Recurrence of WHV integration in the b3n locus in woodchuck hepatocellular carcinoma.

Abstract:

:Frequent occurrence of woodchuck hepatitis virus DNA (WHV DNA) integration into or in proximity to myc oncogenes and in the win locus of cellular genome in woodchuck hepatocellular carcinomas (HCC) has been described by several authors. We report a further cellular locus as a recurrent target for WHV integration in woodchuck HCCs. A WHV DNA integration and its cellular flanking regions were cloned from a HCC developed in a chronically WHV-infected woodchuck. Sequence analysis showed integration of rearranged C, PreS1, and 5' truncated X regions of the WHV genome, located in a cellular locus previously described for WHV integration in another woodchuck HCC. The two integration sites are only about 0.5 kb apart. In addition to Alu-like repeats and a gag-like coding region, previously described, we found several features of MAR (matrix attachment region) chromosomal sequences in the normal cellular locus, leading us to predict that part of it might be a previously unrecognized MAR.

journal_name

Virology

journal_title

Virology

authors

Bruni R,Argentini C,D'Ugo E,Giuseppetti R,Ciccaglione AR,Rapicetta M

doi

10.1006/viro.1995.9936

subject

Has Abstract

pub_date

1995-12-01 00:00:00

pages

229-34

issue

1

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(85)79936-9

journal_volume

214

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Insertion and deletion mutants of vaccinia virus.

    abstract::Thirteen viable insertion mutants of vaccinia virus have been constructed. These mutants, containing coding sequences of the herpes simplex virus thymidine kinase (HSV-TK) gene, were generated by marker transfer via in vivo recombination. The mutants were identified using a replica filter plating technique by in situ ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90132-7

    authors: Perkus ME,Panicali D,Mercer S,Paoletti E

    更新日期:1986-07-30 00:00:00

  • Rescue of a Sendai virus DI genome by other parainfluenza viruses: implications for genome replication.

    abstract::Using a defective interfering Sendai virus stock (DIH4) freed of nondefective helper virus, we found that the closely related parainfluenza viruses 1 and 3 could substitute for the Sendai virus helper in replicating DIH4, creating chimeric nucleocapsids. The morbillivirus measles and the rhabdovirus VSV could not subs...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90660-4

    authors: Curran JA,Kolakofsky D

    更新日期:1991-05-01 00:00:00

  • Preclinical evaluation of cellular immune responses elicited by a polyvalent DNA prime/protein boost HIV-1 vaccine.

    abstract::While DNA vaccines have been shown to prime cellular immune responses, levels are often low in nonhuman primates or humans. Hence, efforts have been directed toward boosting responses by combining DNA with different vaccination modalities. To this end, a polyvalent DNA prime/protein boost vaccine, consisting of codon ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2005.10.038

    authors: Cristillo AD,Wang S,Caskey MS,Unangst T,Hocker L,He L,Hudacik L,Whitney S,Keen T,Chou TH,Shen S,Joshi S,Kalyanaraman VS,Nair B,Markham P,Lu S,Pal R

    更新日期:2006-03-01 00:00:00

  • Comparison of human, simian, and bovine rotaviruses for requirement of sialic acid in hemagglutination and cell adsorption.

    abstract::Human rotaviruses (Wa, KUN, MO) showed hemagglutination (HA) only with fixed 1-day-old chicken erythrocytes, and their HA activities were completely destroyed by trypsin activation of virions. Simian SA-11 and bovine NCDV had HA activities not only against fixed erythrocytes but also against fresh erythrocytes from va...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90121-9

    authors: Fukudome K,Yoshie O,Konno T

    更新日期:1989-09-01 00:00:00

  • Alteration of intrahepatic cytokine expression and AP-1 activation in transgenic mice expressing hepatitis C virus core protein.

    abstract::Hepatitis C virus (HCV) infection often leads to the development of hepatocellular carcinoma (HCC), but its molecular mechanism has not been clearly elucidated. Previously, transgenic mice constitutively expressing HCV core protein have been shown to develop HCC, suggesting a pivotal role of the core protein in hepato...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1702

    authors: Tsutsumi T,Suzuki T,Moriya K,Yotsuyanagi H,Shintani Y,Fujie H,Matsuura Y,Kimura S,Koike K,Miyamura T

    更新日期:2002-12-20 00:00:00

  • HF1 and HF2: novel bacteriophages of halophilic archaea.

    abstract::Two novel halophilic archaebacterial bacteriophages, HF1 and HF2, were isolated from an Australian solar saltern. They were morphologically identical with icosahedral-shaped heads (diameter 58 nm) and contractile tails (length 94 nm). Other similarities included sensitivity to reduced ionic conditions, similar protein...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1643

    authors: Nuttall SD,Dyall-Smith ML

    更新日期:1993-12-01 00:00:00

  • Mapping nucleotides in the 126-kDa protein gene that control the differential symptoms induced by two strains of tobacco mosaic virus.

    abstract::The differential symptom determinants of the Holmes' masked (M) and U1 strains of tobacco mosaic virus previously were mapped to the 5'-coterminal open reading frame (ORF) encoding the 126-kDa protein and the N-terminal two-thirds of the 183-kDa protein. Both proteins influence viral RNA accumulation, but the function...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0368

    authors: Shintaku MH,Carter SA,Bao Y,Nelson RS

    更新日期:1996-07-01 00:00:00

  • Sequences homologous to two separate transforming regions of herpes simplex virus DNA are linked in two human genital tumors.

    abstract::Ten human genital invasive squamous cell carcinomas and five human premalignant tissues were analyzed for the presence of selected sets of herpes simplex virus 2 (HSV-2) DNA sequences. Two vulvar tumors and one vulvar dysplastic tissue were found to contain DNA sequences homologous to the BglII O fragment (coordinates...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90179-0

    authors: Manservigi R,Cassai E,Deiss LP,Di Luca D,Segala V,Frenkel N

    更新日期:1986-11-01 00:00:00

  • Studies of influenza haemagglutinin-mediated membrane fusion.

    abstract::A resonance energy transfer assay of membrane fusion developed by P. S. Uster and D. W. Deamer (Biochemistry 24, 1-8 (1985)) was used in a study of influenza haemagglutinin-mediated fusion. The characteristics of fusion and haemolysis by X-31 (H3N2) virus, a number of mutants of X-31 which fuse membranes at higher pH,...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90083-8

    authors: Wharton SA,Skehel JJ,Wiley DC

    更新日期:1986-02-01 00:00:00

  • Enteric adenovirus type 40:E1B transcription map and identification of novel E1A-E1B cotranscripts in lytically infected cells.

    abstract::Adenovirus 40 (Ad40) is defective for growth in tissue culture but is complemented when the Ad2/5 or Ad12 E1B 55K protein is supplied in trans. Ad40 E1B mRNA has not been detected in E1-transformed cells, or at early times in lytically infected cells. In cells constitutively expressing the E1B region of Ad2, Ad40 E1B ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90478-t

    authors: Steinthorsdottir V,Mautner V

    更新日期:1991-03-01 00:00:00

  • Transcriptional repression of K-Rta by Kaposi's sarcoma-associated herpesvirus K-bZIP is not required for oriLyt-dependent DNA replication.

    abstract::Kaposi's sarcoma-associated herpesvirus origin-dependent DNA replication requires the core replication proteins plus K-Rta and K-bZIP. To determine which K-bZIP protein domains contribute to oriLyt-dependent DNA replication and facilitate suppression of K-Rta-mediated transcriptional activation, we generated a series ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2007.08.019

    authors: Rossetto C,Gao Y,Yamboliev I,Papousková I,Pari G

    更新日期:2007-12-20 00:00:00

  • Identification of a 1.6 kb genome locus of guinea pig cytomegalovirus required for efficient viral growth in animals but not in cell culture.

    abstract::Guinea pig cytomegalovirus (GPCMV) provides a useful model for studies of congenital CMV infection. During characterization of the GPCMV genome sequence, we identified two types of strains in a virus stock purchased from ATCC. One of them, GPCMV/del, lacks a 1.6 kb locus that positionally corresponds to murine CMV (MC...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.06.018

    authors: Nozawa N,Yamamoto Y,Fukui Y,Katano H,Tsutsui Y,Sato Y,Yamada S,Inami Y,Nakamura K,Yokoi M,Kurane I,Inoue N

    更新日期:2008-09-15 00:00:00

  • Reovirus exists in the form of 13 particle species that differ in their content of protein sigma 1.

    abstract::When electrophoresed in 0.7% agarose gels, populations of reovirus particles can be resolved into 13 well-defined bands that possess from 0 to 12 projection/spike-associated trimers of protein sigma 1. This state of affairs is not an artifact of purification, of the techniques used to demonstrate it, of aggregation, o...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1295

    authors: Larson SM,Antczak JB,Joklik WK

    更新日期:1994-06-01 00:00:00

  • Effect of Ku80 depletion on the preintegrative steps of HIV-1 replication in human cells.

    abstract::To gain new insights regarding the role of Ku, the DNA-PK DNA-binding component, during lentiviral DNA integration, we have investigated the HIV-1 replication in Ku80-depleted human cells. CEM4fx cells underexpressing the Ku80 factor were selected after transduction by a retroviral vector expressing the Ku80 full-leng...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1515

    authors: Jeanson L,Subra F,Vaganay S,Hervy M,Marangoni E,Bourhis J,Mouscadet JF

    更新日期:2002-08-15 00:00:00

  • Mutations of amino acids in the DNA-recognition domain of Epstein-Barr virus ZEBRA protein alter its sub-nuclear localization and affect formation of replication compartments.

    abstract::ZEBRA, a transcription factor and DNA replication protein encoded by the Epstein-Barr virus (EBV) BZLF1 gene, plays indispensable roles in the EBV lytic cycle. We recently described the phenotypes of 46 single amino acid substitutions introduced into the DNA-recognition region of ZEBRA [Heston, L., El-Guindy, A., Coun...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.09.009

    authors: Park R,Heston L,Shedd D,Delecluse HJ,Miller G

    更新日期:2008-12-20 00:00:00

  • Inhibition of phage phi 29 assembly by antisense oligonucleotides targeting viral pRNA essential for DNA packaging.

    abstract::A sensitive and efficient system for the functional assay of antisense oligonucleotides (oligos) was developed based on an in vitro viral assembly system. A 120-base RNA (pRNA), which indispensably participates in bacteriophage phi 29 DNA packaging, was the target for antisense action. Antisense oligos bound to pRNA, ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1439

    authors: Zhang C,Garver K,Guo P

    更新日期:1995-08-20 00:00:00

  • Identification of murine T-cell epitopes in Ebola virus nucleoprotein.

    abstract::CD8 T cells play an important role in controlling Ebola infection and in mediating vaccine-induced protective immunity, yet little is known about antigenic targets in Ebola that are recognized by CD8 T cells. Overlapping peptides were used to identify major histocompatibility complex class I-restricted epitopes in mic...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2003.09.016

    authors: Simmons G,Lee A,Rennekamp AJ,Fan X,Bates P,Shen H

    更新日期:2004-01-05 00:00:00

  • Turnip crinkle virus infection from RNA synthesized in vitro.

    abstract::Genome-length cDNA clones of turnip crinkle virus (TCV) were constructed with SmaI and XbaI restriction sites engineered at the 5' and 3' termini, respectively. The genome-length cDNAs were positioned downstream of modified lambda and T7 phage promoters such that in vitro transcription resulted in RNAs with 5 extra nu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90368-1

    authors: Heaton LA,Carrington JC,Morris TJ

    更新日期:1989-05-01 00:00:00

  • Porcine endogenous retroviruses inhibit human immune cell function: risk for xenotransplantation?

    abstract::Transgenic pigs are currently the most favored potential source of organs for xenotransplantation. Like all mammalian species they all harbor endogenous retroviruses in their genome. These porcine endogenous retroviruses (PERVs) are produced from several primary cells and cell lines and are able to infect human cells....

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.0149

    authors: Tacke SJ,Kurth R,Denner J

    更新日期:2000-03-01 00:00:00

  • The V protein of human parainfluenza virus type 2 promotes RhoA-induced filamentous actin formation.

    abstract::We previously demonstrated that human parainfluenza virus type 2 (hPIV-2) induces RhoA activation, which promotes its growth. RhoA controls the equilibrium between globular and filamentous actin (F-actin). We found that F-actin formation is induced by wild type (wt) hPIV-2 infection, and that inhibition of F-actin for...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2018.08.015

    authors: Ohta K,Matsumoto Y,Yumine N,Nishio M

    更新日期:2018-11-01 00:00:00

  • Escape variants of the XPR1 gammaretrovirus receptor are rare due to reliance on a splice donor site and a short hypervariable loop.

    abstract::Entry determinants in the XPR1 receptor for the xenotropic/polytropic mouse leukemia viruses (XP-MLVs) lie in its third and fourth putative extracellular loops (ECLs). The critical ECL3 receptor determinant overlies a splice donor and is evolutionarily conserved in vertebrate XPR1 genes; 2 of the 3 rare replacement mu...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.07.049

    authors: Lu X,Martin C,Bouchard C,Kozak CA

    更新日期:2014-11-01 00:00:00

  • Study of genetic reassortment between two human rotaviruses.

    abstract::Eight different human rotavirus strains were adapted to replicate in cell culture. In vitro, rotavirus genetic reassortment has been performed between two virus strains, one with a long pattern of segmented genomic RNAs and the other with a short pattern in the electrophoretic mobility of genomic RNAs. This genetic re...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90381-7

    authors: Garbarg-Chenon A,Bricout F,Nicolas JC

    更新日期:1984-12-01 00:00:00

  • HPV16 E1--E4 protein is phosphorylated by Cdk2/cyclin A and relocalizes this complex to the cytoplasm.

    abstract::The human papillomavirus type 16 E1--E4 protein is expressed abundantly in cells supporting viral DNA amplification, but its expression is lost during malignant progression. In cell culture, 16E1--E4 causes G2 cell cycle arrest by associating with and preventing the nuclear entry of Cdk1/cyclin B1 complexes. Here, we ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.02.024

    authors: Davy CE,Ayub M,Jackson DJ,Das P,McIntosh P,Doorbar J

    更新日期:2006-05-25 00:00:00

  • Analysis of the site occupancy constraints of primary amino acid sequences in the motif directing palmitylation of the vaccinia virus 37-kDa envelope protein.

    abstract::Vaccinia virus (VV) encodes a 37-kDa envelope protein (p37) that is palmitylated on cysteine residues 185186 of the 372-amino acid protein. We have previously reported on a loosely conserved consensus motif. Further analysis has identified a conserved consensus sequence, Hydro*AAC(C)A (Hydro* represents a hydrophobic ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1998.9543

    authors: Hansen SG,Grosenbach DW,Hruby DE

    更新日期:1999-02-01 00:00:00

  • Epstein-Barr virus replicative gene transcription during de novo infection of human thymocytes: simultaneous early expression of BZLF-1 and its repressor RAZ.

    abstract::Epstein-Barr virus (EBV) is known to infect B cells and epithelial cells. We and others have shown that EBV can also infect a subset of thymocytes. Infection of thymocytes was accompanied by the appearance of linear EBV genome within 8 hr of infection. Circularization of the EBV genome was not detected. This is in con...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1200

    authors: Kelleher CA,Paterson RK,Dreyfus DH,Streib JE,Xu JW,Takase K,Jones JF,Gelfand EW

    更新日期:1995-04-20 00:00:00

  • Immunological detection of proteins associated with the Epstein-Barr virus nuclear antigen 2A.

    abstract::The Epstein-Barr virus nuclear antigen 2A (EBNA-2A) has been strongly implicated in the EBV-mediated B-cell transformation process. Since EBNA-2A might exert this function through interaction with proteins of the infected cell, we studied the association of EBNA-2A with cellular proteins. Immunoprecipitation of EBNA-2...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1993.1406

    authors: Grässer FA,Sauder C,Haiss P,Hille A,König S,Göttel S,Kremmer E,Leinenbach HP,Zeppezauer M,Mueller-Lantzsch N

    更新日期:1993-08-01 00:00:00

  • Vaccinia topoisomerase mutants illuminate roles for Phe59, Gly73, Gln69 and Phe215.

    abstract::Vaccinia topoisomerase provides a model system for structure-function analysis of the type IB topoisomerase family. Here we performed an alanine scan of eight positions in the beta4 and beta5 strands of the N-terminal domain (Leu57, Ile58, Phe59, Val60, Gly61, Ser62, Gln69 and Gly73) and eight positions in the alpha8-...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2006.08.056

    authors: Tian L,Shuman S

    更新日期:2007-03-15 00:00:00

  • Glycoprotein E (gE) specified by bovine herpesvirus type 5 (BHV-5) enables trans-neuronal virus spread and neurovirulence without being a structural component of enveloped virions.

    abstract::Bovine herpesvirus 5 (BHV-5) is a neurovirulent alpha-herpesvirus that causes fatal encephalitis in calves. We previously demonstrated that deletion of a glycine-rich epitope in the gE ectodomain dramatically reduced BHV-5 neurovirulence. To investigate the role of gE cytoplasmic tail sequences in the neuropathogenesi...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2007.03.040

    authors: Al-Mubarak A,Simon J,Coats C,Okemba JD,Burton MD,Chowdhury SI

    更新日期:2007-09-01 00:00:00

  • The capsid-coding region hairpin element (cHP) is a critical determinant of dengue virus and West Nile virus RNA synthesis.

    abstract::Dengue virus (DENV) and West Nile virus (WNV) are members of the Flavivirus genus of positive-strand RNA viruses. RNA sequences and structures, primarily in the untranslated regions, have been shown to modulate flaviviral gene expression and genome replication. Previously, we demonstrated that a structure in the DENV ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.06.034

    authors: Clyde K,Barrera J,Harris E

    更新日期:2008-09-30 00:00:00

  • Mutational analysis of the Sendai virus V protein: importance of the conserved residues for Zn binding, virus pathogenesis, and efficient RNA editing.

    abstract::The V protein of Sendai virus (SeV) is nonessential for virus replication in cell culture but indispensable for viral pathogenicity in mice. At the C terminus of the V protein, there are amino acid residues conserved among the members of the Paramyxovinae subfamily that are clustered in three regions: region I, just d...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1516

    authors: Fukuhara N,Huang C,Kiyotani K,Yoshida T,Sakaguchi T

    更新日期:2002-08-01 00:00:00