Evaluation of susceptibility of HIV-1 CRF01_AE variants to neutralization by a panel of broadly neutralizing antibodies.

Abstract:

:Broadly neutralizing antibodies (bNAbs) are very promising agents for HIV-1 prophylaxis and AIDS treatment. However, the neutralization susceptibility of circulating recombinants such as CRF01_AE, which is becoming increasingly prevalent, has not been studied in detail until now. Here, we focused on CRF01_AE in China and aimed to find bNAbs that can be used for neutralization of CRF01_AE. Full-length env clones were obtained from the plasma samples of 22 HIV-1-infected individuals sampled in 2009 and 2015. An env-pseudovirus-based neutralization assay was conducted using five categories of bNAbs: VRC01, NIH45-46G54W, and 3BNC117 (targeting the CD4 binding site); PG9 and PG16 (targeting the V1V2 loop); 2G12 (glycan specific), PGT121 and 10-1074 (targeting the V3 glycan); 2F5, 4E10, and 10E8 (targeting the membrane-proximal external region (MPER)). The neutralizing efficiency was compared, and features of the escape pseudoviruses were analyzed. The CRF01_AE pseudoviruses exhibited different susceptibility to these bNAbs. Overall, 4E10, 10E8, and 3BNC117 neutralized all 22 env-pseudotyped viruses, followed by NIH45-46G54W and VRC01, which neutralized more than 90% of the viruses. 2F5, PG9, and PG16 showed only moderate breadth, while the other three bNAbs neutralized none of these pseudoviruses. Specifically, 10E8, NIH45-46G54Wand 3BNC117 showed the highest efficiency, combining neutralization potency and breadth. Mutations at position 160, 169, 171 were associated with resistance to PG9 and PG16, while loss of a potential glycan at position 332 conferred insensitivity to V3-glycan-targeting bNAbs. Our results may help for choosing bNAbs that can be used preferentially for prophylactic or therapeutic approaches in China.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Wang H,Yuan T,Li T,Li Y,Qian F,Zhu C,Liang S,Hoffmann D,Dittmer U,Sun B,Yang R

doi

10.1007/s00705-018-4011-7

subject

Has Abstract

pub_date

2018-12-01 00:00:00

pages

3303-3315

issue

12

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-018-4011-7

journal_volume

163

pub_type

杂志文章
  • Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species.

    abstract::Chrysanthemum virus B encodes a multifunctional p12 protein that acts as a transcriptional activator in the nucleus and as a suppressor of RNA silencing in the cytoplasm. Here, we investigated the impact of p12 on accumulation of major classes of small RNAs (sRNAs). The results show dramatic changes in the sRNA profil...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-020-04832-y

    authors: Vetukuri RR,Kalyandurg PB,Saripella GV,Sen D,Gil JF,Lukhovitskaya NI,Grenville-Briggs LJ,Savenkov EI

    更新日期:2020-12-01 00:00:00

  • Population structure and diversity of citrus tristeza virus (CTV) isolates in Hunan province, China.

    abstract::Stem-pitting (SP) is the main type of citrus tristeza virus (CTV) that causes severe damage to citrus trees, especially those of sweet orange, in Hunan province, China. Understanding the local CTV population structure should provide clues for effective mild strain cross-protection (MSCP) of the SP strain of CTV. In th...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3089-z

    authors: Xiao C,Yao RX,Li F,Dai SM,Licciardello G,Catara A,Gentile A,Deng ZN

    更新日期:2017-02-01 00:00:00

  • Antigenic diversity of Norwalk-like viruses: expression of the capsid protein of a genogroup I virus, distantly related to Norwalk virus.

    abstract::The gene encoding the capsid protein of a genogroup I Norwalk-like virus (NLV) (Hu/NLV/Stav/95/Nor) was cloned and expressed in insect cells using a baculovirus vector. The His-tagged recombinant capsid protein (rStav) was antigenic and immunogenic, showed an apparent molecular weight of approximately 68 kD in protein...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050665

    authors: Myrmel M,Rimstad E

    更新日期:2000-01-01 00:00:00

  • The role of the C-terminal region of olive latent virus 1 coat protein in host systemic infection.

    abstract::A full-length cDNA clone of olive latent virus 1 (OLV-1), a member of the genus Necrovirus, family Tombusviridae, was subjected to site-directed mutagenesis, and coat protein gene mutants were constructed. A mutant clone, denoted Delta3297, was obtained by deleting the nucleotide in position 3297, thus inducing a fram...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-006-0767-2

    authors: Pantaleo V,Grieco F,Di Franco A,Martelli GP

    更新日期:2006-10-01 00:00:00

  • Course and transmission characteristics of oral low-dose infection of domestic pigs and European wild boar with a Caucasian African swine fever virus isolate.

    abstract::In 2007, African swine fever virus (ASFV) was introduced into the Transcaucasian countries and Russia. Since then, it has spread alarmingly and reached the European Union. ASFV strains are highly virulent and lead to almost 100% mortality under experimental conditions. However, the possibility of dose-dependent diseas...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-015-2430-2

    authors: Pietschmann J,Guinat C,Beer M,Pronin V,Tauscher K,Petrov A,Keil G,Blome S

    更新日期:2015-07-01 00:00:00

  • Inhibition of attachment of virions of Norwalk virus to mammalian cells by soluble histone molecules.

    abstract::Viral infection is usually initiated by the binding of virus particles to specific receptor molecule(s) on the host cell surface. Blocking of this step prevents the following step, penetration into the cell. In the present study, we investigated the virus-cell interactions of virions of Norwalk virus (NV), a major eti...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-003-0143-4

    authors: Tamura M,Natori K,Kobayashi M,Miyamura T,Takeda N

    更新日期:2003-09-01 00:00:00

  • Preparation and characterization of monoclonal antibodies to enteric adenovirus types 40 and 41.

    abstract::We have prepared monoclonal antibodies to each of the enteric adenoviruses types 40 and 41. Three different hybridoma cell lines were selected which produced antibody found to react by radioimmunoprecipitation with adenovirus (Ad) hexon antigens. One was specific for Ad 40, another for Ad 41, and a third one reacted w...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310718

    authors: Herrmann JE,Perron-Henry DM,Stobbs-Walro D,Blacklow NR

    更新日期:1987-01-01 00:00:00

  • A comparison of the MeltPro® HPV Test with the Cobas® HPV Test for detecting and genotyping 14 high-risk human papillomavirus types.

    abstract::The clinical performance of the newly developed MeltPro® HPV Test, based on multicolor melting curve analysis, was evaluated and compared with the commercially available Cobas® HPV Test for detection of HPV and genotyping of HPV-16 and HPV-18. A total of 1647 cervical samples were analyzed with both tests. The agreeme...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3645-1

    authors: Tang Z,Xu Y,Song N,Zou D,Liao Y,Li Q,Pan C

    更新日期:2018-03-01 00:00:00

  • Characterization of rotavirus subgroup-specific monoclonal antibodies and use in single-sandwich ELISA systems for rapid subgrouping of human strains.

    abstract::Two subgroup-specific monoclonal antibodies (MAb) raised in mice against group A human rotavirus were shown to react by immunoblotting with the trimeric form of VP6 of the homologous subgroup and successfully applied to development of new single-sandwich ELISA systems for rapid subgrouping of human strains. All of the...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01317927

    authors: Gerna G,Sarasini A,Torsellini M,di Matteo A,Baldanti F,Parea M,Battaglia M

    更新日期:1989-01-01 00:00:00

  • Characterization of two human lymphoid cell lines producing human T-lymphotropic virus type I (HTLV-I) isolated from patients with HTLV-I-associated myelopathy or encephalopathy.

    abstract::Two cell lines, CNS-5 and CNS-6, were established by cocultivation of sedimented cells in cerebrospinal fluid (CSF) from two anti-human T-lymphotropic virus type I (HTLV-I) antibody-positive male patients with encephalopathy and HTLV-I-associated myelopathy, respectively, with peripheral blood mononuclear cells from a...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01311306

    authors: Iwata J,Oka T,Furihata M,Sonobe H,Matsubayashi K,Uemura Y,Miyoshi I,Ohtsuki Y

    更新日期:1991-01-01 00:00:00

  • Electron microscopic study of human immunodeficiency virus type 1 (HIV-1) core structure: two RNA strands in the core of mature and budding particles.

    abstract::The basic structure of human immunodeficiency virus type 1 (HIV-1) has been investigated morphologically; however, the internal structure of HIV-1 core is not well understood. We studied the internal structures by transmission electron microscopy. We modified the method for electron staining of ultrathin sections and ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050083

    authors: Takasaki T,Kurane I,Aihara H,Ohkawa N,Yamaguchi J

    更新日期:1997-01-01 00:00:00

  • Differences in the effectiveness of delivery of B- and CTL-epitopes incorporated into the hepatitis B core antigen (HBcAg) c/e1-region.

    abstract::Work from a number of laboratories including our own has shown that foreign B-epitopes inserted into the c/e1-region of Hepatitis B core antigen (HBcAg) elicit powerful antibody responses when mice are immunised with the recombinant core particles. In the present study, we wished to take advantage of the immunodominan...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050590

    authors: Street M,Herd K,Londono P,Doan T,Dougan G,Kast WM,Tindle RW

    更新日期:1999-01-01 00:00:00

  • An attenuation mechanism of Newcastle disease vaccine strain TCND.

    abstract::To provide information on the mechanism of attenuation of a Newcastle disease vaccine strain, TCND, we compared it with the parental virulent strain California 11,914 (CAL) biologically and genetically. It was found that TCND bore the fusion protein of virulent type, consisting of a pair of dibasic amino acid residues...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050361

    authors: Takakuwa H,Ito T,Takada A,Okazaki K,Kida H

    更新日期:1998-01-01 00:00:00

  • Molecular diagnosis of occult hepatitis C virus infection in Iranian injection drug users.

    abstract::Occult HCV infection (OCI) has been described as the presence of hepatitis C virus (HCV) genomic RNA in hepatocytes and/or peripheral blood mononuclear cell (PBMC) specimens and the lack of HCV genomic RNA and anti-HCV antibodies (Abs) in plasma samples. Injection drug users (IDUs) are the most important high-risk gro...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-018-4066-5

    authors: Sheikh M,Bokharaei-Salim F,Monavari SH,Ataei-Pirkooh A,Esghaei M,Moradi N,Babaei R,Fakhim A,Keyvani H

    更新日期:2019-02-01 00:00:00

  • Temperature-sensitive mutants of mouse hepatitis virus type 3 (MHV-3): isolation, biochemical and genetic characterization.

    abstract::Mouse hepatitis virus 3 (MHV-3) is highly hepatotropic in sensitive mice. Temperature-sensitive mutants (ts mutants) induced by N-methyl-N'-nitrosoguanidine and 5-fluorouracil were isolated. Twelve mutants which were able to induce the formation of syncytia at 33 degrees C but not at the restrictive temperature (39.5 ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01487679

    authors: Martin JP,Koehren F,Rannou JJ,Kirn A

    更新日期:1988-01-01 00:00:00

  • Regulation of the Borna disease virus polymerase complex by the viral nucleoprotein p38 isoform. Brief Report.

    abstract::Borna disease virus (BDV) polymerase can be reconstituted by co-expression of the viral genes N, P and L. N codes for two proteins, p39 and p38, resulting from alternative translation initiation. Using a viral minireplicon system we observed that unlike p39, p38 was almost completely inactive when expressed with P and...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-004-0327-6

    authors: Schneider U,Naegele M,Staeheli P

    更新日期:2004-07-01 00:00:00

  • Transcriptional analysis of the bovine herpesvirus 1 Cooper isolate. Temporal analysis and characterization of immediate-early, early, and late RNA.

    abstract::Blot hybridization analysis of infected bovine herpesvirus 1 (BHV-1) cellular RNA isolated at various times post infection and after treatment with specific metabolic inhibitors was used to characterize transcription of the BHV-1 Cooper isolate. Synthesis of BHV-1 RNA was detected as early as 3 h post infection and re...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01316744

    authors: Seal BS,Irving JM,Whetstone CA

    更新日期:1991-01-01 00:00:00

  • A cilevirus infects ornamental hibiscus in Hawaii.

    abstract::The complete nucleotide sequence of a virus infecting ornamental hibiscus (Hibiscus sp.) in Hawaii with symptoms of green ringspots on senescing leaves was determined from double-stranded RNA isolated from symptomatic tissue. Excluding polyadenylated regions at the 3' termini, the bipartite RNA genome was 8748 and 501...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1745-0

    authors: Melzer MJ,Simbajon N,Carillo J,Borth WB,Freitas-Astúa J,Kitajima EW,Neupane KR,Hu JS

    更新日期:2013-11-01 00:00:00

  • The complete nucleotide sequence of the barley yellow dwarf GPV isolate from China shows that it is a new member of the genus Polerovirus.

    abstract::The complete nucleotide sequence of the ssRNA genome of a Chinese GPV isolate of barley yellow dwarf virus (BYDV) was determined. It comprised 5673 nucleotides, and the deduced genome organization resembled that of members of the genus Polerovirus. It was most closely related to cereal yellow dwarf virus-RPV (77% nt i...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-009-0415-8

    authors: Zhang W,Cheng Z,Xu L,Wu M,Waterhouse P,Zhou G,Li S

    更新日期:2009-01-01 00:00:00

  • Persistence of rat parvovirus in athymic rats.

    abstract::Euthymic (SD or outbred rnu/+) and athymic (rnu/rnu) rats were inoculated oronasally or intraperitoneally with the RV-Y strain of rat virus when they were 2 days or 4 weeks old. Clinical signs of infection in athymic infants were similar to those in euthymic infants, but significantly more athymic infants died. Some i...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01311362

    authors: Gaertner DJ,Jacoby RO,Smith AL,Ardito RB,Paturzo FX

    更新日期:1989-01-01 00:00:00

  • Nucleotide sequencing of a part of the 5'-noncoding region of echovirus type 9 and rapid virus detection during the acute phase of aseptic meningitis.

    abstract::A part of the 5'-noncoding region of echovirus type 9 isolates was sequenced, and an attempt was made for rapid virus detection in clinical samples obtained from 22 subjects hospitalized with aseptic meningitis. The sequence identity of 440-bp products amplified from the region by RT-PCR was 87.7% between the standard...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050124

    authors: Kim GR,Lee JS,Jung YT,Chung YJ,Rhyu MG

    更新日期:1997-01-01 00:00:00

  • Identification and characterization of novel hepatitis B virus subgenotype C10 in Nusa Tenggara, Indonesia.

    abstract::Six novel subgenotypes (B7, B8, C6, C8, C9, and D6) within three hepatitis B virus (HBV) genotypes (B-D) were recently identified in Indonesia. To further characterize HBV in this country, 18 HBV-viremic samples obtained from blood donors in Nusa Tenggara, Indonesia, were subjected to phylogenetic analysis of an 1.6-k...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-010-0628-x

    authors: Mulyanto,Depamede SN,Surayah K,Tjahyono AA,Jirintai,Nagashima S,Takahashi M,Okamoto H

    更新日期:2010-05-01 00:00:00

  • Novel single-stranded, circular DNA virus identified in cats in Japan.

    abstract::We detected a novel feline stool-associated circular DNA virus (FeSCV) in fecal samples from cats with diarrhea using consensus primers matching those of circovirus and cyclovirus. FeSCV is a circular DNA virus containing a genome with a total length of 2,046 nt encoding 2 open reading frames. Phylogenetic analyses in...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-018-4020-6

    authors: Takano T,Yanai Y,Hiramatsu K,Doki T,Hohdatsu T

    更新日期:2018-12-01 00:00:00

  • Association of a distinct strain of hollyhock yellow vein mosaic virus and Ludwigia leaf distortion betasatellite with yellow vein mosaic disease of hollyhock (Alcea rosea) in India.

    abstract::A distinct strain of hollyhock yellow vein mosaic virus (HoYVMV) and Ludwigia leaf distortion betasatellite (LuLDB) were associated with yellow vein mosaic of hollyhock. The viral DNA genome (JQ911766) and betasatellite (JQ408216) shared highest nucleotide sequence identity (89.2 %) with HoYVMV (the only available seq...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2108-1

    authors: Srivastava A,Kumar S,Raj SK,Pande SS

    更新日期:2014-10-01 00:00:00

  • Characterization of the transforming domain of a feline sarcoma virus encoding a fgr-related tyrosine kinase.

    abstract::We investigated the transforming domain of a recently isolated feline sarcoma virus (TP1-FeSV) which encodes a fgr-related tyrosine kinase expressed as a gag-fgr fusion protein. The gag portion was removed and replication-competent expression vectors (RCAS) with inserted v-fgr sequences were established. Chicken embry...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01379113

    authors: Weyrauch G,Barnekow A

    更新日期:1994-01-01 00:00:00

  • Molecular characterization of canine parvovirus in Vientiane, Laos.

    abstract::The global emergence of canine parvovirus type 2c (CPV-2c) has been well documented. In the present study, 139 rectal swab samples collected from diarrheic dogs living in Vientiane, Laos, in 2016 were tested for the presence of the canine parvovirus (CPV) VP2 gene by PCR. The results showed that 82.73% (115/139) of do...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3212-1

    authors: Vannamahaxay S,Vongkhamchanh S,Intanon M,Tangtrongsup S,Tiwananthagorn S,Pringproa K,Chuammitri P

    更新日期:2017-05-01 00:00:00

  • Morphological method for estimation of simian virus 40 infectious titer.

    abstract::The cytomorphologic method previously reported for titration of adenoviruses has been employed for estimating the infectious titer of simian virus 40 (SV 40). Infected cells forming intranuclear inclusions were determined. The method examined possesses a number of advantages over virus titration by plaque assay and cy...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01341731

    authors: Landau SM,Nosach LN,Pavlova GV

    更新日期:1982-01-01 00:00:00

  • Cassava vein mosaic virus (CsVMV), type species for a new genus of plant double stranded DNA viruses?

    abstract::The complete sequence of 8159 nucleotides of the double stranded DNA genome of cassava vein mosaic virus (CsVMV) was determined (# U59751) and revealed a significant difference in genome organization when compared with a previous report (# U20341). When transferred to cassava plants by microbombardment, the full lengt...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050344

    authors: de Kochko A,Verdaguer B,Taylor N,Carcamo R,Beachy RN,Fauquet C

    更新日期:1998-01-01 00:00:00

  • First molecular characterization of grapevine virus B (GVB) in Portuguese grapevine cultivars and improvement of the RT-PCR detection assay.

    abstract::This work describes the first molecular characterization of grapevine virus B (GVB) in Portuguese grapevine cultivars. During a routine screening of 44 accessions in the National Collection of Grapevine Varieties (CAN PRT051), 17 were found infected with GVB in DAS-ELISA assays with commercial antibodies. However, onl...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3024-3

    authors: Fonseca F,Duarte V,Teixeira Santos M,Brazão J,Eiras-Dias E

    更新日期:2016-12-01 00:00:00

  • Profiling of cellular microRNA responses during the early stages of KSHV infection.

    abstract::Kaposi's sarcoma-associated herpesvirus (KSHV) causes a variety of cancers, including Kaposi's sarcoma (KS), primary effusion lymphoma (PEL), and multicentric Castleman disease (MCD). Host cellular microRNAs (miRNAs) play important post-transcriptional regulatory roles in gene expression and can greatly influence viru...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3478-y

    authors: Hussein HAM,Akula SM

    更新日期:2017-11-01 00:00:00