Occurrence and identification of microorganisms in compacted clay-based buffer material designed for use in a nuclear fuel waste disposal vault.

Abstract:

:A full-scale nuclear fuel waste disposal container experiment was carried out 240 m below ground in an underground granitic rock research laboratory in Canada. An electric heater was surrounded by buffer material composed of sand and bentonite clay and provided heat equivalent to what is anticipated in a Canadian nuclear fuel waste repository. During the experiment, the heat caused a mass transport of water and moisture content gradients developed in the buffer ranging from 13% closest to the heater to 23% at the rock wall of the deposition hole. Upon decommissioning after 2.5 years, microorganisms could be cultured from all samples having a moisture content above 15% but not from samples with a moisture content below 15%. Heterotrophic aerobic and anaerobic bacteria were found in numbers ranging from 10(1) to 10(6) cells/g dry weight buffer. Approximately 10(2), or less, sulphate-reducing bacteria and methanogens per gram of dry weight buffer were also found. Identification of buffer population members was performed using Analytical Profile Index (API) strips for isolated bacteria and 16S rRNA gene sequencing for in situ samples. A total of 79 isolates from five buffer layers were identified with API strips as representing the beta, gamma and delta groups of Proteobacteria and Gram-positive bacteria. Sixty-seven 16S rRNA clones that were obtained from three buffer layers were classified into 21 clone groups representing alpha and gamma groups of Proteobacteria, Gram-positive bacteria, and a yeast. Approximately 20% of the population comprised Gram-positive bacteria. Members of the genera Amycolatopsis, Bacillus, and Nocardia predominated. Among Gram-negative bacteria, the genera Acinetobacter and Pseudomonas predominated. Analysis of lipid biomarker signatures and in situ leucine uptake demonstrated that the buffer population was viable. The results suggest that a nuclear fuel waste buffer will be populated by active microorganisms only if the moisture content is above a value where free water is available for active life.

journal_name

Can J Microbiol

authors

Stroes-Gascoyne S,Pedersen K,Haveman SA,Dekeyser K,Arlinger J,Daumas S,Ekendahl S,Hallbeck L,Hamon CJ,Jahromi N,Delaney TL

doi

10.1139/m97-162

subject

Has Abstract

pub_date

1997-12-01 00:00:00

pages

1133-46

issue

12

eissn

0008-4166

issn

1480-3275

journal_volume

43

pub_type

杂志文章
  • Molecular identification of Neofabraea species associated with bull's-eye rot on apple using rolling-circle amplification of partial EF-1α sequence.

    abstract::A rolling-circle amplification (RCA) method with padlock probes targeted on EF-1α regions was developed for rapid detection of apple bull's-eye rot pathogens, including Neofabraea malicorticis, N. perennans, N. kienholzii, and N. vagabunda (synonym: N. alba). Four padlock probes (PLP-Nm, PLP-Np, PLP-Nk, and PLP-Nv) we...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2017-0448

    authors: Lin H,Jiang X,Yi J,Wang X,Zuo R,Jiang Z,Wang W,Zhou E

    更新日期:2018-01-01 00:00:00

  • Comparison of selective media for the enumeration and identification of fecal streptococci from natural sources.

    abstract::Five media and procedures were compared for their recovery of fecal streptococci on membrane filters. Growth and numbers of a variety of pure cultures were compared, and recoveries from raw sewage and sewage effluent were determined on the five media. A total of 512 isolates were identified and the specificity of each...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m80-219

    authors: Pagel JE,Hardy GM

    更新日期:1980-11-01 00:00:00

  • Pulsed-field gel electrophoresis applied for comparing Listeria monocytogenes strains involved in outbreaks.

    abstract::Recent food-borne outbreaks of human listeriosis as well as numerous sporadic cases have been mainly caused by Listeria monocytogenes serovar 4b strains. Thus, it was of interest to find out whether a certain clone or a certain few clones were responsible for these cases and especially for outbreaks. We used pulsed-fi...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m93-058

    authors: Buchrieser C,Brosch R,Catimel B,Rocourt J

    更新日期:1993-04-01 00:00:00

  • Inactivation of human adenovirus by sequential disinfection with an alternative ultraviolet technology and monochloramine.

    abstract::In an effort to reduce human exposure to adenoviruses through drinking water, we determined the effectiveness of sequential disinfection with an alternative ultraviolet (UV) technology (medium-pressure (MP) UV) and monochloramine. The results of this study showed that MP UV was much more effective than traditional UV ...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w10-047

    authors: Shin GA,Lee JK

    更新日期:2010-07-01 00:00:00

  • Evaluating the risks associated with Shiga-toxin-producing Escherichia coli (STEC) in private well waters in Canada.

    abstract::Shiga-toxin-producing Escherichia coli (STEC) represent a major concern for waterborne disease outbreaks associated with consumption of contaminated groundwater. Over 4 million people rely on private groundwater systems as their primary drinking water source in Canada; many of these systems do not meet current standar...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章,评审

    doi:10.1139/cjm-2019-0329

    authors: Reynolds C,Checkley S,Chui L,Otto S,Neumann NF

    更新日期:2020-05-01 00:00:00

  • Genome structure of Halobacterium halobium: plasmid dynamics in gas vacuole deficient mutants.

    abstract::Halobacterium halobium contains two gas vacuole protein genes that are located in plasmid pHH1 (p-vac) and in the chromosomal DNA (c-vac). The mutation frequency for these genes is different: the constitutively expressed p-vac gene is mutated with a frequency of 10(-2), while the chromosomal gene expressed in the stat...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m89-015

    authors: Pfeifer F,Blaseio U,Horne M

    更新日期:1989-01-01 00:00:00

  • B subunit of Escherichia coli heat-labile enterotoxin as adjuvant of humoral immune response in recombinant BCG vaccination.

    abstract::The B subunit of Escherichia coli heat-labile enterotoxin (LTB), a nontoxic molecule with potent biological properties, is a powerful mucosal and parenteral adjuvant that induces a strong immune response against co-administered or coupled antigens. In this paper, the effect of LTB on the humoral immune response to rec...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w08-056

    authors: da Silva Ramos Rocha A,Conceição FR,Grassmann AA,Lagranha VL,Dellagostin OA

    更新日期:2008-08-01 00:00:00

  • Production of alkaline phosphatase by epithelial cells and adherent bacteria of the bovine rumen and abomasum.

    abstract::Three distinct bacterial populations have been defined in the bovine rumen: the rumen fluid population; the population associated with food particles; and the population adherent to the rumen epithelium. Alkaline phosphatase activity has been reported in cells of the first two populations and here we report that assay...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m79-140

    authors: Fay JP,Cheng KJ,Costerton JW

    更新日期:1979-08-01 00:00:00

  • A potential role of Escherichia coli pathobionts in the pathogenesis of pediatric inflammatory bowel disease.

    abstract::Through genomic analysis of mucosa-associated Escherichia coli strains, we found a close genetic association among isolates from pediatric inflammatory bowel disease (IBD) patients. A specific E. coli pathovar, adherent-invasive E. coli (AIEC), was found in Crohn's disease (CD) adult patients - this pathovar has enhan...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w2012-007

    authors: Schippa S,Iebba V,Totino V,Santangelo F,Lepanto M,Alessandri C,Nuti F,Viola F,Di Nardo G,Cucchiara S,Longhi C,Conte MP

    更新日期:2012-04-01 00:00:00

  • Composition and properties of the cell wall of Methanospirillum hungatii.

    abstract::Dithiothreitol reacted, at pH 9.0, with the isolated cell walls of Methanospirillum hungatii, to release about 23% of the cell wall dry weight as a high molecular weight fraction (> 0.5 million daltons). Untreated walls consisted of 70% amino acids, 11% lipid, and 6.6% carbohydrate. Sugars were identified as rhamnose,...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m80-017

    authors: Sprott GD,McKellar RC

    更新日期:1980-02-01 00:00:00

  • Characterization of mutants of herpes simplex viruses, types 1 and 2, that produce fragments of the thymidine kinase polypeptide.

    abstract::Seven tk- mutants of herpes simplex virus, type 2 (HSV-2), and three tk- mutants of herpes simplex virus, type 1 (HSV-1), were isolated which did not produce the thymidine kinase (TK) polypeptides but formed smaller polypeptides not seen in wild-type infected cells. Positive TK mRNA selection by hybridization to the c...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m83-063

    authors: Block TM,Kuhn NJ,Kustas KA,Held WA,Gross K,Hughes RG Jr

    更新日期:1983-04-01 00:00:00

  • The role of rpoS on the survival of a p-nitrophenol degrading Pseudomonas putida strain in planktonic and biofilm phases.

    abstract::The survival of and interactions between a Pseudomonas putida strain labelled with a red fluorescent protein gene (WT-rfp) and its green fluorescent protein gene-labelled rpoS(-) mutant (KO-gfp) were examined. The generation times of the planktonic WT-rfp and KO-gfp in trypticase soy broth were not significantly diffe...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w09-081

    authors: Maki ML,Lawrence JR,Swerhone GD,Leung KT

    更新日期:2009-10-01 00:00:00

  • BaeR protein acts as an activator of nuclear factor-kappa B and Janus kinase 2 to induce inflammation in murine cell lines.

    abstract::BaeR, a response regulator protein, takes part in multidrug efflux, bacterial virulence activity, and other biological functions. Recently, BaeR was shown to induce inflammatory responses by activating the mitogen-activated protein kinases (MAPKs). In this study, we investigated additional pathways used by BaeR to ind...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2016-0057

    authors: Lee SJ,Birhanu BT,Awji EG,Kim MH,Park JY,Suh JW,Park SC

    更新日期:2016-09-01 00:00:00

  • In vitro transduction of antimicrobial resistance genes into Escherichia coli isolates from backyard poultry in Mexico.

    abstract::The transmission of multi-drug resistant pathogens and antimicrobial-resistant genes is an arising problem with multiple factors involved (humans, domestic animals, wildlife). The aim of this study was to investigate the presence of Escherichia coli isolates with different antimicrobial resistance genes from backyard ...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2020-0280

    authors: Talavera-Gonzalez JM,Talavera-Rojas M,Soriano-Vargas E,Vazquez-Navarrete J,Salgado-Miranda C

    更新日期:2021-01-04 00:00:00

  • Evaluation of beta-glucuronidase assay for the detection of Escherichia coli from environmental waters.

    abstract::The new United States Drinking Water Regulations state that water systems must analyze for Escherichia coli or fecal coliforms on any routine or repeat sample that is positive for total coliforms. The proposed methods for the detection of E. coli are based on beta-glucuronidase activity, using the fluorogenic substrat...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m91-157

    authors: Shadix LC,Rice EW

    更新日期:1991-12-01 00:00:00

  • Characterization of diacetin B, a bacteriocin from Lactococcus lactis subsp. lactis bv. diacetylactis UL720.

    abstract::Fourteen Lactococcus lactis strains showing inhibitory activity against Listeria innocua SICC 4202 were isolated from different French raw milks and raw milk cheeses and screened for bacteriocin production by the triple layer method under conditions that eliminate the effects of lactic acid and hydrogen peroxide. Thre...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m95-114

    authors: Ali D,Lacroix C,Thuault D,Bourgeois CM,Simard RE

    更新日期:1995-09-01 00:00:00

  • Immunosuppression, nonspecific B-cell activation, and mitogenic activity associated with a high molecular weight component from Listeria monocytogenes.

    abstract::A high molecular component of a saline extract derived from Listeria monocytogenes contained amino acids, carbohydrates, and phosphorus. The same fraction was capable of promoting both the in vitro mitogenic and adjuvant activities and the in vivo immunosuppressive activity displayed by the crude extract. The material...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m82-204

    authors: Otokunefor TV,Galsworthy SB

    更新日期:1982-12-01 00:00:00

  • Induction of resistance in Mycobacterium smegmatis.

    abstract::In this work, we assayed the ability of newly prepared indolizine derivates (epimers) 6C and 6A to inhibit the growth of Mycobacterium smegmatis and used them for resistance induction. 6A inhibited the growth of M. smegmatis at a concentration of 100 μg/mL. No inhibitory effect was observed in the presence of 6C. By i...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2012-0438

    authors: Olejníková P,Kurucová M,Švorc L,Marchalín Š

    更新日期:2013-02-01 00:00:00

  • Effect of a Vietnamese Cinnamomum cassia essential oil and its major component trans-cinnamaldehyde on the cell viability, membrane integrity, membrane fluidity, and proton motive force of Listeria innocua.

    abstract::The antibacterial mechanism of a Cinnamomum cassia essential oil from Vietnam and of its main component (trans-cinnamaldehyde, 90% (m/m) of C. cassia essential oil) against a Listeria innocua strain was investigated to estimate their potential for food preservation. In the presence of C. cassia essential oil or trans-...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2014-0481

    authors: Trinh NT,Dumas E,Thanh ML,Degraeve P,Ben Amara C,Gharsallaoui A,Oulahal N

    更新日期:2015-04-01 00:00:00

  • Morphologic and functional effects of Clostridium difficile enterotoxin in tissue culture.

    abstract::The effects of the Clostridium difficile toxin were examined in HeLa and mouse adrenal tumor (MAT) cells. Cytotoxicity was evaluated by vital dye exclusion and 51Cr release. In both HeLa and MAT cells, C. difficile toxin caused rounding of virtually 100% of cells. This rounding was distinguishable from rounding produc...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m82-009

    authors: Gurwith MJ,Langston C,Dunsmore B

    更新日期:1982-01-01 00:00:00

  • Stress-survival responses of a carbon-starved p-nitrophenol-mineralizing Moraxella strain in river water.

    abstract::The effect of carbon starvation on the stress-resistant responses of a p-nitrophenol-mineralizing Moraxella strain was examined in both buffer and river water samples. The Moraxella strain showed optimal stress-resistant responses in a minimal salt buffer when carbon-starved for 1-2 d. In the buffer system, the 1- and...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w04-131

    authors: Moore M,Trevors J,Lee H,Leung KT

    更新日期:2005-03-01 00:00:00

  • Preliminary report on the observation of a coronavirus in the intestine of the laboratory rabbit.

    abstract::Intestinal infections are a major cause of mortality in domestic rabbits. Although a few pathogenic organisms have been associated with this type of infection, it is often impossible to demonstrate the presence of any etiologic agents. Recently viral particles were observed in the intestine of diseased rabbits submitt...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m80-201

    authors: Lapierre J,Marsolais G,Pilon P,Descôteaux JP

    更新日期:1980-10-01 00:00:00

  • Minute tubular forms in soil.

    abstract::Large numbers of minute, flat, long, straight, but often broken structures were observed in aqueous extracts of soil. We have applied the purely descriptive term 'tubules' to these structure, because they apparently became flattened during preparation for electron-microscopic viewing. The tubules appeared to be compos...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m79-105

    authors: Casida LE Jr,Liu KC

    更新日期:1979-06-01 00:00:00

  • Growth responses of Neisseria gonorrhoeae auxotypes to required amino acids and bases in liquid medium.

    abstract::Neisseria gonorrhoeae strains can be grouped or differentiated (auxotyped) by their requirements for none, or any one or more of proline, uracil, hypoxanthine, and citrulline or ornithine. Most strains were readily assessed because they responded with growth or no growth on each defined auxanographic medium. Other str...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m83-204

    authors: Hendry AT

    更新日期:1983-10-01 00:00:00

  • Effects of the herbicides fluometuron and prometryn of Rhizoctonia solani in soil cultures.

    abstract::Responses of Rhizoctonia solani to herbicides in soil cultures were assessed by measuring soil enzyme activity and other growth-related factors. Both beta-galactosidase (EC 3.2.1.23) and phosphatase (EC 3.1.3.1.3.1.3.2) activities were highly correlated with amounts of mycelium in soil. Both enzyme activities were red...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m77-089

    authors: Beam HW,Curl EA,Rodriguez-Kabana R

    更新日期:1977-05-01 00:00:00

  • Bacteriophage lambda repressor allelic modulation of the Rex exclusion phenotype.

    abstract::The sensitivity of delta red-gam delta ren mutants of bacteriophage lambda to Rex exclusion by lambda rexA+ rexB+ lysogens is modulated by the prophage cI repressor allele. We show the following: (i) lambda spi156 delta nin5 forms plaques on a cI+-rexA+-rexB+ lysogen with 10(5)-fold higher efficiency than on cI[Ts]-re...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/w03-021

    authors: Slavcev RA,Bull HJ,Hayes S

    更新日期:2003-03-01 00:00:00

  • Production of Brucella melitensis Omp16 protein fused to the human interleukin 2 in Lactococcus lactis MG1363 toward developing a Lactococcus-based vaccine against brucellosis.

    abstract::The use of the food-grade bacterium Lactococcus lactis as a new cell factory is a promising alternative expression system for producing a desired protein. The Omp16-IL2 fusion protein antigen was cloned, expressed, and purified in this study. The Omp16-IL2 fusion gene was designed and cloned in pGH plasmid with approp...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2019-0261

    authors: Rezaei M,Rabbani Khorasgani M,Zarkesh Esfahani SH,Emamzadeh R,Abtahi H

    更新日期:2020-01-01 00:00:00

  • Mycotoxin production by Chaetomium spp. and related fungi.

    abstract::Screening for mycotoxin production by Chaetomium spp. and related fungi on rice culture was conducted by a combination of cytotoxicity tests using HeLa cells and thin-layer chromatography. Producers of sterigmatocystin, O-methylsterigmatocystin, chaetochromin, chaetocin, chetomin, cochliodinols, and mollicellin G were...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/m81-119

    authors: Sekita S,Yoshihira K,Natori S,Udagawa S,Muroi T,Sugiyama Y,Kurata H,Umeda M

    更新日期:1981-08-01 00:00:00

  • Soil microbial communities of three grassland ecosystems in the Bayinbuluke, China.

    abstract::The microbial community plays an important role in soil nutrient cycles and energy transformations in alpine grassland. In this study, we investigated the composition of the soil microbial community collected from alpine cold swamp meadow (ASM), alpine cold meadow (AM), and alpine cold desert steppe (ADS) within the B...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2017-0585

    authors: Shao K,Gao G

    更新日期:2018-03-01 00:00:00

  • Temporal variation in the prevalence and species richness of Campylobacter spp. in a prairie watershed impacted by urban and agricultural mixed inputs.

    abstract::Campylobacter spp. are a substantial cause of gastroenteritis worldwide. Human infection can result from ingestion of contaminated food or water from a variety of sources, including the consumption of fresh produce that is contaminated with the pathogen via the use of contaminated irrigation water. Using molecular met...

    journal_title:Canadian journal of microbiology

    pub_type: 杂志文章

    doi:10.1139/cjm-2015-0710

    authors: Tambalo DD,Boa T,Aryal B,Yost CK

    更新日期:2016-05-01 00:00:00