Plate in situ hybridization (PISH) as a time and cost effective RNA expression assay to study phenotypic heterogeneity in a population of cultured murine cells at single cell resolution.

Abstract:

OBJECTIVES:Regenerative medicine approaches using reprogrammed or transdifferentiated cells require efficient single cell expression profiling to analyze culture homogeneity for quality control and recipients' safety. RESULTS:While antigen-antibody based systems have been developed for several proteins, probing at the mRNA level allows for more flexibility, faster adaption to the ever increasing new data from next generation sequencing and increased specificity, especially for genes of conserved gene families. CONCLUSIONS:We developed a time and cost effective expression profiling assay for monolayer cell culture in 96-well plates based on RNA in situ hybridization, termed PISH, at single cell resolution.

journal_name

Biotechnol Lett

journal_title

Biotechnology letters

authors

Kraus P,Kocsis V,Williams C,Youngs B,Lufkin T

doi

10.1007/s10529-015-1833-1

subject

Has Abstract

pub_date

2015-08-01 00:00:00

pages

1573-7

issue

8

eissn

0141-5492

issn

1573-6776

journal_volume

37

pub_type

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