Interaction of poly(rC) binding protein 2 with the 5' noncoding region of hepatitis A virus RNA and its effects on translation.

Abstract:

:Utilization of internal ribosome entry segment (IRES) structures in the 5' noncoding region (5'NCR) of picornavirus RNAs for initiation of translation requires a number of host cell factors whose distribution may vary in different cells and whose requirement may vary for different picornaviruses. We have examined the requirement of the cellular protein poly(rC) binding protein 2 (PCBP2) for hepatitis A virus (HAV) RNA translation. PCBP2 has recently been identified as a factor required for translation and replication of poliovirus (PV) RNA. PCBP2 was shown to be present in FRhK-4 cells, which are permissive for growth of HAV, as it is in HeLa cells, which support translation of HAV RNA but which have not been reported to host replication of the virus. Competition RNA mobility shift assays showed that the 5'NCR of HAV RNA competed for binding of PCBP2 with a probe representing stem-loop IV of the PV 5'NCR. The binding site on HAV RNA was mapped to nucleotides 1 to 157, which includes a pyrimidine-rich sequence. HeLa cell extracts that had been depleted of PCBP2 by passage over a PV stem-loop IV RNA affinity column supported only low levels of HAV RNA translation. Translation activity was restored upon addition of recombinant PCBP2 to the depleted extract. Removal of the 5'-terminal 138 nucleotides of the HAV RNA, or removal of the entire IRES, eliminated the dependence of HAV RNA translation on PCBP2.

journal_name

J Virol

journal_title

Journal of virology

authors

Graff J,Cha J,Blyn LB,Ehrenfeld E

doi

10.1128/JVI.72.12.9668-9675.1998

subject

Has Abstract

pub_date

1998-12-01 00:00:00

pages

9668-75

issue

12

eissn

0022-538X

issn

1098-5514

journal_volume

72

pub_type

杂志文章
  • Inactivation of Genes by Frameshift Mutations Provides Rapid Adaptation of an Attenuated Vaccinia Virus.

    abstract::Unlike RNA viruses, most DNA viruses replicate their genomes with high-fidelity polymerases that rarely make base substitution errors. Nevertheless, experimental evolution studies have revealed rapid acquisition of adaptive mutations during serial passage of attenuated vaccinia virus (VACV). One way in which adaptatio...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01053-20

    authors: Senkevich TG,Zhivkoplias EK,Weisberg AS,Moss B

    更新日期:2020-08-31 00:00:00

  • Aerosol transmission of chronic wasting disease in white-tailed deer.

    abstract::While the facile transmission of chronic wasting disease (CWD) remains incompletely elucidated, studies in rodents suggest that exposure of the respiratory mucosa may be an efficient pathway. The present study was designed to address this question in the native cervid host. Here, we demonstrate aerosol transmission of...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02852-12

    authors: Denkers ND,Hayes-Klug J,Anderson KR,Seelig DM,Haley NJ,Dahmes SJ,Osborn DA,Miller KV,Warren RJ,Mathiason CK,Hoover EA

    更新日期:2013-02-01 00:00:00

  • Evolutionarily conserved function of a viral microRNA.

    abstract::MicroRNAs (miRNAs) are potent RNA regulators of gene expression. Some viruses encode miRNAs, most of unknown function. The majority of viral miRNAs are not conserved, and whether any have conserved functions remains unclear. Here, we report that two human polyomaviruses associated with serious disease in immunocomprom...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01144-08

    authors: Seo GJ,Fink LH,O'Hara B,Atwood WJ,Sullivan CS

    更新日期:2008-10-01 00:00:00

  • Channel-Inactivating Mutations and Their Revertant Mutants in the Envelope Protein of Infectious Bronchitis Virus.

    abstract::It has been shown previously in the severe acute respiratory syndrome coronavirus (SARS-CoV) that two point mutations, N15A and V25F, in the transmembrane domain (TMD) of the envelope (E) protein abolished channel activity and led to in vivo attenuation. Pathogenicity was recovered in mutants that also regained E prot...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02158-16

    authors: To J,Surya W,Fung TS,Li Y,Verdià-Bàguena C,Queralt-Martin M,Aguilella VM,Liu DX,Torres J

    更新日期:2017-02-14 00:00:00

  • Identification of nitric oxide synthase 2 as an innate resistance locus against ectromelia virus infection.

    abstract::To assess whether nitric oxide synthase 2 (NOS2) fulfills the criteria of an innate resistance locus against an acute viral infection, we inoculated genetically deficient NOS2-/- mice with virulent ectromelia virus (EV), the causative agent of mousepox. NOS2-/- mice proved highly susceptible to EV yet showed no diminu...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.9.7703-7706.1998

    authors: Karupiah G,Chen JH,Nathan CF,Mahalingam S,MacMicking JD

    更新日期:1998-09-01 00:00:00

  • Replacement of the Epstein-Barr virus plasmid with the EBER plasmid in Burkitt's lymphoma cells.

    abstract::Transfection of an Epstein-Barr virus (EBV)-encoded plasmid containing EBER caused a substantial decrease in the level of plasmid containing EBV in Akata and Mutu Burkitt's lymphoma (BL) lines, but failed to do so in other BL lines. The results suggest that EBER could replace the role of EBV, but other EBV products al...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.20.9977-9982.2001

    authors: Maruo S,Nanbo A,Takada K

    更新日期:2001-10-01 00:00:00

  • Virus attenuation and identification of structural proteins of vaccinia virus that are selectively modified during virus persistence.

    abstract::To investigate the genetic stability of vaccinia virus DNA, we have tested whether alterations occurred in the polypeptide composition of this complex virus during persistent infections. We found that variants isolated at various passages in Friend erythroleukemia cells persistently infected with vaccinia virus contai...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.61.8.2642-2647.1987

    authors: Paez E,Dallo S,Esteban M

    更新日期:1987-08-01 00:00:00

  • Efficient lymphoreticular prion propagation requires PrP(c) in stromal and hematopoietic cells.

    abstract::In most prion diseases, infectivity accumulates in lymphoreticular organs early after infection. Defects in hematopoietic compartments, such as impaired B-cell maturation, or in stromal compartments, such as abrogation of follicular dendritic cells, can delay or prevent lymphoreticular prion colonization. However, the...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.15.7097-7106.2001

    authors: Kaeser PS,Klein MA,Schwarz P,Aguzzi A

    更新日期:2001-08-01 00:00:00

  • Hepatitis delta virus genome replication: a polyadenylated mRNA for delta antigen.

    abstract::Hepatitis delta virus (HDV) replicates its genome in the nucleus of an infected cell. However, an unsolved problem has been the identification in the cytoplasm of a putative mRNA for the synthesis of the only virus-coded protein, the delta antigen. We now report the characterization of an 800-base RNA that is cytoplas...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.7.3192-3198.1990

    authors: Hsieh SY,Chao M,Coates L,Taylor J

    更新日期:1990-07-01 00:00:00

  • Murine cytomegalovirus targets transcription factor ATF4 to exploit the unfolded-protein response.

    abstract::The unfolded-protein response (UPR), activated by sensor molecules PERK, ATF6, and IRE1 to resolve endoplasmic reticulum (ER) stress, has emerged as a key target for host cells and viruses to control the infection outcomes. The UPR regulates ER protein folding, controls cell fate upon ER stress, and plays an important...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00200-12

    authors: Qian Z,Xuan B,Chapa TJ,Gualberto N,Yu D

    更新日期:2012-06-01 00:00:00

  • Regeneration of herpesviruses from molecularly cloned subgenomic fragments.

    abstract::The ability to manipulate the genomes of herpesviruses is of eminent importance for obtaining insight into gene function and regulation of gene expression of these complex viruses. Here we report the use of in vivo overlap recombination to generate pseudorabies virus mutants. Cotransfection of up to five overlapping c...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.62.6.2191-2195.1988

    authors: van Zijl M,Quint W,Briaire J,de Rover T,Gielkens A,Berns A

    更新日期:1988-06-01 00:00:00

  • Transcriptional changes in the brains of cattle orally infected with the bovine spongiform encephalopathy agent precede detection of infectivity.

    abstract::Bovine spongiform encephalopathy (BSE) is a fatal, transmissible, neurodegenerative disease of cattle. BSE can be transmitted experimentally between cattle through the oral route, and in this study, brain tissue samples from animals at different time points postinoculation were analyzed for changes in gene expression....

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00352-09

    authors: Tang Y,Xiang W,Hawkins SA,Kretzschmar HA,Windl O

    更新日期:2009-09-01 00:00:00

  • Synthesis of multimeric polyoma virus DNA in mouse L-cells: role of the tsA1S9 gene product.

    abstract::Several different forms of progeny viral DNA can be identified in polyoma virus (Py)-infected mouse L-cells. The majority comprise mature form I superhelical DNA and the circular, double-stranded "theta" replicating intermediates in which the progeny DNA strands never exceed the unit genome length of the template. The...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.46.3.768-777.1983

    authors: Ganz PR,Sheinin R

    更新日期:1983-06-01 00:00:00

  • The morphology and composition of influenza A virus particles are not affected by low levels of M1 and M2 proteins in infected cells.

    abstract::We generated a recombinant influenza A virus (Mmut) that produced low levels of matrix (M1) and M2 proteins in infected cells. Mmut virus propagated to significantly lower titers than did wild-type virus in cells infected at low multiplicity. By contrast, virion morphology and incorporation of viral proteins and vRNAs...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.12.7926-7932.2005

    authors: Bourmakina SV,García-Sastre A

    更新日期:2005-06-01 00:00:00

  • NF-κB-Interacting Long Noncoding RNA Regulates HIV-1 Replication and Latency by Repressing NF-κB Signaling.

    abstract::NF-κB-interacting long noncoding RNA (NKILA) was recently identified as a negative regulator of NF-κB signaling and plays an important role in the development of various cancers. It is well known that NF-κB-mediated activation of human immunodeficiency virus type 1 (HIV-1) long terminal repeat (LTR)-driven gene expres...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01057-20

    authors: Wang H,Liu Y,Huan C,Yang J,Li Z,Zheng B,Wang Y,Zhang W

    更新日期:2020-08-17 00:00:00

  • SUN2 Overexpression Deforms Nuclear Shape and Inhibits HIV.

    abstract:UNLABELLED:In a previous screen of putative interferon-stimulated genes, SUN2 was shown to inhibit HIV-1 infection in an uncharacterized manner. SUN2 is an inner nuclear membrane protein belonging to the linker of nucleoskeleton and cytoskeleton complex. We have analyzed here the role of SUN2 in HIV infection. We repor...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.03202-15

    authors: Donahue DA,Amraoui S,di Nunzio F,Kieffer C,Porrot F,Opp S,Diaz-Griffero F,Casartelli N,Schwartz O

    更新日期:2016-03-28 00:00:00

  • Protection against homologous but not heterologous challenge induced by inactivated feline immunodeficiency virus vaccines.

    abstract::Whole inactivated virus vaccines from the FL4 cell line protected against challenge with homologous feline immunodeficiency virus (Petaluma strain) but not against a heterologous FIV isolate (GL-8) which is distinct from the Petaluma strain in virus neutralization. Protection was associated with a type-specific neutra...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.69.2.1253-1255.1995

    authors: Hosie MJ,Osborne R,Yamamoto JK,Neil JC,Jarrett O

    更新日期:1995-02-01 00:00:00

  • Primary B-cell infection with a deltaBALF4 Epstein-Barr virus comes to a halt in the endosomal compartment yet still elicits a potent CD4-positive cytotoxic T-cell response.

    abstract::Epstein-Barr virus (EBV) infection is mediated by several viral envelope glycoproteins. We have assessed gp110's functions during the virus life cycle using a mutant that lacks BALF4 (DeltaBALF4). Exposure of various cell lines and primary cell samples of epithelial or lymphoid lineages to the DeltaBALF4 mutant failed...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01613-08

    authors: Neuhierl B,Feederle R,Adhikary D,Hub B,Geletneky K,Mautner J,Delecluse HJ

    更新日期:2009-05-01 00:00:00

  • Imparting temperature sensitivity and attenuation in ferrets to A/Puerto Rico/8/34 influenza virus by transferring the genetic signature for temperature sensitivity from cold-adapted A/Ann Arbor/6/60.

    abstract::The four temperature-sensitive (ts) loci identified in the PB1 and PB2 gene segments of cold-adapted A/Ann Arbor/6/60 influenza virus, the master donor virus for influenza A virus (MDV-A) FluMist vaccines, were introduced into a divergent A/Puerto Rico/8/34 influenza virus strain. Recombinant A/Puerto Rico/8/34 virus ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.78.2.995-998.2004

    authors: Jin H,Zhou H,Lu B,Kemble G

    更新日期:2004-01-01 00:00:00

  • Control of adeno-associated virus type 2 cap gene expression: relative influence of helper virus, terminal repeats, and Rep proteins.

    abstract::Adeno-associated virus type 2 (AAV-2) gene expression is tightly controlled by functions of the helper virus as well as by the products of its own viral rep gene. Double-immunofluorescence studies of Rep and VP protein expression in cells coinfected with AAV-2 and adenovirus type 2 showed that a large proportion of th...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.11.8437-8447.1997

    authors: Weger S,Wistuba A,Grimm D,Kleinschmidt JA

    更新日期:1997-11-01 00:00:00

  • JC virus DNA is present in many human brain samples from patients without progressive multifocal leukoencephalopathy.

    abstract::Sections of normal and diseased brain and kidney tissues were screened for the presence of JC virus (JCV) DNA by using the polymerase chain reaction. As expected, all samples obtained from patients with progressive multifocal leukoencephalopathy (PML) tested positive when multiple JCV-specific primer and probe combina...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.66.10.5726-5734.1992

    authors: White FA 3rd,Ishaq M,Stoner GL,Frisque RJ

    更新日期:1992-10-01 00:00:00

  • Two proline-rich nuclear localization signals in the amino- and carboxyl-terminal regions of the Borna disease virus phosphoprotein.

    abstract::Borna disease virus (BDV) uses a unique strategy of replication and transcription which takes place in the nucleus, unlike other known, nonsegmented, negative-stranded RNA viruses of animal origin. In this process, viral constituents necessary for replication must be transported to the nucleus from the cytoplasm. We r...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.12.9755-9762.1998

    authors: Shoya Y,Kobayashi T,Koda T,Ikuta K,Kakinuma M,Kishi M

    更新日期:1998-12-01 00:00:00

  • Inhibition of host translation in encephalomyocarditis virus-infected L cells: a novel mechanism.

    abstract::Encephalomyocarditis virus induced a rapid shutoff of host translation in mouse L cells shortly after infection and before viral proteins were made in detectable amounts. This kinetic pattern is similar to that seen in poliovirus-infected HeLa cells. However, the mechanisms of host shutoff are different in these two c...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.43.1.250-261.1982

    authors: Jen G,Thach RE

    更新日期:1982-07-01 00:00:00

  • Uncovering the Repertoire of Endogenous Flaviviral Elements in Aedes Mosquito Genomes.

    abstract::Endogenous viral elements derived from nonretroviral RNA viruses have been described in various animal genomes. Whether they have a biological function, such as host immune protection against related viruses, is a field of intense study. Here, we investigated the repertoire of endogenous flaviviral elements (EFVEs) in...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00571-17

    authors: Suzuki Y,Frangeul L,Dickson LB,Blanc H,Verdier Y,Vinh J,Lambrechts L,Saleh MC

    更新日期:2017-07-12 00:00:00

  • Genetic characterization of the vaccinia virus DNA polymerase: cytosine arabinoside resistance requires a variable lesion conferring phosphonoacetate resistance in conjunction with an invariant mutation localized to the 3'-5' exonuclease domain.

    abstract::In this report, we describe the isolation, molecular genetic mapping, and phenotypic characterization of vaccinia virus mutants resistant to cytosine arabinoside (araC) and phosphonoacetic acid (PAA). At 37 degrees C, 8 microM araC was found to prevent macroscopic plaque formation by wild-type virus and to cause a 10(...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.67.7.4323-4336.1993

    authors: Taddie JA,Traktman P

    更新日期:1993-07-01 00:00:00

  • Signaling through Toll-like receptors induces murine gammaherpesvirus 68 reactivation in vivo.

    abstract::Murine gammaherpesvirus 68 (MHV68) establishes a lifelong infection in mice and is used as a model pathogen to study the role of viral and host factors in chronic infection. The maintenance of chronic MHV68 infection, at least in some latency reservoirs, appears to be dependent on the capacity of the virus to reactiva...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01717-08

    authors: Gargano LM,Forrest JC,Speck SH

    更新日期:2009-02-01 00:00:00

  • Hepatitis delta antigens enhance the ribozyme activities of hepatitis delta virus RNA in vivo.

    abstract::The mechanism of regulation for the ribozyme activity of hepatitis delta virus (HDV) RNA in infected cells is unknown. Previously, we developed a direct assay capable of detecting the ribozyme activity of HDV dimer or trimer RNAs in vivo (K.-S. Jeng, A. Daniel, and M. M. C. Lai, J. Virol, 70:2403-2410, 1996). In this ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.70.7.4205-4209.1996

    authors: Jeng KS,Su PY,Lai MM

    更新日期:1996-07-01 00:00:00

  • Signal peptidase cleavage at the flavivirus C-prM junction: dependence on the viral NS2B-3 protease for efficient processing requires determinants in C, the signal peptide, and prM.

    abstract::Signal peptidase cleavage at the C-prM junction in the flavivirus structural polyprotein is inefficient in the absence of the cytoplasmic viral protease, which catalyzes cleavage at the COOH terminus of the C protein. The signal peptidase cleavage occurs efficiently in circumstances where the C protein is deleted or i...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.3.2141-2149.1998

    authors: Stocks CE,Lobigs M

    更新日期:1998-03-01 00:00:00

  • In vivo and in vitro phosphorylation of rotavirus NSP5 correlates with its localization in viroplasms.

    abstract::NSP5 (NS26), the product of rotavirus gene 11, is a phosphoprotein whose role in the virus replication cycle is unknown. To gain further insight into its function, we obtained monoclonal antibodies against the baculovirus-expressed protein. By immunoprecipitation and immunoblotting experiments, we showed that (i) NSP5...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.1.34-41.1997

    authors: Poncet D,Lindenbaum P,L'Haridon R,Cohen J

    更新日期:1997-01-01 00:00:00

  • Critical chemical features in trans-acting-responsive RNA are required for interaction with human immunodeficiency virus type 1 Tat protein.

    abstract::The human immunodeficiency virus type 1 Tat protein binds to an RNA stem-loop structure called TAR which is present at the 5' end of all human immunodeficiency virus type 1 transcripts. This binding is centered on a bulge within the stem of TAR and is an essential step in the trans-activation process which results in ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.65.10.5196-5202.1991

    authors: Sumner-Smith M,Roy S,Barnett R,Reid LS,Kuperman R,Delling U,Sonenberg N

    更新日期:1991-10-01 00:00:00