A Hierarchical Regulatory Landscape during the Multiple Stages of EMT.

Abstract:

:Epithelial-mesenchymal transition (EMT) enables cells to gain migratory and invasive features underlined by major transcriptional and epigenetic reprogramming. However, most studies have focused on the endpoints of the EMT process, and the epistatic hierarchy of the transcriptional networks underlying EMT has remained elusive. We have used a siRNA-based, functional high-content microscopy screen to identify 46 (co)transcription factors ((co)TFs) and 13 miRNAs critically required for EMT in normal murine mammary gland (NMuMG) cells. We compared dynamic gene expression during EMT kinetics and used functional perturbation of critical (co)TFs and miRNAs to identify groups and networks of EMT genes. Computational analysis as well as functional validation experiments revealed interaction networks between TFs and miRNAs and delineated the hierarchical and functional interactions of multiple EMT regulatory networks in NMuMG cells.

journal_name

Dev Cell

journal_title

Developmental cell

authors

Meyer-Schaller N,Cardner M,Diepenbruck M,Saxena M,Tiede S,Lüönd F,Ivanek R,Beerenwinkel N,Christofori G

doi

10.1016/j.devcel.2018.12.023

subject

Has Abstract

pub_date

2019-02-25 00:00:00

pages

539-553.e6

issue

4

eissn

1534-5807

issn

1878-1551

pii

S1534-5807(18)31123-7

journal_volume

48

pub_type

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