Abstract:
:Schmallenberg virus (SBV) is the member of Peribunyaviridae family, which comprises pathogens of importance for human and veterinary medicine. The virus is transmitted only between animals and mainly by biting midges of the genus Culicoides. This study was performed in order to determine SBV genetic diversity and elucidate the host-vector adaptation. All three viral segments were analysed for sequence variability and phylogenetic relations. The Polish SBV strains obtained from acute infections of cattle, congenital cases in sheep, and from Culicoides midges were sequenced using Sanger and next-generation sequencing (NGS) methods. The obtained sequences were genetically similar (99.2-100% identity) to the first-detected strain BH80/11-4 from German cattle. The sampling year and origin of Polish sequences had no effect on molecular diversity of SBV. Considering all analysed Polish as well as European sequences, ovine-derived sequences were the most variable, while the midge ones were more conserved and encompassed unique substitutions located mainly in nonstructural protein S. SBV sequences isolated from Culicoides are the first submitted to GenBank and reported.
journal_name
Virus Genesjournal_title
Virus genesauthors
Kęsik-Maliszewska J,Antos A,Rola J,Larska Mdoi
10.1007/s11262-018-1607-7subject
Has Abstractpub_date
2018-12-01 00:00:00pages
792-803issue
6eissn
0920-8569issn
1572-994Xpii
10.1007/s11262-018-1607-7journal_volume
54pub_type
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