Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.

Abstract:

:Recent studies have demonstrated that MyoD initiates a feed-forward regulation of skeletal muscle gene expression, predicting that MyoD binds directly to many genes expressed during differentiation. We have used chromatin immunoprecipitation and high-throughput sequencing to identify genome-wide binding of MyoD in several skeletal muscle cell types. As anticipated, MyoD preferentially binds to a VCASCTG sequence that resembles the in vitro-selected site for a MyoD:E-protein heterodimer, and MyoD binding increases during differentiation at many of the regulatory regions of genes expressed in skeletal muscle. Unanticipated findings were that MyoD was constitutively bound to thousands of additional sites in both myoblasts and myotubes, and that the genome-wide binding of MyoD was associated with regional histone acetylation. Therefore, in addition to regulating muscle gene expression, MyoD binds genome wide and has the ability to broadly alter the epigenome in myoblasts and myotubes.

journal_name

Dev Cell

journal_title

Developmental cell

authors

Cao Y,Yao Z,Sarkar D,Lawrence M,Sanchez GJ,Parker MH,MacQuarrie KL,Davison J,Morgan MT,Ruzzo WL,Gentleman RC,Tapscott SJ

doi

10.1016/j.devcel.2010.02.014

subject

Has Abstract

pub_date

2010-04-20 00:00:00

pages

662-74

issue

4

eissn

1534-5807

issn

1878-1551

pii

S1534-5807(10)00112-7

journal_volume

18

pub_type

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