Novel recombinant norovirus in Japan.

Abstract:

:Based on the genetic analysis, novel, naturally occurring recombinant norovirus strains were identified in Japan. Breakpoint analysis of recombinant norovirus showed that the recombination site was at the open reading frame ORF1/ORF2 overlap.

journal_name

Virus Genes

journal_title

Virus genes

authors

Dey SK,Phan TG,Mizuguchia M,Okitsua S,Ushijima H

doi

10.1007/s11262-010-0459-6

subject

Has Abstract

pub_date

2010-06-01 00:00:00

pages

362-4

issue

3

eissn

0920-8569

issn

1572-994X

journal_volume

40

pub_type

杂志文章
  • A novel Enterovirus 96 circulating in China causes hand, foot, and mouth disease.

    abstract::Enterovirus 96 (EV-96) is a recently described member of the species Enterovirus C and is associated with paralysis and myelitis. In this study, using metagenomic sequencing, we identified a new enterovirus 96 strain (EV-96-SZ/GD/CHN/2014) as the sole pathogen causing hand, foot, and mouth disease (HFMD). A genomic co...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-017-1431-5

    authors: Xu Y,Sun Y,Ma J,Zhou S,Fang W,Ye J,Tan L,Ji J,Luo D,Li L,Li J,Fang C,Pei N,Shi S,Liu X,Jiang H,Gong S,Xu X

    更新日期:2017-06-01 00:00:00

  • Searching for a new putative cryptic virus in Pinus sylvestris L.

    abstract::Double-stranded RNAs (dsRNAs) were detected in different pine populations in Germany and Hungary. Two dsRNA species of 1.5 and 1.58 kbp, respectively, persisted in the same trees for at least 2 years and their presence was not associated with any symptoms. The dsRNAs were found to sediment in the VLP (virus-like parti...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-005-6874-4

    authors: Veliceasa D,Enünlü N,Kós PB,Köster S,Beuther E,Morgun B,Deshmukh SD,Lukács N

    更新日期:2006-04-01 00:00:00

  • Identification of viral proteins encoded by two DNA fragments of herpesvirus of turkeys (HVT).

    abstract::Herpesvirus of turkeys (HVT) vaccine is used worldwide to immunize chickens against Marek's disease (MD). Polyclonal antiserum directed against one virus cross-reacts with proteins of the other, while only 5% homology at the DNA level was demonstrated between the two viruses. A partial library of HVT DNA fragments ran...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00568972

    authors: Levy H,Maray T,Davidson I,Malkinson M,Becker Y

    更新日期:1991-07-01 00:00:00

  • Analysis of codon usage in Newcastle disease virus.

    abstract::In this study, the relative synonymous codon usage (RSCU) values, effective number of codon (ENC) values, nucleotide contents, and dinucleotide were used to investigate codon usage pattern of each protein-coding gene and genome among 31 Newcastle disease virus (NDV) isolates. The result shows that the overall extent o...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-011-0574-z

    authors: Wang M,Liu YS,Zhou JH,Chen HT,Ma LN,Ding YZ,Liu WQ,Gu YX,Zhang J

    更新日期:2011-04-01 00:00:00

  • Genomic characterization of a slow/low maedi visna virus.

    abstract::The complete genomic sequence of a sheep lentivirus isolate that presents a slow/low phenotype in vitro has been determined. The virus, designated P1OLV, was isolated from lung cells of a naturally infected sheep in Portugal. Three overlapping DNA fragments amplified by PCR, and encompassing the entire viral genome we...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/B:VIRU.0000036380.01957.37

    authors: Barros SC,Ramos F,Duarte M,Fagulha T,Cruz B,Fevereiro M

    更新日期:2004-10-01 00:00:00

  • Variability of E2 protein-coding sequences of bovine viral diarrhea virus in Polish cattle.

    abstract::Bovine viral diarrhea virus (BVDV) belongs to the Pestivirus genus of the Flaviviridae family and has worldwide distribution, being one of the main causes of economic losses in cattle raising. The genome of pestiviruses is a single strand of positive-sense RNA with a length of 12.3 kb, which encodes one open reading f...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-020-01756-2

    authors: Mirosław P,Polak MP

    更新日期:2020-08-01 00:00:00

  • Sequencing and phylogenetic analysis of an avian reovirus genome.

    abstract::Avian reovirus infection causes considerable economic loss to the commercial poultry industry. Live-attenuated vaccine strain S1133 (v-S1133, derived from parent strain S1133) is considered the safest and most effective vaccine and is currently used worldwide. To identify the genes responsible for its attenuation, DNA...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-013-1029-5

    authors: Teng L,Xie Z,Xie L,Liu J,Pang Y,Deng X,Xie Z,Fan Q,Luo S,Feng J,Khan MI

    更新日期:2014-04-01 00:00:00

  • Overall signal sequence hydrophobicity determines the in vivo translocation efficiency of a herpesvirus glycoprotein.

    abstract::We have described three mutant strains of Pseudorabies virus that contain mutations in the signal sequence coding region of a nonessential envelope glycoprotein, gIII. The alterations disrupt, truncate, or eliminate the hydrophobic core domain of the signal sequence. Each mutant was assayed for its ability to promote ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF01702345

    authors: Ryan P,Robbins A,Whealy M,Enquist LW

    更新日期:1993-02-01 00:00:00

  • A novel fusarivirus isolated from the phytopathogenic fungus Nigrospora oryzae.

    abstract::In this study, we report the discovery and molecular characterization of a novel mycovirus, Nigrospora oryzae fusarivirus 1 (NoFV1) isolated from the rice-infecting fungus Nigrospora oryzae. Excluding a poly (A) tail, the genome of the virus is 7004 nucleotide (nt) long containing three putative nonoverlapping open re...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1371-5

    authors: Zhong J,Zhao SQ,Li GF,Pang XD,Deng XJ,Zhu HJ,Da Gao B,Zhou Q

    更新日期:2016-12-01 00:00:00

  • Molecular cloning and characterization of retrovirus-like intracisternal type A particle genes (IAP) present in the Chinese hamster genome.

    abstract::Endogenous retrovirus-like sequences that are homologous to the multigenic murine and Syrian hamster intracisternal type A particle (IAP) genes can be detected in very few copies in the Chinese hamster (CH) genome. They were cloned from a CHO gene library and two recombinants, harboring the major IAP-like DNA genes ch...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00570029

    authors: Servenay M,Kupiec JJ,Peries J,Emanoil-Ravier R

    更新日期:1990-12-01 00:00:00

  • Complete nucleotide sequence, genome organization and phylogenic analysis of the canine calicivirus.

    abstract::The complete genomic sequence of canine calicivirus (CaCV) isolated from feces of a dog with diarrhea was determined. The CaCV genome, a positive-sense single-stranded RNA, contained 8513 nucleotides excluding the poly(A) tail and was longer than that of any other calicivirus strain with a completely known sequence. T...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1020174225622

    authors: Matsuura Y,Tohya Y,Nakamura K,Shimojima M,Roerink F,Mochizuki M,Takase K,Akashi H,Sugimura T

    更新日期:2002-01-01 00:00:00

  • Transmission of cotton leaf curl disease: answer to a long-standing question.

    abstract::Cotton leaf curl disease (CLCuD) has been a major constraint to cotton production across Pakistan and northwestern India since the early 1990s. The disease is caused by a number of begomoviruses, including Cotton leaf curl Multan virus (CLCuMuV), which associate with a specific host range and symptom determining betas...

    journal_title:Virus genes

    pub_type: 信件

    doi:10.1007/s11262-018-1605-9

    authors: Masood M,Briddon RW

    更新日期:2018-12-01 00:00:00

  • Persistence of varicella-zoster virus DNA in blood mononuclear cells of patients with varicella or zoster.

    abstract::Varicella-zoster virus (VZV) DNA was detectable by in-situ hybridization in blood mononuclear cells (MNCs) of patients with varicella or zoster for 2-56 days after the onset of a rash. VZV DNA was present in many MNCs from one acute varicella patient 2 days after the onset of the rash and was rarely found in MNCs duri...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00684037

    authors: Gilden DH,Devlin M,Wellish M,Mahalingham R,Huff C,Hayward A,Vafai A

    更新日期:1989-08-01 00:00:00

  • Nucleotide sequence of the capsid protein gene of potato virus Y (PVY).

    abstract::The nucleotide sequence of the 3' terminal region of potato virus Y (PVY) was determined. Starting with a poly(A) tail of 18 residues a non-coding region of 335 nucleotides precedes the region encoding for the virus coat protein (cp) 801 nucleotides long ending with a TGA. This region was located by comparing the pred...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00572704

    authors: Rosner A,Raccah B

    更新日期:1988-06-01 00:00:00

  • Complete genome sequence of a sapovirus from a child in Zhejiang, China.

    abstract::Although Sapovirus (Caliciviridae) has been accepted as one of the causes of acute gastroenteritis worldwide, little is known about the genetic characteristics of the whole genome of sapoviruses in China, especially those that infect humans. Here we report the complete genome sequence of a sapovirus strain, Human/Zhej...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1343-9

    authors: Zhou X,Sun Y,Shang X,Gao J,Zhao X,Shuai H,Zhang R,Zhang Y

    更新日期:2016-10-01 00:00:00

  • The ea22 gene of lambdoid phages: preserved prolysogenic function despite of high sequence diversity.

    abstract::The exo-xis region of lambdoid phages contains open reading frames and genes that appear to be evolutionarily important. However, this region has received little attention up to now. In this study, we provided evidence that ea22, the largest gene of this region, favors the lysogenic pathway over the lytic pathway in c...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-020-01734-8

    authors: Dydecka A,Bloch S,Necel A,Topka G,Węgrzyn A,Tong J,Donaldson LW,Węgrzyn G,Nejman-Faleńczyk B

    更新日期:2020-04-01 00:00:00

  • Emergence of rabbit haemorrhagic disease virus 2 in the archipelago of Madeira, Portugal (2016-2017).

    abstract::We report the detection of rabbit haemorrhagic disease virus 2 (RHDV2) in the Madeira archipelago, Portugal. Viral circulation was confirmed by RT-qPCR and vp60 sequencing. Epidemiological data revealed the outbreak initiated in October 2016 in Porto Santo affecting wild and domestic rabbits. It was then detected thre...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-017-1483-6

    authors: Carvalho CL,Silva S,Gouveia P,Costa M,Duarte EL,Henriques AM,Barros SS,Luís T,Ramos F,Fagulha T,Fevereiro M,Duarte MD

    更新日期:2017-12-01 00:00:00

  • Trends of subtype variation of human immunodeficiency virus type 1 in Zhejiang Province, China.

    abstract::The epidemic characteristics of human immunodeficiency virus type 1 (HIV-1) in Zhejiang Province have not been systematically identified. This study presented a dynamic analysis of HIV-1 subtype variation in Zhejiang from 2004 to 2008, based on the surveillance of molecular epidemiology or drug resistance. CRF01_AE wa...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1136-y

    authors: Yao Y,Xin R,Yang J,Xu Y,Zhang J,Xia Y,Pan X,Guo Z,Song Y

    更新日期:2015-02-01 00:00:00

  • Artesunate, an anti-malarial drug, has a potential to inhibit HCV replication.

    abstract::Hepatitis C virus (HCV) infection is a major global health issue. Although the search for HCV treatments has resulted in great achievements, the current treatment methods have limitations, and new methods and drugs for hepatitis C treatment are still required. The aim of the present study was to investigate the effect...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-015-1285-7

    authors: Dai R,Xiao X,Peng F,Li M,Gong G

    更新日期:2016-02-01 00:00:00

  • Human T-cell leukemia virus type 1 Tax induces an aberrant clustering of the tumor suppressor Scribble through the PDZ domain-binding motif dependent and independent interaction.

    abstract::Human T-cell leukemia virus type 1 (HTLV-1) is a causative agent of adult T-cell leukemia. HTLV-1 Tax1 transforming protein interacts with several PDZ domain-containing proteins, and the interaction is associated with the transforming activities of Tax1 as well as persistent HTLV-1 infection. In this study, we show th...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-008-0259-4

    authors: Okajima M,Takahashi M,Higuchi M,Ohsawa T,Yoshida S,Yoshida Y,Oie M,Tanaka Y,Gejyo F,Fujii M

    更新日期:2008-10-01 00:00:00

  • Characterisation of a satellite RNA of Cucumber mosaic virus that induces chlorosis in Capsicum annuum.

    abstract::The presence of Cucumber mosaic virus (CMV) satellite RNA dramatically changes symptoms on some hosts. A satellite RNA present in a strain of CMV (PepY-CMV) that induced chlorosis in pepper (Capsicum annuum) was shown to induce chlorosis in pepper in combination with another strain (Fny-CMV) that by itself induced a g...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-011-0608-6

    authors: Choi SK,Jeon YW,Yoon JY,Choi JK

    更新日期:2011-08-01 00:00:00

  • Characterization of white spot syndrome virus VP52B and its interaction with VP26.

    abstract::White spot syndrome virus (WSSV) is one of the major pathogens of cultured shrimp. Identification of envelope protein interactions has become a central issue for the understanding of WSSV assembly. In this paper, WSSV envelope protein VP52B was fused with GST-tag and expressed in Escherichia coli BL-21(DE3). Immunogol...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1126-0

    authors: Lin F,Jie Z,Hou L,Li F,Yang F

    更新日期:2015-02-01 00:00:00

  • Nine new RNA viruses associated with the fire ant Solenopsis invicta from its native range.

    abstract::The red imported fire ant (Solenopsis invicta) escaped its natural enemies when it was introduced into North America in the 1930s from South America. US efforts have focused on discovery of natural enemies, like viruses, to provide sustainable control of the ant. Nine new virus genomes were sequenced from the invasive...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-019-01652-4

    authors: Valles SM,Rivers AR

    更新日期:2019-06-01 00:00:00

  • Functional analysis of human spuma retrovirus genome.

    abstract::Human spuma retrovirus (HSRV) belongs to retroviruses that possess a complex genome organization. HSRV carries at least three extra genes in the region between env and the 3' long terminal repeat, which are not found in simple retroviruses. Via alternative splicing, these HSRV genes can encode several proteins. To gen...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF01701657

    authors: Adachi A,Sakai H,Tokunaga K,Kawamura M

    更新日期:1995-01-01 00:00:00

  • BK virus DNA cloned directly from human urine confirms an archetypal structure for the transcriptional control region.

    abstract::A BK virus isolate cloned from the urine of an immunosuppressed patient was identified as the WW strain. Fine mapping using four base-pair restriction enzymes identified a number of small deletions and insertions relative to prototype BK. The finding of a transcriptional control region with a structure similar to that...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00315259

    authors: Rubinstein R,Harley EH

    更新日期:1989-03-01 00:00:00

  • Glycoprotein K of herpes simplex virus: a transmembrane protein encoded by the UL53 gene which regulates membrane fusion.

    abstract::Glycoprotein K (gK) encoded by the UL53 gene is the ninth out of eleven HSV glycoproteins (gps). The precursor gK (pgK) is a transmembrane protein with four hydrophobic domains, which consists of 338 amino acids. The UL53 gene has two initiation codons: the upper overlaps with the UL52 ORF, while the lower is located ...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1023/a:1008025520655

    authors: Rajcáni J,Kúdelová M

    更新日期:1999-01-01 00:00:00

  • Expression of the X protein of hepatitis B virus in insect cells using recombinant baculoviruses.

    abstract::The baculovirus system was used to express the X protein of human hepatitis B virus (HBV). The X open reading frames (X ORFs) from cloned viral DNA of the HBV subtypes ayw and adr were introduced into the genome of Autographa californica nuclear polyhedrosis virus (AcNPV). The HBV-DNA of subtype adr derived from a hep...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00571930

    authors: Klein R,Schröder CH,Zentgraf H

    更新日期:1991-04-01 00:00:00

  • Comparison of Schmallenberg virus sequences isolated from mammal host and arthropod vector.

    abstract::Schmallenberg virus (SBV) is the member of Peribunyaviridae family, which comprises pathogens of importance for human and veterinary medicine. The virus is transmitted only between animals and mainly by biting midges of the genus Culicoides. This study was performed in order to determine SBV genetic diversity and eluc...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1607-7

    authors: Kęsik-Maliszewska J,Antos A,Rola J,Larska M

    更新日期:2018-12-01 00:00:00

  • Endogenous retroviruses in the human genome--a point of view.

    abstract::The search for retroviruses in human cancer cells has advanced with the discoveries of the retroviral reverse transcriptase, DNA hybridization and sequencing techniques, and polymerase chain reaction (PCR) technology. Each technological advancement has led to a better refinement and a better understanding of latent en...

    journal_title:Virus genes

    pub_type: 历史文章,杂志文章

    doi:10.1007/BF01702877

    authors: Becker Y

    更新日期:1995-02-01 00:00:00

  • A novel explanation for the existence of open reading frames on latency-associated transcripts of alphaherpesviruses.

    abstract::Recent studies indicate that alphaherpesviruses express latency associated transcripts (LATs) from the antisense strand of immediate early (IE) genes of the viral genome. It has been discussed that LATs containing extended open reading frames (ORFs) might be translated into protein products. We found that a salient fe...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF01703434

    authors: Boldogköi Z,Murvai J

    更新日期:1994-09-01 00:00:00