Phylogenetic and recombination analysis of rice black-streaked dwarf virus segment 9 in China.

Abstract:

:Rice black-streaked dwarf virus (RBSDV) is an economically important virus that causes maize rough dwarf disease and rice black-streaked dwarf disease in East Asia. To study RBSDV variation and recombination, we examined the segment 9 (S9) sequences of 49 RBSDV isolates from maize and rice in China. Three S9 recombinants were detected in Baoding, Jinan, and Jining, China. Phylogenetic analysis showed that Chinese RBSDV isolates could be classified into two groups based on their S9 sequences, regardless of host or geographical origin. Further analysis suggested that S9 has undergone negative and purifying selection.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Zhou Y,Weng JF,Chen YP,Liu CL,Han XH,Hao ZF,Li MS,Yong HJ,Zhang DG,Zhang SH,Li XH

doi

10.1007/s00705-014-2291-0

subject

Has Abstract

pub_date

2015-04-01 00:00:00

pages

1119-23

issue

4

eissn

0304-8608

issn

1432-8798

journal_volume

160

pub_type

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