Biological and molecular characterization of Capsicum chlorosis virus infecting chilli and tomato in India.

Abstract:

:Two isolates of Capsicum chlorosis virus (CaCV, genus Tospovirus) from tomato (CaCV-To-Ind) and chilli (CaCV-Ch-Pan), collected from Haryana and Uttar Pradesh states of northern India respectively, were compared. A comparison of the amino acid sequences of their N genes revealed more than 96% identity, confirming that the virus isolates in India have a high degree of sequence conservation and are closely related to Australian isolates. Analysis of the host range of CaCV revealed no biological difference between the isolates, but they differed from CaCV-Australia. The nucleotide sequences of S, M and L RNA of CaCV-Ch-Pan were determined. The S RNA contains 3,105 nucleotides (nt), with NSs and N genes of 1,320 and 828 nt, respectively. The M RNA consists of 4,821 nt, with an NSm gene of 927 nt and a Gn/Gc gene of 3,366 nt. The intergenic regions of S and M RNA contain 824 and 425 nt, respectively. The L RNA consists of 8,912 nt, with an RNA-dependent RNA polymerase gene of 8,634 nt.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Kunkalikar SR,Sudarsana P,Rajagopalan P,Zehr UB,Ravi KS

doi

10.1007/s00705-010-0681-5

subject

Has Abstract

pub_date

2010-07-01 00:00:00

pages

1047-57

issue

7

eissn

0304-8608

issn

1432-8798

journal_volume

155

pub_type

杂志文章
  • A vhs-like activity of bovine herpesvirus-1.

    abstract::Bovine herpesvirus 1 (BHV-1) is a major pathogen of cattle, causing significant disease including immunosuppression in infected animals. In vitro, the surface expression of major histocompatibility complex (MHC) class I molecules, crucial for an appropriate anti-viral immune response of the host, is down-regulated by ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050070038

    authors: Hinkley S,Ambagala AP,Jones CJ,Srikumaran S

    更新日期:2000-01-01 00:00:00

  • c-Jun integrates signals from both MEK/ERK and MKK/JNK pathways upon vaccinia virus infection.

    abstract::Usurpation of the host's signalling pathways is a common strategy employed by viruses to promote their successful replication. Here we show that infection with the orthopoxvirus vaccinia virus (VACV) leads to sustained stimulation of c-Jun activity during the entire infective cycle. This stimulation is temporally regu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3446-6

    authors: Leite FGG,Torres AA,De Oliveira LC,Da Cruz AFP,Soares-Martins JAP,Pereira ACTC,Trindade GS,Abrahão JS,Kroon EG,Ferreira PCP,Bonjardim CA

    更新日期:2017-10-01 00:00:00

  • Direct evidence for genome segment reassortment between concurrently-circulating human rotavirus strains.

    abstract::Extensive heterogeneity in electropherotypes observed among group A human rotaviruses has been considered as a result of two major mechanisms; i.e., the accumulation of point mutations and genetic reassortment between concurrently-circulating strains. However, no evidence was reported thus far indicating that any one ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050170162

    authors: Watanabe M,Nakagomi T,Koshimura Y,Nakagomi O

    更新日期:2001-01-01 00:00:00

  • Diagnostic potential of monoclonal antibodies against the capsid protein of chikungunya virus for detection of recent infection.

    abstract::Chikungunya fever is self-limiting. However, neurological and hemorrhagic complications have been seen in recent outbreaks. The clinical manifestations of this disease are similar to those of dengue virus infection, indicating the need for differential diagnosis in areas such as India, which are endemic for both virus...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-2829-4

    authors: Damle RG,Jayaram N,Kulkarni SM,Nigade K,Khutwad K,Gosavi S,Parashar D

    更新日期:2016-06-01 00:00:00

  • Resolution of block neutralization test curves into components of the foot-and-mouth disease virus system.

    abstract::Classic neutralization studies by Fazekas de St. Groth and Webster (8) on mixtures of influenza viruses and mixtures of rabbit antisera are reinterpreted in terms of a percentage contaminant in the stock used for the dilution series. A very small amount of a different virus changes the shape of quantal assay curves co...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01317497

    authors: Trautman R

    更新日期:1979-01-01 00:00:00

  • Induction of apoptosis by iridovirus virion protein extract.

    abstract::Chilo iridescent virus (CIV; IIV-6) is the type member of the genus Iridovirus (family Iridoviridae, large icosahedral cytoplasmic DNA viruses). CIV induces death and deformity in the cotton boll weevil, Anthonomus grandis, replicates productively in larvae of the cotton boll weevil, and significantly reduces laborato...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-0945-x

    authors: Paul ER,Chitnis NS,Henderson CW,Kaul RJ,D'Costa SM,Bilimoria SL

    更新日期:2007-01-01 00:00:00

  • High frequency of BF mosaic genomes among HIV-1-infected children from Sao Paulo, Brazil.

    abstract::HIV-1 genetic diversity information from a pediatric population is scarce. This study enrolled 128 children living with HIV/AIDS, 103 antiretroviral-treated and 25 naive, from the Sao Paulo metropolitan area. Gag, pol and env regions were amplified, and drug resistance mutations, V3 loop, tropism and viral clades were...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-008-0178-7

    authors: de Oliveira CM,Almeida FJ,Rodrigues R,Crozatti M,Vazquez CM,do Socorro Carneiro Ferrão M,Campeas AE,Marques SR,Berezin EN,de Macedo Brígido LF

    更新日期:2008-01-01 00:00:00

  • T-even-related bacteriophages as candidates for treatment of Escherichia coli urinary tract infections.

    abstract::Multidrug-resistant uropathogenic Escherichia coli (UPEC) is increasing gradually on a worldwide scale. We therefore examined the possibility of bacteriophage (phage) therapy for urinary tract infections (UTIs) caused by the UPEC strains as an alternative to chemotherapy. In addition to the well-known T4 phage, KEP10,...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-0031-4

    authors: Nishikawa H,Yasuda M,Uchiyama J,Rashel M,Maeda Y,Takemura I,Sugihara S,Ujihara T,Shimizu Y,Shuin T,Matsuzaki S

    更新日期:2008-01-01 00:00:00

  • Inhibition of betanodavirus infection by inhibitors of endosomal acidification.

    abstract::Betanodaviruses, members of the family Nodaviridae, have small positive-stranded bipartite RNA genomes and are the causal agent of viral nervous necrosis (VNN) in many species of marine farmed fish. In the aquaculture industry, outbreaks of betanodavirus infection and spread in larval and juvenile fish result in devas...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-1061-7

    authors: Adachi K,Ichinose T,Takizawa N,Watanabe K,Kitazato K,Kobayashi N

    更新日期:2007-01-01 00:00:00

  • [Local immune response in mouse experimental airborne influenza: immunoglobulin concentrations, antibody levels of immunoglobulin classes and anamnestic response in bronchial washings (author's transl)].

    abstract::Sera and bronchial washings from normal mice and from mice previously infected with influenza virus were analyzed for their concentration of four immunoglobulin (Ig) classes by the method of single radial immunodiffusion and for their content of specific antibody of these Ig classes by the immunofluorescent method. Ig...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01314846

    authors: Lemercier G,Neveu D,Morel J,Fontanges R

    更新日期:1977-01-01 00:00:00

  • Variations in the core region of hepatitis C virus genomes in patients with chronic hepatitis.

    abstract::In each infected patient, the population of hepatitis C virus is composed of quasispecies that differ in their nucleotide sequences. Among regions in hepatitis C virus genomes, nucleotide sequences of the hypervariable region have been shown to change quickly during the course of infection. It is not known, however, w...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01315417

    authors: Kurosaki M,Enomoto N,Marumo F,Sato C

    更新日期:1995-01-01 00:00:00

  • Next-generation sequencing of a human-animal reassortant G6P[14] rotavirus A strain from a child hospitalized with diarrhoea.

    abstract::We previously reported the VP4 and the VP7 genotypes of the first G6P[14] rotavirus strain (RVA/Human-wt/GHA/M0084/2010/G6P[14]) from the stool of an infant with diarrhoea in Ghana. In the current study, we obtained the complete genome sequences using Illumina MiSeq next-generation sequencing to enable us to determine...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-020-04543-4

    authors: Damanka SA,Dennis FE,Lartey BL,Nyarko KM,Agbemabiese CA,Armah GE

    更新日期:2020-04-01 00:00:00

  • Location and architecture of an antibody-binding site of influenza A virus nucleoprotein.

    abstract::Amino acid positions recognized by monoclonal antibodies (MAbs) in the influenza A virus nucleoprotein (NP) have been reported. As these residues were scattered in the three-dimensional (3D) structure of NP, no patterns of the architecture of antibody-binding sites could be inferred. Here, we used site-specific mutage...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1952-8

    authors: Varich NL,Sadykova GK,Prilipov AG,Kochergin-Nikitsky KS,Webster RG,Kaverin NV

    更新日期:2014-06-01 00:00:00

  • Characterization of viral DNAs from cells infected with chicken anaemia agent: sequence analysis of the cloned replicative form and transfection capabilities of cloned genome fragments.

    abstract::The viral DNAs induced by the unclassified animal virus, chicken anaemia agent (CAA), during replication in MDCC-MSB 1 cells have been investigated. Analyses after S1 nuclease, restriction endonuclease and denaturation treatments indicated that infected cell extracts contained genome-size, single-stranded DNA (M(r) 2....

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01309811

    authors: Meehan BM,Todd D,Creelan JL,Earle JA,Hoey EM,McNulty MS

    更新日期:1992-01-01 00:00:00

  • Analysis of fitness differences of hepatitis B virus genotypes D and F using a cotransfection assay.

    abstract::Hepatitis B virus (HBV) circulates as a collection of genetically related variants that evolve throughout the chronic infection. Those viral variants that have the greatest fitness are fixed. We recently showed different fitness for HBV variants involved in two epidemiological situations. To understand these fitness d...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-018-4090-5

    authors: Sevic I,Elizalde MM,González López Ledesma MM,Flichman DM,Campos RH

    更新日期:2019-02-01 00:00:00

  • Genetic variability of the coat protein sequence of pea seed-borne mosaic virus isolates and the current relationship between phylogenetic placement and resistance groups.

    abstract::Nucleotide sequences of complete or partial coat protein (CP) genes were determined for 11 isolates of pea seed-borne mosaic virus (PSbMV) from Australia and one from China, and compared with known sequences of 20 other isolates. On phylogenetic analysis, the isolates from Australia and China grouped into 2 of 3 clade...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-011-1002-3

    authors: Wylie SJ,Coutts BA,Jones RA

    更新日期:2011-07-01 00:00:00

  • Clinical and subclinical bovine leukemia virus infection in a dairy cattle herd in Zambia.

    abstract::Bovine leukemia virus (BLV) causes enzootic bovine leucosis (EBL) and is responsible for substantial economic losses in cattle globally. However, information in Africa on the disease is limited. Here, based on clinical, hematological, pathological and molecular analyses, two clinical cases of EBL were confirmed in a d...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3205-0

    authors: Pandey GS,Simulundu E,Mwiinga D,Samui KL,Mweene AS,Kajihara M,Mangani A,Mwenda R,Ndebe J,Konnai S,Takada A

    更新日期:2017-04-01 00:00:00

  • The complete genome sequence of an enterovirus 76 isolate in China reveals a recombination event.

    abstract::Enterovirus 76 (EV76) is a new member of species Human Enterovirus A (HEV-A). So far, the only complete genome sequence of the prototype strain from France has been available. In this study, we determined the complete nucleotide sequence of strain 04360, isolated from an acute flaccid paralysis patient in Shandong pro...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-011-1067-z

    authors: Xu A,Tao Z,Lin X,Liu Y,Zhang Y,Song L,Wang H,Yang J,Li Y,Ji F,Feng L,Zhao Z

    更新日期:2011-09-01 00:00:00

  • In vitro antiviral activity of lactoferrin and ribavirin upon hantavirus.

    abstract::Bovine lactoferrin (LF) and ribavirin (Rbv) were tested as antiviral agents against Seoul type hantavirus (SR-11 strain) in vitro. Hantaviral foci number in Vero E6 cells infected with SR-11 was reduced with LF treatment by 5 days post infection to obtain a 50% effective dose (ED50) of 2500 microg/ml, while pretreatme...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050070077

    authors: Murphy ME,Kariwa H,Mizutani T,Yoshimatsu K,Arikawa J,Takashima I

    更新日期:2000-01-01 00:00:00

  • Characterisation of Banana streak Mysore virus and evidence that its DNA is integrated in the B genome of cultivated Musa.

    abstract::We have sequenced the complete genome of an isolate of Banana streak virus from banana cv. 'Mysore' and show that it is sufficiently different from a previously characterised isolate from cv. 'Obino l'Ewai' to warrant recognition as a distinct species, for which the name Banana streak Mysore virus (BSMysV) is proposed...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-004-0471-z

    authors: Geering AD,Pooggin MM,Olszewski NE,Lockhart BE,Thomas JE

    更新日期:2005-04-01 00:00:00

  • Isolation and studies of myxovirus glycoproteins.

    abstract::The isolation of ortho- and paramyxovirus glycoproteins using a new nonionic detergent (MESK) is reported. MESK was shown to solubilize most of the viral envelope glycoproteins without decreasing their biologic activity. Solubilized glycoproteins are not contaminated by any internal viral proteins or by appreciable qu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01314237

    authors: Berezin VA,Zaides VM,Artamonov AF,Isaeva ES,Zhdanov VM

    更新日期:1985-01-01 00:00:00

  • In vitro expression and analysis of secreted fowlpox virus CC chemokine-like proteins Fpv060, Fpv061, Fpv116 and Fpv121.

    abstract::The four CC chemokine-like proteins (Fpv060, Fpv061, Fpv116 and Fpv121) of fowlpox virus (FWPV) were over-expressed as His-tagged versions from a T7 promoter/EMCV IRES construct in vitro, by coupled transcription/translation, or in cell culture, by co-infection with two recombinant FWPVs (one expressing the chemokine-...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-005-0560-7

    authors: Jeshtadi A,Henriquet G,Laidlaw SM,Hot D,Zhang Y,Skinner MA

    更新日期:2005-09-01 00:00:00

  • Predominance of hepatitis B virus genotype C among Karens, the 'old settlers' of Andaman and Nicobar Islands, India.

    abstract::The Karens, or 'old settlers', migrated from Myanmar to Andaman and Nicobar islands 80 years ago. A high HBV exposure rate among them has been reported. A study of 34 HBsAg carriers was done to investigate the origin of HBV infection among the Karens. RFLP-based genotyping was confirmed by sequencing and phylogenetic ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-006-0910-0

    authors: Datta S,Chandra PK,Banerjee A,Chakravarty R,Murhekar KM,Murhekar MV

    更新日期:2007-01-01 00:00:00

  • Genome polymorphism of human adenoviruses of subgenus C.

    abstract::The genome of adenovirus (AV) types 1, 2, and 5 is known to be very variable as evidenced by the great number of genome types described (36, 61, and 35 for AV1, 2, and 5 respectively). Physical maps were constructed for nearly all of the restriction or R-variants by biochemical methods and by adapting restriction frag...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01718606

    authors: Adrian T

    更新日期:1996-01-01 00:00:00

  • Efficacy of quantitative RT-PCR for detection of the nucleoprotein gene from different porcine rubulavirus strains.

    abstract::Blue-eye disease is an emergent viral swine infection caused by porcine rubulavirus (PoRV). We have developed a qRT-PCR method to detect and quantify expression of the nucleoprotein gene for different PoRV strains. The limit of detection for this assay was 10(2) copies of synthetic RNA. Viral RNA from PoRV was detecta...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1672-0

    authors: Rivera-Benitez JF,García-Contreras Adel C,Reyes-Leyva J,Hernández J,Sánchez-Betancourt JI,Ramírez-Mendoza H

    更新日期:2013-09-01 00:00:00

  • Viral meningitis: an overview.

    abstract::Meningitis is a serious condition that affects the central nervous system. It is an inflammation of the meninges, which is the membrane that surrounds both the brain and the spinal cord. Meningitis can be caused by bacterial, viral, or fungal infections. Many viruses, such as enteroviruses, herpesviruses, and influenz...

    journal_title:Archives of virology

    pub_type: 杂志文章,评审

    doi:10.1007/s00705-020-04891-1

    authors: Kohil A,Jemmieh S,Smatti MK,Yassine HM

    更新日期:2021-01-03 00:00:00

  • Comparative sequence analysis of open reading frames 2 to 7 of the modified live vaccine virus and other North American isolates of the porcine reproductive and respiratory syndrome virus.

    abstract::To elucidate changes associated with the attenuated virulence in a modified live porcine reproductive and respiratory syndrome (PRRS) vaccine (Boehringer Ingelheim Animal Health, St. Joseph, MO), derived from an American prototype ATCC virus VR-2332, nucleotide sequence of 3' genome covering open reading frames (ORFs)...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050050316

    authors: Yang SX,Kwang J,Laegreid W

    更新日期:1998-01-01 00:00:00

  • Isolation of two new serotypes of porcine rotavirus from pigs with diarrhea.

    abstract::Two group A rotaviruses (ISU-64 and ISU-65) with subgroup I antigen were isolated from pigs with diarrhea and were shown by two-way neutralization tests to be two new serotypes of porcine rotavirus. ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310917

    authors: Paul PS,Lyoo YS,Andrews JJ,Hill HT

    更新日期:1988-01-01 00:00:00

  • Rabovirus: a proposed new picornavirus genus that is phylogenetically basal to enteroviruses and sapeloviruses.

    abstract::We have sequenced the genome of a novel picornavirus, rabovirus A (rat-borne virus, RaBoV-A, NC_026314), which was present in the feces of a Norway rat (Rattus norvegicus) from Berlin, Germany. This virus is related to members of the genera Enterovirus and Sapelovirus. RaboV-A contains a type II IRES that is unlike th...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-015-2523-y

    authors: Ng TF,Sachsenröder J,Reuter G,Knowles NJ,Delwart E,Johne R

    更新日期:2015-10-01 00:00:00

  • Role of Langerhans cells in the infection of the guinea-pig epidermis with foot-and-mouth disease virus.

    abstract::In guinea-pig infected with foot-and-mouth disease virus (FMDV), Langerhans cells in the foot pads increase in number and show viral antigens 24 hours post-inoculation, preceding appearance of virus in epithelial cells and vesiculation. This observation suggests that Langerhans cells may be engaged in virus transport ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01309929

    authors: di Girolamo W,Salas M,Laguens RP

    更新日期:1985-01-01 00:00:00