Candidate gene approach: potentional association of caspase-1, inhibitor of apoptosis protein-1, and prosaposin gene polymorphisms with response to Salmonella enteritidis challenge or vaccination in young chicks.

Abstract:

:Salmonella enteritidis (SE) contamination of poultry products is a major cause of foodborne disease worldwide. Caspase-1 and inhibitor of apoptosis protein-1 (IAP-1) were selected as candidate genes for chicken response to SE because their proteins play critical roles in the apoptotic pathway when intracellular bacteria interact with host cells. Prosaposin (PSAP) was selected as a positional candidate gene based on a previous quantitative trait loci (QTL) linkage study using the same population. The F1 offspring of outbred sires crossed with three diverse, highly inbred dam lines (two major histocompatibility complex-congenic Leghorn lines named G-B1 and G-B2, and one Fayoumi line) were used to define the phenotypes. The F1 birds were involved in either pathogenic SE challenge, in which spleen and cecum content bacterial load were quantified, or SE vaccination, in which plasma antibody level to SE vaccine was evaluated. A polymerase chain reaction-restriction fragment length polymorphisms (PCR-RFLP) assay was developed to identify single-nucleotide polymorphism (SNP) in the three genes. The F1 offspring of heterozygous sires for each gene were genotyped. The sire caspase-1 gene was significantly associated with cecum content bacterial load (P = 0.04) in the three combined dam line crosses, and with spleen bacterial load in the G-B1 cross (P=0.02). The sire caspase-1 gene was also significantly associated with antibody level to SE vaccine (P=0.03) in F1 males in the three combined dam line crosses. The sire IAP-1 gene was significantly associated with spleen bacterial load (P=0.04) in the three combined dam-line crosses, and interacted with dam-line genetics (P = 0.01) for cecum content bacterial load. The sire PSAP gene significantly interacted with sex for spleen bacterial load (P = 0.004). This study is the first to demonstrate the association of SNPs for caspase-1, IAP-1, and PSAP genes with SE vaccine and with pathogen challenge response in chickens.

journal_name

Anim Biotechnol

journal_title

Animal biotechnology

authors

Liu W,Lamont SJ

doi

10.1081/ABIO-120022136

keywords:

subject

Has Abstract

pub_date

2003-05-01 00:00:00

pages

61-76

issue

1

eissn

1049-5398

issn

1532-2378

journal_volume

14

pub_type

杂志文章
  • FTO Promotes Adipogenesis through Inhibition of the Wnt/β-catenin Signaling Pathway in Porcine Intramuscular Preadipocytes.

    abstract::Numerous studies have demonstrated that FTO plays an important role in adipogenesis. Herein, we designed a small interfering RNA targeting FTO to knock down its endogenous expression and investigated its effects on the proliferation and differentiation of porcine intramuscular preadipocytes. Its possible mechanism was...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2016.1273835

    authors: Chen X,Luo Y,Jia G,Liu G,Zhao H,Huang Z

    更新日期:2017-10-02 00:00:00

  • The effect of retroviral vector on uptake of human lactoferrin DNA by Yak (Bos Grunniens) spermatozoa and their fertilizability in vitro.

    abstract::The objectives of this study were to evaluate the transfection effectiveness of retroviral vector PLNCX2 in yak sperm-mediated gene transfer (SMGT) and the effect of SMGT on sperm motility and fertilizability. Human lactoferrin (hLF) DNA was ligated into PLNCX2 to construct recombinant plasmid PLNCX2-hLF, then, using ...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495390903196455

    authors: Zi XD,Chen SW,Liang GN,Chen DW,Zhang DW,Yin RH

    更新日期:2009-01-01 00:00:00

  • Investigation of tissue-specific human orthologous alternative splice events in pig.

    abstract::Alternative splicing of pre-mRNA can contribute to differences between tissues or cells either by regulating gene expression or creating proteins with various functions encoded by one gene. The number of investigated alternative splice events in pig has so far been limited. In this study we have investigated alternati...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2010.497729

    authors: Nygard AB,Jørgensen CB,Cirera S,Fredholm M

    更新日期:2010-10-01 00:00:00

  • SNaPshot minisequencing and a panel of candidate genes for complex routine testing of meat performance traits in pigs.

    abstract::The aim of the study was to introduce a convenient method for identification of differences among individual animals in genes supposed to influence meat performance in pigs. The set of seven candidate genes (IGF2, FOS, MC4R, DGAT1, MYF4, MYF, and MC3R) was used. To determine the genotypes, multiplex polymerase chain r...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495390601088657

    authors: Civánová K,Knoll A

    更新日期:2007-01-01 00:00:00

  • Assessment of the nucleotide sequence variability in the bovine T-cell receptor alpha delta joining gene region.

    abstract::The sequence of 2,193 nucleotides from the bovine T-cell receptor alpha/delta joining gene region (TCRADJ) was determined and compared with the corresponding human and murine sequences. The identity was 75.3% for the comparison of the Bos taurus vs. the Homo sapiens sequence and 63.8% for the Bos taurus vs. the Mus mu...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1081/abio-100102977

    authors: Fries R,Ewald D,Thaller G,Buitkamp J

    更新日期:2001-05-01 00:00:00

  • Analysis of association between the MUC4 g.8227C>G polymorphism and production traits in Italian heavy pigs using a selective genotyping approach.

    abstract::In pigs, susceptibility to enterotoxigenic Escherichia coli (ETEC) K88 strains (locus F4bcR) is determined by a dominant allele, with the recessive allele determining resistance. The susceptible allele also appeared to be associated with higher growth rate even with discordant results. A single nucleotide polymorphism...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2011.653462

    authors: Fontanesi L,Bertolini F,Dall'Olio S,Buttazzoni L,Gallo M,Russo V

    更新日期:2012-01-01 00:00:00

  • Transcriptome profiling of in vitro-matured oocytes from a korean native cow (hanwoo) after cysteamine supplementation.

    abstract::This study elucidated the molecular markers that decrease oocyte quality during in vitro culture, restricting optimal developmental potential. Here, we evaluated the transcriptomic differences between cysteamine-treated and non-treated bovine cumulus oocyte complexes (COCs) after 22 h of co-culture in the maturation m...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2019.1706545

    authors: Chowdhury MMR,Park J,Afrin F,Ko YG,Kim CL,Lee SS,Kim SW

    更新日期:2020-01-03 00:00:00

  • Association of genetic variability in CD209 gene with bovine paratuberculosis disease: a case-control study in the Indian cattle population.

    abstract::This study aimed to explore the association of single nucleotide polymorphisms (SNPs) in CD209 gene with the occurrence of bovine paratuberculosis (PTB) disease caused by Mycobacterium avium subspecies paratuberculosis (MAP) in Indian cattle. A total of 213 animals were preliminarily selected on the basis of physical ...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2020.1823400

    authors: Kumar S,Kumar S,Singh RV,Chauhan A,Kumar A,Bharati J,Singh SV

    更新日期:2020-09-28 00:00:00

  • Molecular Characterization of Equine APRIL and its Expression Analysis During the Adipogenic Differentiation of Equine Adipose-Derived Stem Cell In Vitro.

    abstract::A proliferation inducing ligand (APRIL) is a member of the TNF superfamily. It shares two receptors with B-cell activating factor (BAFF), B-cell maturation antigen (BCMA), and transmembrane activator and CAML interactor (TACI). Herein, the equine APRIL was identified from equine adipose-derived stem cell (ASC), and th...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2016.1182540

    authors: Wu H,Bi X,Cao F,Zhu C,Liu H,Song J,Ma L,Ma L,Zhang Y,Zhao D,Liu H,Xu X,Zhang S

    更新日期:2016-10-01 00:00:00

  • Alternative splicing of testis-specific lactate dehydrogenase C gene in mammals and pigeon.

    abstract::The objective of the present study was to confirm the widespread existence of alternative splicing of lactate dehydrogenase c (ldhc) gene in mammals. RT-PCR was employed to amplify cDNAs of ldhc from testes of mammals including pig, dog, rabbit, cat, rat, and mouse, as well as pigeon. Two to six kinds of splice varian...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2011.652325

    authors: Huang L,Lin Y,Jin S,Liu W,Xu Y,Zheng Y

    更新日期:2012-04-01 00:00:00

  • A 3800 gene microarray for cattle functional genomics: comparison of gene expression in spleen, placenta, and brain.

    abstract::A cDNA microarray representing approximately 3800 cattle genes was created for functional genomic studies. The array elements were selected from > 7000 cDNA clones identified in a large-scale expressed sequence tag (EST) project that utilized spleen and normalized and subtracted placenta cDNA libraries. Sequence simil...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1081/ABIO-120005779

    authors: Band MR,Olmstead C,Everts RE,Liu ZL,Lewin HA

    更新日期:2002-05-01 00:00:00

  • Isolation of thirty-one new porcine microsatellites from a microsatellite enriched microdissected chromosome 8 library.

    abstract::Chromosome 8 (SSC8) is an important one in the swine genome because it has been shown to harbor several economically important quantitative trait loci (QTL). The entire porcine chromosome 8 was microdissected and amplified by degenerate oligonucleotide primer (DOP) PCR. The PCR product was then enriched for (CA)n micr...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495390009525945

    authors: Wang Z,Rohrer G,Stone R,Troyer D

    更新日期:2000-01-01 00:00:00

  • Effects of Recombinant Human Lactoferrin on Osteoblast Growth and Bone Status in Piglets.

    abstract::Lactoferrin (LF), an ~80 kDa iron-binding glycoprotein, modulates many biological effects, including antimicrobial and immunomodulatory activities. Recently, it was shown that LF also regulates bone cell activity, suggesting its therapeutic effect on postmenopausal bone loss. However, a minimal amount is known regardi...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2017.1313269

    authors: Li Q,Zhao J,Hu W,Wang J,Yu T,Dai Y,Li N

    更新日期:2018-04-03 00:00:00

  • Association of BF, RBP4, and ESR2 Genotypes with Litter Size in an Autochthonous Pig Population.

    abstract::The aim of the present study was to determine any potential association of the BF, RBP4, and ESR2 genes with reproduction traits in an autochthonous Greek pig population. The PCR-RFLP methodology was implemented for genotyping purposes of the examined genes. No deviation from the Hardy-Weinberg equilibrium was observe...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2016.1242490

    authors: Laliotis GP,Marantidis A,Avdi M

    更新日期:2017-04-03 00:00:00

  • Harvesting the genomic promise: recombineering sequences for phenotypes.

    abstract::The past decade has witnessed the construction of linkage and physical maps defining quantitative trait loci (QTL) in various domesticated species. Targeted chromosomal regions are being further characterized through the construction of bacterial artificial chromosome (BAC) contigs in order to isolate and characterize...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1081/ABIO-120026481

    authors: Rogatcheva MB,Rund LA,Beever JE,Schook LB

    更新日期:2003-11-01 00:00:00

  • Polymorphic Microsatellite Markers for Solen grandis and Their Cross-Species Amplification in Three Other Species.

    abstract::The grand jackknife clam Solen grandis is a commercially important mollusk species, but has been suffering from severe population decline due to over-exploitation and habitat destruction in China. To promote a conservation program for this species, it is necessary to evaluate its genetic diversity and population genet...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2017.1367690

    authors: Nie H,Jiang L,Gao Y,Xu H,Du S,Yan X

    更新日期:2019-01-01 00:00:00

  • Association of the porcine transforming growth factor beta type I receptor (TGFBR1) gene with growth and carcass traits.

    abstract:BACKGROUND:Growth and carcass traits are of great economic importance in livestock production. A large number of quantitative trait loci (QTL) have been identified for growth and carcass traits on porcine chromosome one (SSC1). A key positional candidate for this chromosomal region is TGFBR1 (transforming growth factor...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2011.630897

    authors: Chen K,Hawken R,Flickinger GH,Rodriguez-Zas SL,Rund LA,Wheeler MB,Abrahamsen M,Rutherford MS,Beever JE,Schook LB

    更新日期:2012-01-01 00:00:00

  • Subcellular Localization and Polymorphism of Bovine FABP4 in Bovine Intramuscular Adipocytes.

    abstract::Fatty acid binding protein 4 (FABP4) I74 V, a gene polymorphism associated with unsaturated fatty acid contents, was discovered in Japanese Black cattle. Individuals with FABP4 I/I genotype contain a significantly high level of palmitoleic acid compared to those with FABP4 V/V genotype. It remains unknown how the FABP...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2015.1102148

    authors: Yonekura S,Hirota S,Miyazaki H,Tokutake Y

    更新日期:2016-01-01 00:00:00

  • Molecular Characterization, Polymorphism, and Association of Porcine GADD45G Gene.

    abstract::Growth arrest and DNA-damage-inducible gamma (GADD45G) is a reproduction related gene. In this study, the full-length cDNA sequence of porcine GADD45G gene was cloned through rapid amplification of cDNA ends (RACE) method. The porcine GADD45G gene encodes a protein of 159 amino acids that shares high homology with the...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2015.1005216

    authors: Liu C,Zhang W,Yang D,Liu Y

    更新日期:2015-01-01 00:00:00

  • Identification of sequence tagged sites in the Asian and African elephant.

    abstract::To date, gene identification in elephants has essentially related to evolutionary studies. Further identification of genes in elephants could provide additional information for evolutionary studies and for evaluating genetic diversity in existing elephant populations. The objective of this project was to identify sequ...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495399809525902

    authors: Burk NE,Messer LA,Ernst CW,Rothschild MF

    更新日期:1998-01-01 00:00:00

  • Analysis of allele segregation distortion in a swine resource family.

    abstract::Segregation distortion of alleles was found in several regions of the genome in allele type analyses of genetic markers for a swine resource family that had been constructed by crossing Göttingen miniature pig and Meishan breeds. From these regions, a region on chromosome 6 presented a distortion over several consecut...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495399909525939

    authors: Yasue H,Mikawa S,Uenishi H,Wada Y

    更新日期:1999-01-01 00:00:00

  • Maternal origin and genetic diversity of Algerian domestic chicken (Gallus gallus domesticus) from North-Western Africa based on mitochondrial DNA analysis.

    abstract::Local chicken populations are a major source of food in the rural areas of Algeria. However, their origin has not been well characterized. The objectives of this study were to assess genetic diversity and maternal origin of domestic chicken from five agro-ecological regions of western Algeria: coastal (CT), inland pla...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2020.1803892

    authors: Boudali SF,Al-Jumaili AS,Bouandas A,Mahammi FZ,Tabet Aoul N,Hanotte O,Gaouar SBS

    更新日期:2020-08-13 00:00:00

  • Somatostatin can alter fertility genes expression, oocytes maturation, and embryo development in cattle.

    abstract::This study was designed to investigate the effect of somatostatin on oocytes maturation and subsequent embryo development in cattle. Bovine granulosa cells separated from oocytes, cultured for 24 h and transfected with pEGFP-N1 vector with mouse SST gene (Experimental) and with out plasmid transfection (Control). RT-P...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495390902996723

    authors: Moaeen-ud-Din M,Malik N,Yang LG

    更新日期:2009-01-01 00:00:00

  • Evaluation of real-time PCR as an alternative for potency testing of Brucella abortus vaccines.

    abstract::The aim of the research was to evaluate real-time PCR (qPCR) as an alternate method for quantitative detection of Brucella abortus strain 544 (S544) in the spleen of mice for potency testing of live B. abortus strain 19 (S19) vaccine. IS711 and eryC gene-based qPCR were optimized for calculating copy number. The copy ...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2020.1735404

    authors: Gupta T,Rawat M,Kumar B,Varshney R,Chakravarti S,Qureshi S

    更新日期:2020-04-02 00:00:00

  • Combined Haplotypes of CaSR Gene Sequence Variants and Their Associations with Growth Traits in Cattle.

    abstract::The calcium-sensing receptor (CaSR) is a Class C G-protein coupled receptor that regulates food intake and assimilation. However, studies on the relationship between CaSR gene and growth traits in cattle are deficient. The aim of this study was to examine the association of the CaSR polymorphism with growth traits in ...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2016.1271805

    authors: Yue B,Han F,Wu J,Wang Y,Zhang C,Fang X,Qi X,Bai Y,Chen H

    更新日期:2017-10-02 00:00:00

  • Next generation semiconductor based-sequencing of a nutrigenetics target gene (GPR120) and association with growth rate in Italian Large White pigs.

    abstract::The GPR120 gene (also known as FFAR4 or O3FAR1) encodes for a functional omega-3 fatty acid receptor/sensor that mediates potent insulin sensitizing effects by repressing macrophage-induced tissue inflammation. For its functional role, GPR120 could be considered a potential target gene in animal nutrigenetics. In this...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2014.881369

    authors: Fontanesi L,Bertolini F,Scotti E,Schiavo G,Colombo M,Trevisi P,Ribani A,Buttazzoni L,Russo V,Dall'Olio S

    更新日期:2015-01-01 00:00:00

  • Molecular characterization and different expression patterns of the muscle ankyrin repeat protein (MARP) family during porcine skeletal muscle development in vitro and in vivo.

    abstract::CARP, ANKRD2, and DARP belong to the ankyrin repeat protein (MARP) family and play a critical role in the integration of cytoskeletal architecture, stress response, and transcriptional regulation. In this study, we cloned the cDNA and promoter sequences of porcine ankyrin repeat protein (MARP) gene family. RT-PCR anal...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495398.2011.559562

    authors: Wang L,Lei M,Xiong Y

    更新日期:2011-04-01 00:00:00

  • SSCP analysis at the bovine CSN3 locus discriminates six alleles corresponding to known protein variants (A, B, C, E, F, G) and three new DNA polymorphisms (H, I, A1).

    abstract::A high resolution SSCP protocol was developed for simultaneous discrimination of the known CSN3 alleles A, B, C, E, F and G. Furthermore, three new DNA polymorphisms were identified in different Bos taurus and Bos indicus breeds or crosses. Mendelian segregation was shown for two of these polymorphisms (named CSN3*H a...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495399909525921

    authors: Prinzenberg EM,Krause I,Erhardt G

    更新日期:1999-01-01 00:00:00

  • Identification of differentially expressed genes associated with osteochondrosis in standardbred horses using RNA arbitrarily primed PCR.

    abstract::The aim of this study was to investigate genes for differential expression in cartilage of foals predisposed to osteochondrosis (OC). Tissue was sampled from the cranial part of the distal intermediate ridge of the tibia in the tarso-crural joint. Foals were considered predisposed to OC when parents had OC at the dist...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1080/10495391003608316

    authors: Austbø L,Røed KH,Dolvik NI,Skretting G

    更新日期:2010-04-01 00:00:00

  • Cloning of bovine pyruvate carboxylase and 5' untranslated region variants.

    abstract::Bovine pyruvate carboxylase (PC; EC 6.4.1.1) cDNA was cloned by reverse transcription (RT) PCR. The coding region plus 3' untranslated region (UTR) of PC mRNA is 3926 bases and encodes 1178 amino acid PC precursor protein. A 5' rapid amplification of cDNA ends protocol was used to clone the 5' end of the mRNA. Six 5'U...

    journal_title:Animal biotechnology

    pub_type: 杂志文章

    doi:10.1081/ABIO-120037897

    authors: Agca C,Bidwell CA,Donkin SS

    更新日期:2004-05-01 00:00:00