Transcript mapping in a 46-kb sequenced region at the core of 12q13.3 amplification in human cancers.

Abstract:

:We used a combination of sequence analysis and exon trapping in an effort to determine the complete transcript map for a cosmid (6E5) derived from 12q13.3, a region of DNA sequence amplification in human cancers. This cosmid, previously known to contain three genes (CDK4, SAS, and OS9), was sequenced, and that information was used for computer-assisted analysis. In addition, 6E5 was subjected to both internal and 3'-terminal exon-trapping protocols, and the results of these studies were used to guide cDNA cloning experiments. These studies demonstrate that this cosmid is derived from a remarkably gene-dense region and add two new transcripts (KIAA0167 and 6E5.2) to the list of sequences that are expressed in tumors bearing amplification of this region.

journal_name

Genomics

journal_title

Genomics

authors

Elkahloun AG,Krizman DB,Wang Z,Hofmann TA,Roe B,Meltzer PS

doi

10.1006/geno.1997.4727

subject

Has Abstract

pub_date

1997-06-01 00:00:00

pages

295-301

issue

2

eissn

0888-7543

issn

1089-8646

pii

S0888-7543(97)94727-3

journal_volume

42

pub_type

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