Accurate estimation of inter-atomic distances in large proteins by NMR.

Abstract:

:Recently a method was proposed which permits the extraction of the exact interatomic distance information from the measurement of the evolution of a single cross-peak relative to the mixing time in a NOESY experiment. This is performed through a careful multi-exponential analysis allowing the extraction of the relaxation parameter, and, consequently, the inter-proton distance. We investigate in the present paper whether this technique, already evaluated theoretically, can be used in a real experimental case. We have recorded and analyzed a set of 56 NOESY experiments on a lysozyme sample. Some 81 nOe build-up curves obtained from these data were analyzed in terms of distance. It is shown that the correlation between the measured distances and the reference distances obtained from crystallographic studies, is quite good. An accuracy of the order of 10% is obtained.

journal_name

Biochimie

journal_title

Biochimie

authors

Reisdorf C,Malliavin TE,Delsuc MA

doi

10.1016/0300-9084(92)90063-k

keywords:

subject

Has Abstract

pub_date

1992-09-01 00:00:00

pages

809-13

issue

9-10

eissn

0300-9084

issn

1638-6183

pii

0300-9084(92)90063-K

journal_volume

74

pub_type

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