of surviving that require no iteration, do not depend ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Keyfitz N,Frauenthal J

    更新日期:1975-12-01 00:00:00

  • Regression analysis of case K interval-censored failure time data in the presence of informative censoring.

    abstract::Interval-censored failure time data occur in many fields such as demography, economics, medical research, and reliability and many inference procedures on them have been developed (Sun, 2006; Chen, Sun, and Peace, 2012). However, most of the existing approaches assume that the mechanism that yields interval censoring ...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12527

    authors: Wang P,Zhao H,Sun J

    更新日期:2016-12-01 00:00:00

  • Improved dynamic predictions from joint models of longitudinal and survival data with time-varying effects using P-splines.

    abstract::In the field of cardio-thoracic surgery, valve function is monitored over time after surgery. The motivation for our research comes from a study which includes patients who received a human tissue valve in the aortic position. These patients are followed prospectively over time by standardized echocardiographic assess...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12814

    authors: Andrinopoulou ER,Eilers PHC,Takkenberg JJM,Rizopoulos D

    更新日期:2018-06-01 00:00:00

  • Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models.

    abstract::We consider a semiparametric regression model that relates a normal outcome to covariates and a genetic pathway, where the covariate effects are modeled parametrically and the pathway effect of multiple gene expressions is modeled parametrically or nonparametrically using least-squares kernel machines (LSKMs). This un...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2007.00799.x

    authors: Liu D,Lin X,Ghosh D

    更新日期:2007-12-01 00:00:00

  • Locally efficient estimation of the quality-adjusted lifetime distribution with right-censored data and covariates.

    abstract::Zhao and Tsiatis (1997) consider the problem of estimation of the distribution of the quality-adjusted lifetime when the chronological survival time is subject to right censoring. The quality-adjusted lifetime is typically defined as a weighted sum of the times spent in certain states up until death or some other fail...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.1999.00530.x

    authors: van der Laan MJ,Hubbard A

    更新日期:1999-06-01 00:00:00

  • Tests for monotone mean residual life, using randomly censored data.

    abstract::At any age the mean residual life function gives the expected remaining life at that age. Reliabilists and biometricians have found it useful to categorize failure distributions by the monotonicity properties of the mean residual life function. Hollander and Proschan (1975, Biometrika 62, 585-593) have derived tests o...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:

    authors: Chen YY,Hollander M,Langberg NA

    更新日期:1983-03-01 00:00:00

  • Statistical inference for serial dilution assay data.

    abstract::Serial dilution assays are widely employed for estimating substance concentrations and minimum inhibitory concentrations. The Poisson-Bernoulli model for such assays is appropriate for count data but not for continuous measurements that are encountered in applications involving substance concentrations. This paper pre...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.0006-341x.1999.01215.x

    authors: Lee ML,Whitmore GA

    更新日期:1999-12-01 00:00:00

  • Determining the number of clusters using the weighted gap statistic.

    abstract::Estimating the number of clusters in a data set is a crucial step in cluster analysis. In this article, motivated by the gap method (Tibshirani, Walther, and Hastie, 2001, Journal of the Royal Statistical Society B63, 411-423), we propose the weighted gap and the difference of difference-weighted (DD-weighted) gap met...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2007.00784.x

    authors: Yan M,Ye K

    更新日期:2007-12-01 00:00:00

  • Accelerated hazards model based on parametric families generalized with Bernstein polynomials.

    abstract::A transformed Bernstein polynomial that is centered at standard parametric families, such as Weibull or log-logistic, is proposed for use in the accelerated hazards model. This class provides a convenient way towards creating a Bayesian nonparametric prior for smooth densities, blending the merits of parametric and no...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12104

    authors: Chen Y,Hanson T,Zhang J

    更新日期:2014-03-01 00:00:00

  • Real-time individual predictions of prostate cancer recurrence using joint models.

    abstract::Patients who were previously treated for prostate cancer with radiation therapy are monitored at regular intervals using a laboratory test called Prostate Specific Antigen (PSA). If the value of the PSA test starts to rise, this is an indication that the prostate cancer is more likely to recur, and the patient may wis...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2012.01823.x

    authors: Taylor JM,Park Y,Ankerst DP,Proust-Lima C,Williams S,Kestin L,Bae K,Pickles T,Sandler H

    更新日期:2013-03-01 00:00:00

  • Capitalizing on opportunistic data for monitoring relative abundances of species.

    abstract::With the internet, a massive amount of information on species abundance can be collected by citizen science programs. However, these data are often difficult to use directly in statistical inference, as their collection is generally opportunistic, and the distribution of the sampling effort is often not known. In this...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12431

    authors: Giraud C,Calenge C,Coron C,Julliard R

    更新日期:2016-06-01 00:00:00

  • Identification of differential aberrations in multiple-sample array CGH studies.

    abstract::Most existing methods for identifying aberrant regions with array CGH data are confined to a single target sample. Focusing on the comparison of multiple samples from two different groups, we develop a new penalized regression approach with a fused adaptive lasso penalty to accommodate the spatial dependence of the cl...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/j.1541-0420.2010.01457.x

    authors: Wang HJ,Hu J

    更新日期:2011-06-01 00:00:00

  • Sequential monitoring for comparison of changes in a response variable in clinical studies.

    abstract::The spending function approach proposed by Lan and DeMets (1983, Biometrika 70, 659-663) for sequential monitoring of clinical trials is applied to situations where comparison of changes in a continuous response variable between two groups is the primary concern. Death, loss to follow-up, and missed visits could cause...

    journal_title:Biometrics

    pub_type: 临床试验,杂志文章

    doi:

    authors: Wu MC,Lan KK

    更新日期:1992-09-01 00:00:00

  • Nonparametric comparison of two survival-time distributions in the presence of dependent censoring.

    abstract::When testing the null hypothesis that treatment arm-specific survival-time distributions are equal, the log-rank test is asymptotically valid when the distribution of time to censoring is conditionally independent of randomized treatment group given survival time. We introduce a test of the null hypothesis for use whe...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/1541-0420.00059

    authors: DiRienzo AG

    更新日期:2003-09-01 00:00:00

  • Dynamic models for estimating the effect of HAART on CD4 in observational studies: Application to the Aquitaine Cohort and the Swiss HIV Cohort Study.

    abstract::Highly active antiretroviral therapy (HAART) has proved efficient in increasing CD4 counts in many randomized clinical trials. Because randomized trials have some limitations (e.g., short duration, highly selected subjects), it is interesting to assess the effect of treatments using observational studies. This is chal...

    journal_title:Biometrics

    pub_type: 杂志文章

    doi:10.1111/biom.12564

    authors: Prague M,Commenges D,Gran JM,Ledergerber B,Young J,Furrer H,Thiébaut R

    更新日期:2017-03-01 00:00:00