Abstract:
:We previously reported the VP4 and the VP7 genotypes of the first G6P[14] rotavirus strain (RVA/Human-wt/GHA/M0084/2010/G6P[14]) from the stool of an infant with diarrhoea in Ghana. In the current study, we obtained the complete genome sequences using Illumina MiSeq next-generation sequencing to enable us to determine the host species origin of the genes by phylogenetic analysis. The genotype constellation was G6-P[14]-I2-R2-C2-M2-A11-N2-T6-E2-H3. Phylogenetic analysis showed that M0084 was a reassortant strain from RVAs of both artiodactyl and human host species origin. The level of sequence identity of the individual genes of M0084 to other sequences in the GenBank ranged from 95.2 to 99.5%; however, there was no single strain from the GenBank database with a complete genome sequence that was highly similar to that of M0084. To help trace the source of such unique gene pools being introduced into human RVAs, it will be useful to examine RVA sequences from potential reservoirs such as sheep and goats, which are common domestic animals in this locality.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Damanka SA,Dennis FE,Lartey BL,Nyarko KM,Agbemabiese CA,Armah GEdoi
10.1007/s00705-020-04543-4subject
Has Abstractpub_date
2020-04-01 00:00:00pages
1003-1005issue
4eissn
0304-8608issn
1432-8798pii
10.1007/s00705-020-04543-4journal_volume
165pub_type
杂志文章abstract::Noninfectious virus particles were produced in Ehrlich ascites tumor cells infected intraperitoneally with fowl plague virus. The PFU yield of virus per cell was less than 0.1 and the ratio PFU/HA units in the progeny virus was less than 10(3). The virus particles had the same morphology and size as egg-grown virus bu...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01315278
更新日期:1978-01-01 00:00:00
abstract::A novel potyvirus was discovered in Angelica lucida L. (wild celery) and A. genuflexa Nutt. (kneeling Angelica) (family Apiaceae) in the Matanuska- Susitna Valley, Alaska. The experimental plant host range of the virus included species in three families: Chenopodiaceae (Chenopodium amaranticolor Coste et Reyn and Chen...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-007-1003-4
更新日期:2007-01-01 00:00:00
abstract::At present, there are no effective antiviral treatments available for contagious ecthyma, and rapid diagnosis is therefore critical for effective control of the disease. Recently, the invention of a novel LAMP technique that can rapidly amplify nucleic acids with high specificity and sensitivity under isothermal condi...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1526-1
更新日期:2013-04-01 00:00:00
abstract::Replication of herpes simplex virus type 1 (HSV-1) in the adrenal gland of mice was observed 12 h after intravenous inoculation, peaked at 48 h (7 x 10(7) PFU/tissue), and was maintained until death. Virus spread to the bilateral intermediolateral column of the thoracic spinal cord. Infected cells appeared in the fasc...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050170048
更新日期:2001-10-01 00:00:00
abstract::Rice black-streaked dwarf virus (RBSDV) is an economically important virus that causes maize rough dwarf disease and rice black-streaked dwarf disease in East Asia. To study RBSDV variation and recombination, we examined the segment 9 (S9) sequences of 49 RBSDV isolates from maize and rice in China. Three S9 recombina...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-014-2291-0
更新日期:2015-04-01 00:00:00
abstract::Human polymorphonuclear leukocytes (PMNL) incubated with influenza virus, A/USSR/90/77 (H1N1) or its hemagglutinin produced a significant increase in their PKC activity when compared with untreated PMNL. The activated kinase translocated from cytosol to cellular membrane. The calcium-dependent enzyme activity was inhi...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050439
更新日期:1998-01-01 00:00:00
abstract::The influence of hepatitis B virus (HBV) gene heterogeneity on the failure of HBV vaccination in eastern China remains unknown. Here, we assigned 78 hepatitis B surface antigen (HBsAg)-carrier mothers to two groups: 41 mothers from whom transmission of HBV to their children was successfully prevented and 37 mothers wh...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-009-0315-y
更新日期:2009-01-01 00:00:00
abstract::Transmission electron microscopy was used to confirm the presence of picorna-like virus particles presumed to be Homalodisca coagulata virus-1 (HoCV-1) in the midgut region of adult glassy-winged sharpshooters (GWSS). In addition, we offer a reverse transcription polymerase chain reaction (RT-PCR) assay for the detect...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-007-1066-2
更新日期:2008-01-01 00:00:00
abstract::It has been suggested that antibody overproduction plays a role in the pathogenesis of feline infectious peritonitis (FIP). However, only a few studies on the B-cell activation mechanism after FIP virus (FIPV) infection have been reported. The present study shows that: (1) the ratio of peripheral blood sIg(+) CD21(-) ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-008-0265-9
更新日期:2009-01-01 00:00:00
abstract::The complement fixing antigens of rubella virus have been found to contain virion envelope but little nucleocapsid polypeptides. They are also shown to be associated with two additional polypeptides of host origin. Evidence is presented to suggest that the complement fixing antigens are structural components of the pl...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01315301
更新日期:1986-01-01 00:00:00
abstract::Strawberry crinkle disease is one of the major diseases that threatens strawberry production. Although the biological properties of the agent, strawberry crinkle virus (SCV), have been thoroughly investigated, its complete genome sequence has never been published. Existing RT-PCR-based detection relies on a partial se...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-018-3860-4
更新日期:2018-09-01 00:00:00
abstract::We focused on the role of membrane bound sugar residues in the infection of fibroblasts and monocyte-like cells with human cytomegalovirus (HCMV). Treatment of phorbol 12-myristate 13-acetate (PMA) differentiated monocyte-like cells THP-1 or human fibroblasts MRC-5 with lectins specific for N-acetylneuraminic acid (Ne...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01322663
更新日期:1995-01-01 00:00:00
abstract::RNA2, the short segment of the genome of Dicenthrarchus labrax encephalitis virus (DIEV), a fish nodavirus causing seabass encephalitis, was cloned. Sequence analysis revealed that DIEV RNA2 contains a single open reading frame (ORF), which carries the catalytic D-75 residue but lacks the site for autocatalytic proteo...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050248
更新日期:1997-01-01 00:00:00
abstract::In the Mt. Kosciusko alpine area of Australia there are three well-separated populations of Cardamine lilacina, an endemic sward-forming perennial brassica, and these are infected with turnip yellow mosaic tymovirus. The genetic variation in these viral populations has been assessed by an RNA hybrid mismatch polymorph...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01309845
更新日期:1993-01-01 00:00:00
abstract::Two subgroup-specific monoclonal antibodies (MAb) raised in mice against group A human rotavirus were shown to react by immunoblotting with the trimeric form of VP6 of the homologous subgroup and successfully applied to development of new single-sandwich ELISA systems for rapid subgrouping of human strains. All of the...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01317927
更新日期:1989-01-01 00:00:00
abstract::AcDNA library was generated from purified RNA of sugarcane streak mosaic virus--Andhra Pradesh (SCSMV-AP). Two overlapping clones covering 3160 nucleotides encoding partial CI, complete 6K2, VPg-NIa and NIb genes were sequenced. A comparison of this sequence along with the 3' terminal 1315 nucleotides of SCSMV-AP dete...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-002-0851-1
更新日期:2002-10-01 00:00:00
abstract::Two day-old athymic (rnu/rnu) and euthymic (rnu/+) rat pups nursing immune or non-immune dams were inoculated oronasally with the Yale strain of rat virus (RV-Y). All athymic and euthymic pups (57/57) from immune dams remained clinically normal, whereas 51 of 66 athymic and euthymic pups from non-immune dams died with...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01311299
更新日期:1991-01-01 00:00:00
abstract::This article reports the changes to virus taxonomy approved and ratified by the International Committee on Taxonomy of Viruses (ICTV) in October 2018. Of note, the ICTV has approved, by an absolute majority, the creation of additional taxonomical ranks above those recognized previously. A total of 15 ranks (realm, sub...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-018-04136-2
更新日期:2019-03-01 00:00:00
abstract::The genome of a Spanish isolate of Broad bean wilt virus-1 (BBWV-1) was completely sequenced and compared with available sequences of other isolates of the genus Fabavirus (BBWV-1 and BBWV-2). This consisted of two RNAs of 5814 and 3431 nucleotides, respectively, and their organization was similar to that of other mem...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-005-0582-1
更新日期:2005-10-01 00:00:00
abstract::Monoclonal antibodies (MAbs) against a 39 kDa (sigma C) protein of the avian reovirus RAM-1 strain inhibited virus-induced fusion of cells and the protein was expressed on the surface of infected cells. The fusion-inhibiting activity of the three MAbs reacting with the sigma C protein suggest two putative epitopes wer...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050496
更新日期:1999-01-01 00:00:00
abstract::B-cell epitopes of varicella-zoster virus glycoprotein II were mapped by means of solid phase ELISA, synthetic oligopeptides (constructed according to the Davison-Scott sequencing of the varicella-zoster virus genome) and sera from varicellae and herpes zoster patients. The individual pattern of antibody peptide bindi...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01718644
更新日期:1996-01-01 00:00:00
abstract::A total of 72 Borna Disease virus infected rabbits were treated with different concentrations of cyclophosphamide, glucocorticoids or both in combination. Comparison with untreated, infected rabbits showed a drastic alteration in the clinical picture, a considerable prolongation of the survival time, and differences i...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01318132
更新日期:1981-01-01 00:00:00
abstract::The aim of this study was to develop and evaluate a two-tube multiplex real-time RT-PCR assay for the detection and identification of four viral hemorrhagic fever (VHF) pathogens, severe fever with thrombocytopenia syndrome virus (SFTSV), Hantaan virus (HTNV), Seoul virus (SEOV), and dengue virus (DENV), from human cl...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1677-8
更新日期:2013-09-01 00:00:00
abstract::Here, we report the molecular characterization of a novel partitivirus from Phomopsis vexans strain PvHZ002, a plant-pathogenic fungus infecting eggplant. The virus was designated "Phomopsis vexans partitivirus 1" (PvPV1). PvPV1 contains two dsRNA segments, dsRNA1 and dsRNA2, which are 1,662 bp and 1,628 bp long, resp...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04835-9
更新日期:2021-01-01 00:00:00
abstract::Beak and feather disease virus (BFDV) is an avian circovirus, and it has a single-stranded DNA genome. It causes a fatal disease in parrots called psittacine beak and feather disease (PBFD). After screening of samples collected from Taiwan using PCR, complete genome sequences of isolates from 21 samples from various s...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2963-z
更新日期:2016-11-01 00:00:00
abstract::In this study, an improved polymerase chain reaction (PCR) was used for detection of DNA of latent EHV-1 strains from several sources. Three pairs of oligonucleotide primers spanning fragments of 333 bp, 226 bp and 268 bp of the thymidine kinase (tk) gene, and one primer pair spanning 225 bp of the glycoprotein C (gC)...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050070055
更新日期:2000-01-01 00:00:00
abstract::Infectious laryngotracheitis (ILT), caused by infectious laryngotracheitis virus (ILTV), is an Office International des Epizooties (OIE) notifiable disease. However, we have not clearly understood the dynamic distribution, tissue tropism, pathogenesis, and replication of ILTV in chickens. In this report, we investigat...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1414-8
更新日期:2013-03-01 00:00:00
abstract::The numbers of the carbohydrate side chains have been analyzed on a series of subtype 7 hemagglutinins of influenza A virus. The procedure employed involves growth of the virus in the presence of the trimming inhibitor N-methyl-1-desoxynojirimycin followed by controlled removal of the resulting mannose-rich oligosacch...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01314433
更新日期:1987-01-01 00:00:00
abstract::In this study, bovine enteric caliciviruses (BECs) were detected in 49.4% of a total of 253 stool specimens for diarrheic calves collected from 42 industrial dairy farms from March 2010 to February 2012. Genogroup III norovirus (NoVsGIII) were more prevalent (39.5%) than neboviruses (NBs) (15%), and coinfections were ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-018-3716-y
更新日期:2018-05-01 00:00:00
abstract::Chikungunya fever is self-limiting. However, neurological and hemorrhagic complications have been seen in recent outbreaks. The clinical manifestations of this disease are similar to those of dengue virus infection, indicating the need for differential diagnosis in areas such as India, which are endemic for both virus...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2829-4
更新日期:2016-06-01 00:00:00