Full-length nucleotide sequence of a simian TT virus isolate obtained from a chimpanzee: evidence for a new TT virus-like species.

Abstract:

:Recently, we identified TT virus (TTV) isolates from nonhuman primates and named them simian TTV (s-TTV). To characterize the genomic structure of these isolates in more detail, the full-length nucleotide sequence of the s-TTV isolate (designated s-TTV CH65-1), recovered from a chimpanzee born in West Africa, was amplified by nested PCR with inverted primers deduced from the untranslated region of s-TTV DNA. CH65-1 was composed of 3899 nucleotides (nt) and had two open reading frames (ORF) spanning 2295 nt (ORF1) and 402 nt (ORF2). The sequence had only 52.3% similarity to the prototype TA278 human isolate. Phylogenetic analysis demonstrated that CH65-1 was distinct from the human TTV isolates. These results suggested that s-TTV may represent a new TTV-like viral species or genus.

journal_name

Virology

journal_title

Virology

authors

Inami T,Obara T,Moriyama M,Arakawa Y,Abe K

doi

10.1006/viro.2000.0621

subject

Has Abstract

pub_date

2000-11-25 00:00:00

pages

330-5

issue

2

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(00)90621-4

journal_volume

277

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • A major internal initiation site for the in vitro translation of the adenovirus DNA polymerase.

    abstract::An open reading frame which encodes at least 90% of the adenovirus type 2 DNA polymerase gene was cloned behind the SP6 promoter and transcribed in vitro using the SP6 RNA polymerase. The resultant RNA was translated in a rabbit reticulocyte cell free system. In addition to the translation of a 120-kDa protein corresp...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90181-9

    authors: Hassin D,Korn R,Horwitz MS

    更新日期:1986-11-01 00:00:00

  • Protective immunity provided by HLA-A2 epitopes for fusion and hemagglutinin proteins of measles virus.

    abstract::Natural infection and vaccination with a live-attenuated measles virus (MV) induce CD8(+) T-cell-mediated immune responses that may play a central role in controlling MV infection. In this study, we show that newly identified human HLA-A2 epitopes from MV hemagglutinin (H) and fusion (F) proteins induced protective im...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.04.040

    authors: Oh S,Stegman B,Pendleton CD,Ota MO,Pan CH,Griffin DE,Burke DS,Berzofsky JA

    更新日期:2006-09-01 00:00:00

  • Identification of proteins encoded by avian reoviruses and evidence for post-translational modification.

    abstract::Twelve avian reovirus strain 176 proteins, 10 structural (lambda 1, lambda 2, lambda 3, mu 1, mu 2/mu 2C, sigma 1, sigma 2, sigma 3, and sigma 4), and 2 nonstructural (mu NS and sigma NS) were identified and characterized by electrophoretic analysis of purified virions and infected cell lysates. Three of the identifie...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1147

    authors: Ni Y,Ramig RF,Kemp MC

    更新日期:1993-03-01 00:00:00

  • Membrane topology of coronavirus E protein.

    abstract::Coronavirus small envelope protein E has two known biological functions: it plays a pivotal role in virus envelope formation, and the murine coronavirus E protein induces apoptosis in E protein-expressing cultured cells. The E protein is an integral membrane protein. Its C-terminal region extends cytoplasmically in th...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.0818

    authors: Maeda J,Repass JF,Maeda A,Makino S

    更新日期:2001-03-15 00:00:00

  • cDNAs of beet necrotic yellow vein virus RNAs 3 and 4 are rendered biologically active in a plasmid containing the cauliflower mosaic virus 35S promoter.

    abstract::cDNAs of beet necrotic yellow vein virus RNAs 3 and 4 could be rendered biologically active when they were placed under the control of the cauliflower mosaic virus 35S promoter and polyadenylation signal. Although the 35S in vivo transcripts should have contained up to forty 5' and several hundred 3' nonviral nucleoti...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90806-m

    authors: Commandeur U,Jarausch W,Li Y,Koenig R,Burgermeister W

    更新日期:1991-11-01 00:00:00

  • His1 and His2 are distantly related, spindle-shaped haloviruses belonging to the novel virus group, Salterprovirus.

    abstract::Spindle-shaped viruses are a dominant morphotype in hypersaline waters but their molecular characteristics and their relationship to other archaeal viruses have not been determined. Here, we describe the isolation, characteristics and genome sequence of His2, a spindle-shaped halovirus, and compare it to the previousl...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.02.005

    authors: Bath C,Cukalac T,Porter K,Dyall-Smith ML

    更新日期:2006-06-20 00:00:00

  • Preferential replication of FIV in activated CD4(+)CD25(+)T cells independent of cellular proliferation.

    abstract::Studies attempting to identify reservoirs of HIV-1 latency have documented that the virus persists as both a latent and productive infection in subsets of CD4(+) cells. Reports regarding establishment of a stable HIV-1 infection in quiescent T cells in vitro, however, are controversial. In the present study, we invest...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.01.014

    authors: Joshi A,Vahlenkamp TW,Garg H,Tompkins WA,Tompkins MB

    更新日期:2004-04-10 00:00:00

  • Origins of dengue type 2 viruses associated with increased pathogenicity in the Americas.

    abstract::The recent emergence and spread of dengue hemorrhagic fever in the Americas have been a major source of concern. Efforts to control this disease are dependent on understanding the pathogenicity of dengue viruses and their transmission dynamics. Pathogenicity studies have been hampered by the lack of in vitro or in viv...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8504

    authors: Rico-Hesse R,Harrison LM,Salas RA,Tovar D,Nisalak A,Ramos C,Boshell J,de Mesa MT,Nogueira RM,da Rosa AT

    更新日期:1997-04-14 00:00:00

  • Reduced levels of alpha1(XI) procollagen mRNA in SV40-transformed cells.

    abstract::We have used mRNA differential display to search for cellular genes whose expression is modulated in SV40-transformed cells. We identified a gene, the alpha1 subunit of type XI procollagen (alpha1(XI)), whose mRNA level is reduced in most F111 rat cell lines that express either wild-type SV40 T antigen or an amino-ter...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0212

    authors: Sompayrac L,Jane S,Danna KJ

    更新日期:1996-04-15 00:00:00

  • UL5, a protein required for HSV DNA synthesis: genetic analysis, overexpression in Escherichia coli, and generation of polyclonal antibodies.

    abstract::The mutations in two DNA-negative ts mutants of herpes simplex virus type 1 (HSV-1), tsK13 and tsM19, have been previously mapped to a 2.0-kb fragment (coordinates 0.095-0.108) at the left end of the genome (S. Weller, D. Aschman, W. Sacks, D. Coen, and P. Schaffer, 1983, Virology 130, 290-305). Sequence analysis of t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90507-7

    authors: Zhu L,Weller SK

    更新日期:1988-10-01 00:00:00

  • Antibodies against Sendai virus L protein: distribution of the protein in nucleocapsids revealed by immunoelectron microscopy.

    abstract::Antibodies against the L protein of Sendai virus were made by immunizing rabbits with a synthetic peptide representing a carboxyl-terminal region of the protein predicted from the base sequence of its gene. These antibodies were used to localize the L protein in viral nucleocapsids by electron microscopy. Immunogold l...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90257-7

    authors: Portner A,Murti KG,Morgan EM,Kingsbury DW

    更新日期:1988-03-01 00:00:00

  • Raccoon poxvirus feline panleukopenia virus VP2 recombinant protects cats against FPV challenge.

    abstract::An infectious raccoon poxvirus (RCNV) was used to express the feline panleukopenia virus (FPV) open reading frame VP2. The recombinant, RCNV/FPV, was constructed by homologous recombination with a chimeric plasmid for inserting the expression cassette into the thymidine kinase (TK) locus of RCNV. Expression of the VP2...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0186

    authors: Hu L,Esposito JJ,Scott FW

    更新日期:1996-04-01 00:00:00

  • Immunolocalization of the dengue virus nonstructural glycoprotein NS1 suggests a role in viral RNA replication.

    abstract::Although many workers have investigated the maturation and processing of the flavivirus nonstructural glycoprotein NS1 in infected cells, these studies have provided little insight into a possible function for NS1. In this study we investigated the subcellular localization of NS1 both by immunofluorescence and cryo-im...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0307

    authors: Mackenzie JM,Jones MK,Young PR

    更新日期:1996-06-01 00:00:00

  • Antigenic mapping of the recombinant Norwalk virus capsid protein using monoclonal antibodies.

    abstract::Norwalk virus (NV) is the prototype strain of a group of noncultivatable caliciviruses that infect humans and cause outbreaks of epidemic acute nonbacterial gastroenteritis. The NV virion is composed of 180 copies of a single structural protein that, when expressed in insect cells infected with a recombinant baculovir...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0112

    authors: Hardy ME,Tanaka TN,Kitamoto N,White LJ,Ball JM,Jiang X,Estes MK

    更新日期:1996-03-01 00:00:00

  • The E5 gene of HPV-16 enhances keratinocyte immortalization by full-length DNA.

    abstract::Human papillomavirus type 16 (HPV-16) is the most common papillomavirus genome found in human cervical cancers and its DNA is capable of immortalizing primary keratinocytes in vitro. When expressed by their native promoter, two separate HPV-16 oncogenes, E6 and E7, cooperate to immortalize primary human keratinocytes....

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0475

    authors: Stöppler MC,Straight SW,Tsao G,Schlegel R,McCance DJ

    更新日期:1996-09-01 00:00:00

  • Genetic diversity and purifying selection in West Nile virus populations are maintained during host switching.

    abstract::To investigate differential evolutionary rates and selective forces of WNV in hosts and vectors, we measured the genetic diversity that arose during alternating passage in mosquitoes and birds. Within-host genetic diversity was monitored in each of three experimentally passed replicates, and the complete genome sequen...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.02.032

    authors: Jerzak GV,Brown I,Shi PY,Kramer LD,Ebel GD

    更新日期:2008-05-10 00:00:00

  • Effect of receptor binding domain mutations on receptor binding and transmissibility of avian influenza H5N1 viruses.

    abstract::Although H5N1 influenza viruses have been responsible for hundreds of human infections, these avian influenza viruses have not fully adapted to the human host. The lack of sustained transmission in humans may be due, in part, to their avian-like receptor preference. Here, we have introduced receptor binding domain mut...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2011.02.015

    authors: Maines TR,Chen LM,Van Hoeven N,Tumpey TM,Blixt O,Belser JA,Gustin KM,Pearce MB,Pappas C,Stevens J,Cox NJ,Paulson JC,Raman R,Sasisekharan R,Katz JM,Donis RO

    更新日期:2011-04-25 00:00:00

  • Sequence comparison of JSRV with endogenous proviruses: envelope genotypes and a novel ORF with similarity to a G-protein-coupled receptor.

    abstract::Ovine pulmonary carcinoma, a contagious lung cancer of sheep, is caused by the oncogenic jaagsiekte sheep retrovirus (JSRV) that is closely related to a family of endogenous sheep retroviral sequences (ESRVs). By using exogenous virus-specific U3 oligonucleotide primers, the entire JSRV proviral genome or its 3' part ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.9728

    authors: Bai J,Bishop JV,Carlson JO,DeMartini JC

    更新日期:1999-06-05 00:00:00

  • Modification of foot-and-mouth disease virus after serial passages in the presence of antiviral polyclonal sera.

    abstract::Foot-and-mouth disease virus (FMDV) shows a remarkable antigenic variability. Like other RNA viruses, this virus has a high rate of mutation. It has been proposed that selection exerted by the host's antibodies could play a major role in the rapid evolution of FMDV. The present work reports the selection of FMDV antib...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90629-6

    authors: Carrillo EC,Rojas ER,Cavallaro L,Schiappacassi M,Campos R

    更新日期:1989-08-01 00:00:00

  • Characterization of the leader papain-like proteinase of MHV-A59: identification of a new in vitro cleavage site.

    abstract::Sequence analysis of the mouse hepatitis virus, strain A59 (MHV-A59) genome predicts the presence of two papain-like proteinases encoded within the first open reading frame (ORF 1a) of the replicase gene. The more 5' of these domains, the leader papain-like proteinase, is responsible for the cleavage of the amino term...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1281

    authors: Bonilla PJ,Hughes SA,Piñón JD,Weiss SR

    更新日期:1995-06-01 00:00:00

  • Ex vivo detection of adenovirus specific CD4+ T-cell responses to HLA-DR-epitopes of the Hexon protein show a contracted specificity of T(HELPER) cells following stem cell transplantation.

    abstract::Human adenovirus (HAdV) is a cause of significant morbidity and mortality in immunocompromised patients, especially after stem cell transplantation (SCT). Viral clearance has been attributed to CD4(+) T-cell responses against the Hexon-protein, but the frequency of specific T(HELPER) cells is extremely low or not dete...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.10.049

    authors: Serangeli C,Bicanic O,Scheible MH,Wernet D,Lang P,Rammensee HG,Stevanovic S,Handgretinger R,Feuchtinger T

    更新日期:2010-02-20 00:00:00

  • Localization of multiple TMV encapsidation initiation sites on rbcL gene transcripts.

    abstract::TMV capsid protein reacts with and encapsidates many of the chloroplast DNA transcripts both in vivo and in vitro to form pseudovirions. We report on the encapsidation initiation reaction with one of the major RNA species found in in vivo formed pseudovirions, the mRNA for the chloroplast-encoded large subunit of ribu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90280-8

    authors: Atreya CD,Siegel A

    更新日期:1989-02-01 00:00:00

  • Construction and characterization of infectious hepatitis C virus chimera containing structural proteins directly from genotype 1b clinical isolates.

    abstract::HCV genotype is a major determinant of clinical outcome, and GT1b HCV infection is the most difficult to treat and also the predominant genotype in East Asia and Europe. We developed 1b/JFH-1 inter-genotypic recombinants containing the structural genes (Core, E1, E2), p7 and the 1stTMD of NS2 directly from GT1b clinic...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.04.030

    authors: Lu J,Tao W,Li R,Xiang Y,Zhang N,Xiang X,Xie Q,Zhong J

    更新日期:2013-08-15 00:00:00

  • Adaptive changes in HIV-1 subtype C proteins during early infection are driven by changes in HLA-associated immune pressure.

    abstract::It is unresolved whether recently transmitted human immunodeficiency viruses (HIV) have genetic features that specifically favour their transmissibility. To identify potential "transmission signatures", we compared 20 full-length HIV-1 subtype C genomes from primary infections, with 66 sampled from ethnically and geog...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.10.002

    authors: Treurnicht FK,Seoighe C,Martin DP,Wood N,Abrahams MR,Rosa Dde A,Bredell H,Woodman Z,Hide W,Mlisana K,Karim SA,Gray CM,Williamson C

    更新日期:2010-01-20 00:00:00

  • Tumorigenicity of adenovirus-transformed cells: region E1A of adenovirus 12 confers resistance to natural killer cells.

    abstract::Sensitivity of a library of rat cells transformed in vitro with viable recombinant adenoviruses to natural killer (NK) cells and allogeneic cytotoxic T cells has been studied and correlated with their oncogenic potential in syngeneic rats. All cell lines transformed with the sub370-12E1AB virus (containing E1A and E1B...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90143-6

    authors: Sawada Y,Föhring B,Shenk TE,Raska K Jr

    更新日期:1985-12-01 00:00:00

  • Nucleotide sequence of the leader and nucleocapsid protein gene of mumps virus and epitope mapping with the in vitro expressed nucleocapsid protein.

    abstract::The nucleotide sequence of the leader and the gene encoding the nucleocapsid protein (NP) of mumps virus Miyahara strain have been determined. The leader sequence is 55 nucleotides in length and the NP gene is 1845 nucleotides in length, exclusive of poly(A). The NP gene codes for a protein of 549 amino acids, with a ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90466-5

    authors: Tanabayashi K,Takeuchi K,Hishiyama M,Yamada A,Tsurudome M,Ito Y,Sugiura A

    更新日期:1990-07-01 00:00:00

  • Nucleotide sequence analysis of the S genomic segment of Prospect Hill virus: comparison with the prototype Hantavirus.

    abstract::The genomic S RNA segment of Prospect Hill virus (PHV), a member of the Hantavirus genus, was molecularly cloned and the nucleotide sequence of the cDNA determined. The PHV S RNA segment is 1675 nucleotides long. A long open reading frame was identified in the viral complementary-sense RNA that could encode a 433 amin...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90197-y

    authors: Parrington MA,Kang CY

    更新日期:1990-03-01 00:00:00

  • Complete genome analysis and molecular characterization of Usutu virus that emerged in Austria in 2001: comparison with the South African strain SAAR-1776 and other flaviviruses.

    abstract::Here we describe the complete genome sequences of two strains of Usutu virus (USUV), a mosquito-borne member of the genus Flavivirus in the Japanese encephalitis virus (JEV) serogroup. USUV was detected in Austria in 2001 causing a high mortality rate in blackbirds; the reference strain (SAAR-1776) was isolated in 195...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.08.005

    authors: Bakonyi T,Gould EA,Kolodziejek J,Weissenböck H,Nowotny N

    更新日期:2004-10-25 00:00:00

  • Gammaherpesvirus targets peritoneal B-1 B cells for long-term latency.

    abstract::Gammaherpesviruses establish life-long infection in most adults and are associated with the development of B cell lymphomas. While the interaction between gammaherpesviruses and splenic B cells has been explored, very little is known about gammaherpesvirus infection of B-1 B cells, innate-like B cells that primarily r...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2016.02.022

    authors: Rekow MM,Darrah EJ,Mboko WP,Lange PT,Tarakanova VL

    更新日期:2016-05-01 00:00:00

  • Virion formation is required for the long-distance movement of red clover necrotic mosaic virus in movement protein transgenic plants.

    abstract::The red clover necrotic mosaic dianthovirus (RCNMV) genome is split between two single-stranded RNA species. The polycistronic RNA-1 encodes the viral RNA polymerase and capsid protein (CP) and the monocistronic RNA-2 encodes the 35 kDa cell-to-cell movement protein (MP). Nicotiana benthamiana plants transformed with ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1518

    authors: Vaewhongs AA,Lommel SA

    更新日期:1995-10-01 00:00:00