Porcine reproductive and respiratory syndrome virus: phylogenetic analysis of circulating strains in the Republic of Ireland from 2016 to 2017.

Abstract:

:In order to investigate the genetic diversity of porcine reproductive and respiratory syndrome virus (PRRSV) strains currently circulating in the Republic of Ireland (ROI), the ORF5 gene from 17 field strains originating from four vaccinating commercial herds was sequenced and phylogenetically analysed. High genetic variability was observed between farms at the nucleotide (86.3-95.2%) and amino acid (85.5-96%) levels. Phylogenetic analysis confirmed that all field strains belonged to the European species (type 1) and clustered into three separate groups within the subtype 1 subgroup. This variation may pose challenges for diagnosis and prophylactic control of PRRSV through vaccination in the ROI.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Fitzgerald RM,Collins PJ,McMenamey MJ,Leonard FC,McGlynn H,O'Shea H

doi

10.1007/s00705-020-04710-7

subject

Has Abstract

pub_date

2020-09-01 00:00:00

pages

2057-2063

issue

9

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-020-04710-7

journal_volume

165

pub_type

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