The analysis of temporal gene expression to estimate the age of forensically important blow fly pupae: results from three blind studies.

Abstract:

:The estimation of the minimum postmortem interval can be implemented by age estimation of corpse-associated primary colonizers such as the blow flies (Diptera: Calliphoridae). In cases where pupae represent the oldest stages found on a body, their age must be added to the duration of prepupal development to estimate the minimum postmortem interval. Although methods to age blow fly larvae have been well established using morphology, length or weight and age estimation of pupae has proved challenging. In a previous work, we quantified the changes in mRNA levels of four differentially expressed genes during the metamorphosis of Calliphora vicina pupae, hence representing molecular markers for pupal age (i.e., time elapsed since pupariation). Here, we demonstrate how these data can be used to estimate pupal age with inverse prediction. We present three blind studies conducted under various conditions and show that age of C. vicina pupae can be well estimated based on gene expression data. As these data are quantitative and can be processed automatically, gene expression has the potential to outperform morphological analysis in age estimation of forensically relevant blow fly pupae.

journal_name

Int J Legal Med

authors

Boehme P,Spahn P,Amendt J,Zehner R

doi

10.1007/s00414-013-0922-8

subject

Has Abstract

pub_date

2014-05-01 00:00:00

pages

565-73

issue

3

eissn

0937-9827

issn

1437-1596

journal_volume

128

pub_type

杂志文章
  • A new "miniSTR-multiplex" displaying reduced amplicon lengths for the analysis of degraded DNA.

    abstract::A multiplex PCR was designed for the loci D2S1338, D16S539, D18S51, TH01 and FGA using redesigned primers in order to reduce the lengths of the amplification products compared to the designs used in commercially available multiplex PCR kits, also including amelogenin. The new PCR primers were used to amplify highly de...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-005-0013-6

    authors: Grubwieser P,Mühlmann R,Berger B,Niederstätter H,Pavlic M,Parson W

    更新日期:2006-03-01 00:00:00

  • Development of species identification tests targeting the 16S ribosomal RNA coding region in mitochondrial DNA.

    abstract::This report describes the development of a species testing system based on the diversity of nucleotide sequences in mitochondrial DNA (mtDNA) among species. Five species, human, cow, pig, dog, and cat, were considered. The partial nucleotide sequences in 16S ribosomal RNA coding region were chosen as the target for di...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-006-0127-5

    authors: Imaizumi K,Akutsu T,Miyasaka S,Yoshino M

    更新日期:2007-05-01 00:00:00

  • ABCB1 gene polymorphisms are associated with fatal intoxications involving venlafaxine but not citalopram.

    abstract::P-glycoprotein (P-gp), encoded by the ABCB1/MDR1 gene, is a drug transporter at the blood-brain barrier. Several polymorphisms in the ABCB1 gene are known to affect the activity and/or expression of P-gp, thereby influencing the treatment response and toxicity of P-gp substrates like citalopram and venlafaxine. In thi...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-013-0849-0

    authors: Karlsson L,Green H,Zackrisson AL,Bengtsson F,Jakobsen Falk I,Carlsson B,Ahlner J,Kugelberg FC

    更新日期:2013-05-01 00:00:00

  • Coronary artery aneurysms in a young adult: a case of sudden death. A late sequelae of Kawasaki disease?

    abstract::The case concerns the sudden death of a 21-year-old male during a soccer game. The autopsy revealed large, calcified saccular aneurysms at the origins of both the left anterior descending and the right coronary arteries. Histologically, the wall of the aneurysms was thin and composed of an internal fibro-calcified lay...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140050213

    authors: Fineschi V,Paglicci Reattelli L,Baroldi G

    更新日期:1999-01-01 00:00:00

  • miRNA analysis in vitreous humor to determine the time of death: a proof-of-concept pilot study.

    abstract::We hypothesized that miRNAs present in vitreous humor could be a sort of "biological black box," storing information about physiological and environmental circumstances at death. As a proof of concept, we analyzed the vitreous humor miRNA signature to explore its forensic potential applications, such as determining th...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-012-0811-6

    authors: Odriozola A,Riancho JA,de la Vega R,Agudo G,García-Blanco A,de Cos E,Fernández F,Sañudo C,Zarrabeitia MT

    更新日期:2013-05-01 00:00:00

  • Discriminant analysis of mandibular measurements for the estimation of sex in a modern Brazilian sample.

    abstract::The present study aimed to evaluate the accuracy of mandibular measurements for sex determination in a Brazilian population. The sample was composed of 100 mandibles, of which 53 were female and 47 were male, and the average age was 57.03 years. The mandible measurement protocol was composed of 15 measurements, of whi...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-017-1681-8

    authors: Lopez-Capp TT,Rynn C,Wilkinson C,de Paiva LAS,Michel-Crosato E,Biazevic MGH

    更新日期:2018-05-01 00:00:00

  • Catalonian population study of the tetranucleotide repeat loci D3S1358, D8S1179, D18S51 and D19S253.

    abstract::Allele frequencies for four short tandem repeat loci were determined in a population sample from Catalonia (NE Spain). After denaturing PAGE electrophoresis, 8 alleles were identified for D3S1358 (n=201), 10 alleles for D8S1179 (n=198), 13 alleles for D18S51 (n=197) and 11 alleles for D19S253 (n=201). No deviation fro...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140050205

    authors: Gené M,Piqué E,Borrego N,Carracedo A,Huguet E,Moreno P

    更新日期:1998-01-01 00:00:00

  • A 17-month time course study of human RNA and DNA degradation in body fluids under dry and humid environmental conditions.

    abstract::Blood, saliva, and semen are some of the forensically most relevant biological stains commonly found at crime scenes, which can often be of small size or challenging due to advanced decay. In this context, it is of great importance to possess reliable knowledge about the effects of degradation under different environm...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-016-1373-9

    authors: Sirker M,Schneider PM,Gomes I

    更新日期:2016-11-01 00:00:00

  • Variants of the melanocortin 1 receptor gene (MC1R) and P gene as indicators of the population origin of an individual.

    abstract::The population origin of an individual is often requested to be determined from specimens left at a crime scene for identifying a suspect and individual identity. The melanocortin 1 receptor gene (MC1R) and P gene are associated with human pigmentation. Although several studies have reported that these genes are highl...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-008-0289-4

    authors: Masui S,Nakatome M,Matoba R

    更新日期:2009-05-01 00:00:00

  • Genetic variability at nine STR loci in the Chueta (Majorcan Jews) and the Balearic populations investigated by a single multiplex reaction.

    abstract::A study of the genetic variability in the Chueta (Majorcan Jews) and the Balearic (Majorca and Minorca Islands) populations was carried out using a multiplex system containing the nine tetrameric STRs D3S1358, vWA, FGA, D8S1179, D21S11, D18S51, D5S818, D13S317 and D7S820. The Chueta population has remained isolated be...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004149900101

    authors: Tomàs C,Picornell A,Castro JA,Ramon MM,Gusmão L,Lareu MV,Carracedo A

    更新日期:2000-01-01 00:00:00

  • Medico-legal assessment of methamphetamine and amphetamine serum concentrations-what can we learn from survived intoxications?

    abstract::Medico-legal experts are increasingly enlisted to assess the methamphetamine and amphetamine serum concentrations after a criminal offense. However, since criminal users rarely provide useful information to medico-legal experts regarding the substances abused, when the substance(s) was/were used, dose of ingestion too...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-017-1607-5

    authors: Weber M,Lessig R,Richter C,Ritter AP,Weiß I

    更新日期:2017-09-01 00:00:00

  • The role of hereditary KCNQ1 mutations in water-related death.

    abstract::Drowning remains one of the major causes of death in most developed countries despite the fact that many of the victims are known to be at least moderate swimmers as well as healthy directly before the event. Here, fatal arrhythmias and especially the long QT syndrome (LQTS) have been proposed as the underlying mechan...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-015-1259-2

    authors: Tzimas I,Bajanowski T,Poetsch M

    更新日期:2016-03-01 00:00:00

  • Population genetics of 26 Y-STR loci for the Han ethnic in Hunan province, China.

    abstract::To study the population data of Y-chromosome STRs (Y-STRs) of Han population resided in Hunan province, we analyzed haplotypes of 26 Y-STRs (DYS19, DYS385a/b, DYS389I, DYS389II, DYS390, DYS391, DYS392, DYS393, DYS437, DYS438, DYS439, DYS448, DYS456, DYS458, DYS481, DYS533, DYS549, DYS570, DYS576, DYS635, DYS643, DYS38...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章,评审

    doi:10.1007/s00414-016-1411-7

    authors: Jiang W,Gong Z,Rong H,Guan H,Zhang T,Zhao Y,Fu X,Zha L,Jin C,Ding Y

    更新日期:2017-01-01 00:00:00

  • An acute gabapentin fatality: a case report with postmortem concentrations.

    abstract::Gabapentin (GBP) (Neurontin®, Horizant®, Gralise®) is a widely prescribed medication used primarily for the treatment of epilepsy and neuropathic pain. GBP has a favorable adverse effect profile in therapeutic dosing with the most common reported effects being dizziness, fatigue, drowsiness, weight gain, and periphera...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-015-1193-3

    authors: Cantrell FL,Mena O,Gary RD,McIntyre IM

    更新日期:2015-07-01 00:00:00

  • Proficiency testing for psychoactive substances in Italy.

    abstract::This paper describes the general design and main results of the Italian proficiency testing program for the analysis of psychoactive substances in urine, a long-term initiative created in 1995 on an educational basis and characterized by an innovative internet-based service for data exchange between laboratories and t...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140050279

    authors: Ferrara SD,Brusini G,Maietti S,Frison G,Castagna F,Allevi S,Menegus AM,Tedeschi L

    更新日期:1999-01-01 00:00:00

  • Population data of 30 insertion-deletion markers in four Chinese populations.

    abstract::In this study, we assessed 30 insertion-deletion polymorphisms (Indels) (Investigator DIPplex® kit) in four Chinese populations (n = 952) and evaluated their usefulness in forensic genetic applications. After the Bonferroni correction at a 95 % significance level (p = 0.0017), there were no deviations from the Hardy-W...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-014-1091-0

    authors: Shi M,Liu Y,Bai R,Jiang L,Lv X,Ma S

    更新日期:2015-01-01 00:00:00

  • Estimating trace deposition time with circadian biomarkers: a prospective and versatile tool for crime scene reconstruction.

    abstract::Linking biological samples found at a crime scene with the actual crime event represents the most important aspect of forensic investigation, together with the identification of the sample donor. While DNA profiling is well established for donor identification, no reliable methods exist for timing forensic samples. He...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-010-0457-1

    authors: Ackermann K,Ballantyne KN,Kayser M

    更新日期:2010-09-01 00:00:00

  • Genetic polymorphisms of 32 Y-STR loci in Meizhou Hakka population.

    abstract::Using AGCU Y24 Plus PCR Amplification Kit, 32 Y short tandem repeat (STR) loci were analyzed in 355 unrelated male participants of Meizhou city in Guangdong Province of China. By analyzing 341 different haplotypes, it was found that haplotype diversity (HD) and discrimination capacity (DC) were 0.9995 and 0.9605, resp...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-018-1845-1

    authors: Du W,Wu W,Wu Z,Guo L,Wang B,Chen L

    更新日期:2019-03-01 00:00:00

  • VWA STR genotyping: further inconsistencies between Perkin-Elmer and Promega kits.

    abstract::We report a simultaneous study of the VWA STR locus by the Perkin-Elmer Profiler Plus kit and the Promega GenePrint CTTv kit in a population sample from North Portugal and in 418 meiosis from family material and paternity cases. PCR amplification and genotyping were performed according to the manufacturer's instructio...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140100215

    authors: Alves C,Amorim A,Gusmão L,Pereira L

    更新日期:2001-10-01 00:00:00

  • The application of mitochondrial DNA typing to the study of white Caucasian genetic identification.

    abstract::Mitochondrial DNA (mtDNA) from 100 unrelated British White Caucasians was extracted, amplified and directly sequenced. Sequences of approximately 800 nucleotides were obtained from 2 hypervariable segments within the non-coding region of the mitochondrial genome. A total of 91 different sequences were observed with an...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/BF01225046

    authors: Piercy R,Sullivan KM,Benson N,Gill P

    更新日期:1993-01-01 00:00:00

  • Capillary zone electrophoresis and artificial neural networks for estimation of the post-mortem interval (PMI) using electrolytes measurements in human vitreous humour.

    abstract::Determination of electrolyte concentrations (mainly potassium) in vitreous humour has long been considered an important tool in human death investigations for the estimation of the post-mortem interval (PMI). On the basis of its well known potential in ion analysis, capillary zone electrophoresis (CZE) has recently be...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140100239

    authors: Bocaz-Beneventi G,Tagliaro F,Bortolotti F,Manetto G,Havel J

    更新日期:2002-02-01 00:00:00

  • Evaluation of chronological age based on third molar development in the Spanish population.

    abstract::A cross-sectional study was carried out to assess chronological age estimation based on the stages of third lower molar development, following the eight stages (A-H) method of Demirjian et al. The final sample consisted of 1,054 orthopantomograms from Spanish individuals of known chronological age (range 14-21 years) ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-005-0530-3

    authors: Prieto JL,Barbería E,Ortega R,Magaña C

    更新日期:2005-11-01 00:00:00

  • Fatal intoxication by intravenous injection of castor bean (Ricinus communis L.) extract-a case study.

    abstract::A case report of a 25-year-old man who committed suicide by intravenous injection himself of an aqueous home-made castor bean extract is presented. The patient was hospitalized and treated symptomatically and was released at its own request fourth day after intoxication. The next day, the patient's condition deteriora...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-020-02340-x

    authors: Staňková M,Handlos P,Švidrnoch M,Maier V

    更新日期:2020-11-01 00:00:00

  • DNA methylation levels and telomere length in human teeth: usefulness for age estimation.

    abstract::In the last decade, increasing knowledge of epigenetics has led to the development of DNA methylation-based models to predict age, which have shown high predictive accuracy. However, despite the value of teeth as forensic samples, few studies have focused on this source of DNA. This study used bisulfite pyrosequencing...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-019-02242-7

    authors: Márquez-Ruiz AB,González-Herrera L,Luna JD,Valenzuela A

    更新日期:2020-03-01 00:00:00

  • Development of two multiplex PCR systems for the analysis of 14 X-chromosomal STR loci in a southern Brazilian population sample.

    abstract::We developed two multiplex systems for the coamplification of X-chromosomal short tandem repeats (STRs). X-Multiplex 1 consisted of DXS6807, DXS6800, DXS7424, DXS101, GATA172D05 and HPRTB and X-Multiplex 2 consisted of DXS8378, DXS9898, DXS6801, DXS6809, DXS6789, DXS7133, DXS8377 and DXS7423. In addition, we present a...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-011-0629-7

    authors: Penna LS,Silva FG,Salim PH,Ewald G,Jobim M,Magalhães JA,Jobim LF

    更新日期:2012-03-01 00:00:00

  • X-chromosome STR sequence variation, repeat structure, and nomenclature in humans and chimpanzees.

    abstract::Qualitative information on the sequence composition of the allele and locus structure of the X-STRs DXS8378, DXS9898, DXS6789, GATA31E08, and GATA172D05 was generated in this study. Sequence data were obtained from chimpanzees (Pan troglodytes) and diverse human population groups including Africans, Caucasians, Asians...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-008-0303-x

    authors: Gomes I,Prinz M,Pereira R,Bieschke E,Mayr WR,Amorim A,Carracedo A,Gusmão L

    更新日期:2009-03-01 00:00:00

  • Myeloperoxidase activity in skin lesions. I. Influence of the loss of blood, depth of excoriations and thickness of the skin.

    abstract::The measurement of the myeloperoxidase activity was used to quantify the acute granulocyte reaction. A 35% loss of blood resulted in a clear decrease of the myeloperoxidase activity at the edges of experimental incision wounds in rat skin in the first day after inflicting the wounds. After 12 h only about one-third an...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140050101

    authors: Laiho K

    更新日期:1998-01-01 00:00:00

  • Insertion-deletion polymorphisms--utilization on forensic analysis.

    abstract::Insertion-deletion (INDEL) markers are very frequent in the human genome and present several advantages for population and forensic studies, such as low mutation rates, easy interpretation, small amplicons, easy genotyping, and the possibility of using multiplex PCR. The great adaptability of INDELs for amplification ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-011-0588-z

    authors: da Costa Francez PA,Rodrigues EM,de Velasco AM,dos Santos SE

    更新日期:2012-07-01 00:00:00

  • Postmortem serum protein growth arrest-specific 6 levels in sepsis-related deaths.

    abstract::Growth arrest-specific 6 (Gas6) is widely expressed in leukocytes, platelets, endothelial cells, and monocytes. It regulates various processes including granulocyte adhesion to the endothelium, cell migration, thrombus stabilization, and cytokine release. In humans, increased plasma Gas6 levels have been described in ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-015-1230-2

    authors: Palmiere C,Augsburger M

    更新日期:2015-09-01 00:00:00

  • Validation of adequate endogenous reference genes for the normalisation of qPCR gene expression data in human post mortem tissue.

    abstract::Gene expression analyses based on messenger RNA (mRNA) profiling require accurate data normalisation. When using endogenous reference genes, these have to be validated carefully. Therefore, we examined the transcript stability of 10 potential reference genes using quantitative real-time polymerase chain reaction: beta...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-010-0433-9

    authors: Koppelkamm A,Vennemann B,Fracasso T,Lutz-Bonengel S,Schmidt U,Heinrich M

    更新日期:2010-09-01 00:00:00