The secondary structure of bacteriorhodopsin in organic solution. A Fourier transform infrared study.

Abstract:

:Fourier transform infrared spectroscopy is used to estimate the secondary structure of bacteriorhodopsin dissolved in chloroform-methanol (1:1 v/v), 0.1 M LiClO4. Curve-fitting of the deconvolved spectra in the amide I region shows that the total content of alpha-helices, reverse turns and beta-sheets are similar to the native state. However, the alpha II-helices, which are the major helical class in native bacteriorhodopsin, are greatly decreased in the solubilized sample. Similarly, the reverse turns and the beta-sheets are strongly altered.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Torres J,Padrós E

doi

10.1016/0014-5793(93)81331-s

subject

Has Abstract

pub_date

1993-02-22 00:00:00

pages

77-9

issue

1

eissn

0014-5793

issn

1873-3468

pii

0014-5793(93)81331-S

journal_volume

318

pub_type

杂志文章
  • Spectroscopic characterization of PS I core complexes from thermophilic Synechococcus sp. Identical reoxidation kinetics of A1- before and after removal of the iron-sulfur-clusters FA and FB.

    abstract::Monomeric and trimeric PS I complexes missing the three stromal subunits E,C and D (termed PS I core complexes) were prepared from the thermophilic cyanobacterium Synechococcus sp. by incubation with urea. The subunits E,C and D are sequentially removed. In the monomeric PS I the subunit C is removed with a half life ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)80364-1

    authors: Lüneberg J,Fromme P,Jekow P,Schlodder E

    更新日期:1994-01-31 00:00:00

  • Transiently disordered tails accelerate folding of globular proteins.

    abstract::Numerous biological proteins exhibit intrinsic disorder at their termini, which are associated with multifarious functional roles. Here, we show the surprising result that an increased percentage of terminal short transiently disordered regions with enhanced flexibility (TstDREF) is associated with accelerated folding...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.12725

    authors: Mallik S,Ray T,Kundu S

    更新日期:2017-07-01 00:00:00

  • Histone acetylation and gene induction in human cells.

    abstract::An antibody recognising acetylated core histones was used to immunoprecipitate chromatin fragments from proliferating human K562 cells and from cells induced to differentiate with the phorbol ester 12-O-tetradecanoylphorbol-13-acetate (TPA). The DNA of the acetylated chromatin was probed with sequences of platelet der...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)81601-u

    authors: Clayton AL,Hebbes TR,Thorne AW,Crane-Robinson C

    更新日期:1993-12-20 00:00:00

  • Proteolytic cleavage of ALF into alpha- and beta-subunits that form homologous and heterologous complexes with somatic TFIIA and TRF2 in male germ cells.

    abstract::Male germ cells specifically express paralogues of components of the general transcription apparatus including ALF a paralogue of TFIIAalpha/beta. We show that endogenous ALF is proteolytically cleaved to give alpha- and beta-subunits and we map the proteolytic cleavage site by mass spectrometry. Immunoprecipitations ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2005.04.083

    authors: Catena R,Argentini M,Martianov I,Parello C,Brancorsini S,Parvinen M,Sassone-Corsi P,Davidson I

    更新日期:2005-06-20 00:00:00

  • Mesenchymal stem cells attenuate cardiac fibroblast proliferation and collagen synthesis through paracrine actions.

    abstract::Mesenchymal stem cells (MSC) transplantation has been shown to decrease fibrosis in the heart; however, whether MSC directly influence the function of cardiac fibroblasts (CFB) remains unknown. MSC-conditioned medium significantly attenuated proliferation of CFB compared with CFB-conditioned medium. MSC-conditioned me...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2007.07.028

    authors: Ohnishi S,Sumiyoshi H,Kitamura S,Nagaya N

    更新日期:2007-08-21 00:00:00

  • Sodium nitroprusside inhibits proliferation and putrescine synthesis in human colon carcinoma cells.

    abstract::In human colon carcinoma HT-29 Glc(-/+) cells, L-arginine is the common precursor of polyamines which are absolutely necessary for cellular proliferation and nitric oxide (NO) with reported anti-proliferative activity. The aim of the present work was to test the effect of the NO donor sodium nitroprusside (SNP) on pol...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(96)01122-2

    authors: Blachier F,Robert V,Selamnia M,Mayeur C,Duee PH

    更新日期:1996-11-04 00:00:00

  • The lysosomal/phagosomal membrane protein h-lamp-1 is a target of the IgA1 protease of Neisseria gonorrhoeae.

    abstract::Lysosomal/phagosomal membranes of mammalian cells are coated by highly conserved glycoproteins (lamps) that are thought to protect the membranes from degradation. Interestingly, we identified an amino acid sequence in human lamp-1 characteristic of a cleavage site for the Neisseria gonorrhoeae IgA1 protease. Furthermo...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00163-4

    authors: Hauck CR,Meyer TF

    更新日期:1997-03-17 00:00:00

  • Spectroscopic and photochemical analysis of proteorhodopsin variants from the surface of the Arctic Ocean.

    abstract::Proteorhodopsin (PR), a retinal-containing seven transmembrane helix protein, functions as a light-driven proton pump. Using PCR, we isolated 18 PR variants originating from the surface of the Arctic Ocean. Their absorption maxima were between 517 and 546 nm at pH 7. One of the isolates turned out to be identical to G...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2008.04.025

    authors: Jung JY,Choi AR,Lee YK,Lee HK,Jung KH

    更新日期:2008-05-28 00:00:00

  • Long-range electrostatic effects on peptide folding.

    abstract::The reversible folding/unfolding of a short peptide in solution is studied by molecular dynamics simulations. The effects of long-range electrostatic interactions are examined and found to be important both for the equilibrium between folded and unfolded states and the dynamics of the folding process. The neglect of l...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)01079-0

    authors: Aqvist J

    更新日期:1999-09-03 00:00:00

  • Inhibition of epidermal growth factor-dependent protein tyrosine phosphorylation by phorbol myristate acetate is mediated by protein tyrosine phosphatase activity.

    abstract::Incubation of HER14 cells with phorbol myristate acetate (PMA) decreases epidermal growth factor (EGF)-dependent protein tyrosine phosphorylation, except for a 40-kDa MAP kinase II-like protein, whose tyrosine phosphorylation is further enhanced. The inhibitory effect of PMA on EGF-dependent protein tyrosine phosphory...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)80374-9

    authors: Errasfa M,Stern A

    更新日期:1994-02-14 00:00:00

  • Effect of Graves' IgG on gene transcription in human thyroid cell cultures. Thyroglobulin gene activation.

    abstract::In Graves' disease (GD) the presence of antibodies to the thyroid stimulating hormone (TSH) receptor leads to stimulation of the thyroid gland. The thyroid stimulating activity of Graves' IgG is normally ascertained by bioassays measuring cAMP production. We have investigated the effect of Graves' IgG on the quantitat...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(88)80377-6

    authors: Kung AW,Collison K,Banga JP,McGregor AM

    更新日期:1988-05-09 00:00:00

  • Serum starvation induces H2AX phosphorylation to regulate apoptosis via p38 MAPK pathway.

    abstract::Phosphorylation of H2AX is believed to be associated with the repair of damaged DNA. Recent findings suggest a novel function of H2AX in cellular apoptosis. Specifically, it was shown that ultraviolet A-activated JNK phosphorylates H2AX to regulate apoptosis. Here we show that serum starvation induces H2AX phosphoryla...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2008.06.051

    authors: Lu C,Shi Y,Wang Z,Song Z,Zhu M,Cai Q,Chen T

    更新日期:2008-08-06 00:00:00

  • Comparison of proline and N-methylnorleucine induced conformational equilibria in cyclic pentapeptides.

    abstract::The cyclic, imido acid containing pentapeptides cyclo(Asp-Trp-(NMe)Nle-Asp-Phe) (cpp[NMeNle(3)]) and cyclo(Asp-Trp-Pro-Asp-Phe) (cpp[Pro(3)]) have been investigated by 1H-NMR spectroscopy in DMSO and by restrained molecular dynamics methods. The spectra indicate the existence of at least four cis/trans isomers for cpp...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(96)00469-3

    authors: Weisshoff H,Wieprecht T,Henklein P,Frömmel C,Antz C,Mügge C

    更新日期:1996-06-03 00:00:00

  • Modulation of cardiac Ca2+ channels in Xenopus oocytes by protein kinase C.

    abstract::L-Type calcium channel was expressed in Xenopus laevis oocytes injected with RNAs coding for different cardiac Ca2+ channel subunits, or with total heart RNA. The effects of activation of protein kinase C (PKC) by the phorbol ester PMA (4 beta-phorbol 12-myristate 13-acetate) were studied. Currents through channels co...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)80980-u

    authors: Singer-Lahat D,Gershon E,Lotan I,Hullin R,Biel M,Flockerzi V,Hofmann F,Dascal N

    更新日期:1992-07-20 00:00:00

  • Structure-function relationships in the receptor for urokinase-type plasminogen activator. Comparison to other members of the Ly-6 family and snake venom alpha-neurotoxins.

    abstract::Plasminogen activation is regulated by the interaction between urokinase-type plasminogen activator (uPA) and its specific glycolipid-anchored cell surface receptor (uPAR). uPAR is composed of three homologous domains and is the only multi-domain member of the Ly-6 family of glycolipid-anchored membrane proteins. Rece...

    journal_title:FEBS letters

    pub_type: 杂志文章,评审

    doi:10.1016/0014-5793(94)00674-1

    authors: Ploug M,Ellis V

    更新日期:1994-08-01 00:00:00

  • Activation of c-Jun N-terminal kinase during ischemia and reperfusion in mouse liver.

    abstract::We have generated a mouse model for hepatic ischemia in which surgical subcutaneous transposition of the spleen allows hepatic ischemia to be applied without affecting other tissues. Using this mouse model we investigated the relationship between the length of ischemic periods in the liver and subsequent liver functio...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)01517-2

    authors: Onishi I,Tani T,Hashimoto T,Shimizu K,Yagi M,Yamamoto K,Yoshioka K

    更新日期:1997-12-29 00:00:00

  • Inhibition of the formation of amyloid beta-protein fibrils using biocompatible nanogels as artificial chaperones.

    abstract::The formation of fibrils by amyloid beta-protein (Abeta) is considered as a key step in the pathology of Alzheimer's disease (AD). Inhibiting the aggregation of Abeta is a promising approach for AD therapy. In this study, we used biocompatible nanogels composed of a polysaccharide pullulan backbone with hydrophobic ch...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2006.11.009

    authors: Ikeda K,Okada T,Sawada S,Akiyoshi K,Matsuzaki K

    更新日期:2006-12-11 00:00:00

  • Ghrelin inhibits insulin secretion through the AMPK-UCP2 pathway in beta cells.

    abstract::Ghrelin inhibits insulin secretion partly via induction of IA-2beta. However, the orexigenic effect of ghrelin is mediated by the AMP-activated protein kinase (AMPK)-uncoupling protein 2 (UCP2) pathway. Here, we demonstrate that ghrelin's inhibitory effect on insulin secretion also occurs through the AMPK-UCP2 pathway...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2010.02.069

    authors: Wang Y,Nishi M,Doi A,Shono T,Furukawa Y,Shimada T,Furuta H,Sasaki H,Nanjo K

    更新日期:2010-04-16 00:00:00

  • Selection for TRAIL resistance results in melanoma cells with high proliferative potential.

    abstract::To better understand the outcome of the interaction between TNF-related apoptosis-inducing factor (TRAIL) and tumor cells, we studied TRAIL-resistant melanoma cells resulting from prolonged exposure to TRAIL and found that they had higher proliferative activity than the parental cells both in vitro and in vivo. This w...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2005.02.041

    authors: Wu JJ,Zhang XD,Gillespie S,Hersey P

    更新日期:2005-03-28 00:00:00

  • Demonstration of cell-specific phosphorylation of LTC4 synthase.

    abstract::PMA-induced leukotriene C4 synthase (LTC4S) phosphorylation was investigated over a period of 8 h in a monocytic cell line (THP-1). The level of LTC4S phosphorylation was increased 3-5 fold over a 4 h period decreasing to basal levels after 8 h. This phosphorylation event was found to be specific to THP-1 cells as the...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00397-x

    authors: Gupta N,Nicholson DW,Ford-Hutchinson AW

    更新日期:1999-04-16 00:00:00

  • Platelet activating factor (PAF-acether) promotes an early degradation of phosphatidylinositol-4,5-biphosphate in rabbit platelets.

    abstract::32P-Labelled washed rabbit platelets were incubated with 0.6 nM platelet activating factor (PAF-acether), giving a full aggregation and release response within 30-60 s. The major phospholipid changes observed under these conditions were: (1) An increased labelling of phosphatidic acid (PA) within 10 s and of phosphati...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(83)80643-7

    authors: Mauco G,Chap H,Douste-Blazy L

    更新日期:1983-03-21 00:00:00

  • Identification of plasma membrane associated mature beta-hexosaminidase A, active towards GM2 ganglioside, in human fibroblasts.

    abstract::Mature beta-hexosaminidase A has been found associated to the external leaflet of plasma membrane of cultured fibroblasts. The plasma membrane association of beta-hexosaminidase A has been directly determined by cell surface biotinylation followed by affinity chromatography purification of the biotinylated proteins, a...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2005.08.081

    authors: Mencarelli S,Cavalieri C,Magini A,Tancini B,Basso L,Lemansky P,Hasilik A,Li YT,Chigorno V,Orlacchio A,Emiliani C,Sonnino S

    更新日期:2005-10-24 00:00:00

  • Structure of the large ribosomal subunit RNA of Phytophthora megasperma, and phylogeny of the oomycetes.

    abstract::The 5.8S and 28S rRNA sequences of the oomycete Phytophthora megasperma were determined in order to study the secondary structure of these molecules and to assess the phylogenetic position of the oomycetes among the eukaryotes. Preliminary results point to an affiliation between the oomycetes, dinoflagellates and cili...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)80350-1

    authors: Van der Auwera G,Chapelle S,De Wachter R

    更新日期:1994-01-31 00:00:00

  • Bacterial lectins, cell-cell recognition and infectious disease.

    abstract::Numerous bacterial strains produce surface lectins, commonly in the form of fimbriae that are filamentous assemblies of protein subunits. Among the best characterized of these are the type 1 (mannose specific) fimbrial lectins of Escherichia coli that consist almost exclusively of one class of subunit with a molecular...

    journal_title:FEBS letters

    pub_type: 杂志文章,评审

    doi:10.1016/0014-5793(87)80654-3

    authors: Sharon N

    更新日期:1987-06-15 00:00:00

  • Inhibition by interferon (alpha + beta) of mouse liver regeneration and its reversal by putrescine.

    abstract::Mouse interferon (alpha + beta) given to mice by intraperitoneal injection suppressed both the accumulation of putrescine and stimulation of DNA synthesis in liver caused by partial hepatectomy. The suppression of DNA synthesis was completely reversed by exogenous putrescine. The same results were obtained when core 2...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(86)80866-3

    authors: Nishiguchi S,Otani S,Matsui-Yuasa I,Morisawa S,Monna T,Kuroki T,Kobayashi K,Yamamoto S

    更新日期:1986-09-01 00:00:00

  • The algorithm of estimation of the Km values for primers of various structure and length in the polymerization reaction catalyzed by Klenow fragment of DNA polymerase I from E. coli.

    abstract::DNA synthesis at primers d(pT)n, d(pA)n, d(pC)n, and d(pG)n in the presence of corresponding complementary templates and at hetero-oligoprimers complementary to M13 phage DNA was investigated. The values of both -log Km and log Vmax increased linearly if homo-oligoprimers contained less than 10 nucleotides. The length...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(89)81642-4

    authors: Nevinsky GA,Nemudraya AV,Levina AS,Khomov VV

    更新日期:1989-11-20 00:00:00

  • Mitochondrial acyl carrier protein is involved in lipoic acid synthesis in Saccharomyces cerevisiae.

    abstract::The yeast gene, ACP1, encoding the mitochondrial acyl carrier protein, was deleted by gene replacement. The resulting acp1-deficient mutants had only 5-10% of the wild-type lipoic acid content remaining, and exhibited a respiratory-deficient phenotype. Upon meiosis, the lipoate deficiency co-segregated with the acp1 d...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00428-6

    authors: Brody S,Oh C,Hoja U,Schweizer E

    更新日期:1997-05-19 00:00:00

  • Retromer-mediated endosomal protein sorting: The role of unstructured domains.

    abstract::The retromer complex is a key element of the endosomal protein sorting machinery that is conserved through evolution and has been shown to play a role in diseases such as Alzheimer's disease and Parkinson's disease. Through sorting various membrane proteins (cargo), the function of retromer complex has been linked to ...

    journal_title:FEBS letters

    pub_type: 杂志文章,评审

    doi:10.1016/j.febslet.2015.05.052

    authors: Mukadam AS,Seaman MN

    更新日期:2015-09-14 00:00:00

  • Hybrid proteins between Pseudomonas exotoxin A and poliovirus protease 2Apro.

    abstract::Two hybrid proteins between Pseudomonas aeruginosa exotoxin A (PE) and poliovirus protease 2Apro have been generated. One hybrid protein contains the poliovirus 2Apro sequence replacing the region of PE corresponding to amino acids 413-607. The other hybrid contains in addition the transforming growth factor sequence....

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)01157-5

    authors: Novoa I,Feduchi E,Carrasco L

    更新日期:1994-11-21 00:00:00

  • Flexible docking of an amyloid-forming peptide from beta(2)-microglobulin.

    abstract::Using an all-atom, molecular dynamics-based, flexible docking method, the tertiary and quaternary structures of protofilaments of the "K3" fragment from beta(2)-microglobulin (residues Ser20-Lys41) were predicted at low pH in a continuous mixture of water and 2,2,2-trifluoroethanol (TFE). Tetramers with energies very ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2006.10.022

    authors: Standley DM,Yonezawa Y,Goto Y,Nakamura H

    更新日期:2006-11-13 00:00:00