Amino acid residue: is it structural or functional?

Abstract:

:A new approach is suggested for delineating the structural and functional amino acid residues in proteins with known three-dimensional structure, basing on the involvement of residues in intramolecular hydrophobic and hydrophilic interactions and additional information about the conservativity of the residues. The approach is applied to the families of homologous neurotoxins and cardiotoxins. The results obtained concerning the role of amino acid residues in both families of toxins accord well with the similarity of their fold, but different mechanisms of action. Current approach can be used for detailed characterization of protein spatial structures, as well as for rational protein engineering.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Golovanov AP,Efremov RG,Jaravine VA,Vergoten G,Arseniev AS

doi

10.1016/0014-5793(95)01212-w

subject

Has Abstract

pub_date

1995-11-13 00:00:00

pages

162-6

issue

1-2

eissn

0014-5793

issn

1873-3468

pii

0014-5793(95)01212-W

journal_volume

375

pub_type

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