Efficacy of quantitative RT-PCR for detection of the nucleoprotein gene from different porcine rubulavirus strains.

Abstract:

:Blue-eye disease is an emergent viral swine infection caused by porcine rubulavirus (PoRV). We have developed a qRT-PCR method to detect and quantify expression of the nucleoprotein gene for different PoRV strains. The limit of detection for this assay was 10(2) copies of synthetic RNA. Viral RNA from PoRV was detectable at a TCID50 of 0.01. Significant differences were observed between viral RNA quantification and virus titration results for nine PoRV strains. For nasal and oral swab samples that were collected from experimentally infected pigs, the qRT-PCR assay was more sensitive (87.1-83.9 %) for the detection of positive samples than methods involving isolation of virus. The implementation of highly sensitive assays that yield results quickly will be of great assistance in the eradication of PoRV from Mexico. We also believe that the newly developed qRT-PCR assay will help reduce the spread of this viral infection to other countries.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Rivera-Benitez JF,García-Contreras Adel C,Reyes-Leyva J,Hernández J,Sánchez-Betancourt JI,Ramírez-Mendoza H

doi

10.1007/s00705-013-1672-0

subject

Has Abstract

pub_date

2013-09-01 00:00:00

pages

1849-56

issue

9

eissn

0304-8608

issn

1432-8798

journal_volume

158

pub_type

杂志文章
  • Hepatitis E virus serology and PCR: does the methodology matter?

    abstract::Hepatitis E virus (HEV) genotype 3 is an emerging pathogen in the developed world. As the clinical manifestations and routine laboratory parameters are often nonspecific, accurate diagnostic tests are crucial. In the current study, the performance of six serological assays and three PCR assays for the detection of HEV...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3395-0

    authors: Cattoir L,Van Hoecke F,Van Maerken T,Nys E,Ryckaert I,De Boulle M,Geerts A,Verhelst X,Colle I,Hutse V,Suin V,Wautier M,Van Gucht S,Van Vlierberghe H,Padalko E

    更新日期:2017-09-01 00:00:00

  • Stable polypeptides associated with the 250S mengovirus-induced RNA polymerase structure.

    abstract::One host polypeptide (40,000 daltons) synthesized prior to infection is associated with the 250S RNA polymerase structure partially purified by a combination of velocity sedimentation and isopycnic separation. A series of pulse-chase experiments have shown that a 56,000 dalton polypeptide made during the eclipse phase...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01317808

    authors: Loesch WT Jr,Arlinghaus A

    更新日期:1975-01-01 00:00:00

  • Enemies with benefits: mutualistic interactions of viruses with lower eukaryotes.

    abstract::Viruses represent some of the deadliest pathogens known to science. Recently they have been reported to have mutualistic interactions with their hosts, providing them direct or indirect benefits. The mutualism and symbiogenesis of such viruses with lower eukaryotic partners such as fungi, yeast, and insects have been ...

    journal_title:Archives of virology

    pub_type: 杂志文章,评审

    doi:10.1007/s00705-017-3686-5

    authors: Jagdale SS,Joshi RS

    更新日期:2018-04-01 00:00:00

  • Complete genome sequence of SRT8, a novel T1-like Escherichia coli bacteriophage.

    abstract::In this study, an Escherichia coli virulent phage, SRT8, was isolated from sewage sludge samples collected from Jinan, Shandong Province, China. The genome of phage SRT8 consists of 49,579 bp with 47.83% G+C content. The phage genome contains 84 putative protein-coding genes, and no rRNA or tRNA genes. Comparative gen...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-018-3778-x

    authors: Zhao K,Song S,Zhao Z,Gu P,Fan X,Li Q

    更新日期:2018-06-01 00:00:00

  • Regulation of the microRNA processor DGCR8 by hepatitis B virus proteins via the transcription factor YY1.

    abstract::MicroRNAs (miRNAs) are a new class of well-conserved small noncoding RNAs that mediate posttranscriptional gene regulation. Hepatitis B virus (HBV) causes various liver diseases, including chronic hepatitis, liver cirrhosis and hepatocellular cancer. Recent data have indicated HBV alters miRNAs expression patterns, bu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2286-x

    authors: Shan X,Ren M,Chen K,Huang A,Tang H

    更新日期:2015-03-01 00:00:00

  • Envelopment and the envelopes of infectious bovine rhinotracheitis virus in ultrathin sections.

    abstract::An electron microsopic study of cell cultures and bovine foetal tracheal organ cultures infected with infectious bovine rhinotracheitis (IBR) virus showed the following. a) The difference in the site at which the outer envelope is acquired in the infected cell is responsible for some morphological differences between ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01317842

    authors: Valícek L,Smíd B

    更新日期:1976-01-01 00:00:00

  • Surveillance and analysis of enteroviruses in water environments in Shenzhen from 2010 to 2011.

    abstract::To determine the prevalence of enteroviruses in aquatic environments in Shenzhen, water samples were collected monthly from April 2010 to December 2011. After concentration by the filter adsorption-beef extract elution method, the enteroviruses were propagated in RD cells. Thirty-five of 105 water samples (33.33 %) we...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1611-0

    authors: Chen H,Liu Q,Wang D,Chen Y,Feng B,Li G,Yao W,Shu B,He Y

    更新日期:2013-06-01 00:00:00

  • Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France.

    abstract::Nanoviruses are multi-component plant-infecting single-stranded DNA viruses. Using a viral metagenomics-informed approach, a new nanovirus and two associated alphasatellite molecules have been identified in an uncultivated asymptomatic Vicia cracca plant in the Rhône region of France. This novel nanovirus genome inclu...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3634-4

    authors: Gallet R,Kraberger S,Filloux D,Galzi S,Fontes H,Martin DP,Varsani A,Roumagnac P

    更新日期:2018-03-01 00:00:00

  • Point mutations in helper component protease of clover yellow vein virus are associated with the attenuation of RNA-silencing suppression activity and symptom expression in broad bean.

    abstract::Helper component protease (HC-Pro) is a potyvirus-encoded multifunctional protein and a major determinant of symptom expression in a susceptible plant. Here, we show the involvement of clover yellow vein virus (ClYVV) HC-Pro in necrotic symptom expression in broad bean (Vicia faba cv. Wase). In this host, lethal necro...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-1073-3

    authors: Yambao ML,Yagihashi H,Sekiguchi H,Sekiguchi T,Sasaki T,Sato M,Atsumi G,Tacahashi Y,Nakahara KS,Uyeda I

    更新日期:2008-01-01 00:00:00

  • A single substitution in amino acid 184 of the NP protein alters the replication and pathogenicity of H5N1 avian influenza viruses in chickens.

    abstract::Changes in the NP gene of H5N1 highly pathogenic avian influenza (HPAI) viruses have previously been shown to affect viral replication, alter host gene expression levels and affect mean death times in infected chickens. Five amino acids at positions 22, 184, 400, 406, and 423 were different between the two recombinant...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-009-0399-4

    authors: Wasilenko JL,Sarmento L,Pantin-Jackwood MJ

    更新日期:2009-01-01 00:00:00

  • Complete genome sequences of blueberry red ringspot virus (Caulimoviridae) isolates from the Czech Republic and Slovenia.

    abstract::Genomic DNA of blueberry red ringspot virus (genus Soymovirus, family Caulimoviridae) from highbush blueberry plants growing for years in the Czech Republic and Slovenia was sequenced. The circular dsDNA genomes consist of 8,303 and 8,299 nt, respectively, and contain eight open reading frames (ORFs) longer than 100 a...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-011-1077-x

    authors: Petrzik K,Přibylová J,Pleško IM,Špak J

    更新日期:2011-10-01 00:00:00

  • Action of 6-(p-hydroxyphenylazo)-uracil on bacteriophage IG 1.

    abstract::IG 1, a temperate phage of Bacillus subtilis, is strongly induced from its lysogens by 6-(p-hydroxyphenylazo)-uracil, an azopyrimidine known as selectively inhibiting the B. subtilis DNA polymerase III. IG 1 phages originated either by induction or infection multiply, abundantly, in the presence of that azopyrimidine,...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01316671

    authors: Fernandes RM,de Lencastre H,Archer LJ

    更新日期:1990-01-01 00:00:00

  • Effect of temperature on cucumber mosaic virus satellite-induced lethal tomato necrosis is helper virus strain dependent.

    abstract::The effect of temperature on the response of tomato (Lycopersicon esculentum Mill. cv. Rutgers) to infections with the necrogenic cucumber mosaic virus (CMV) satellite D-CARNA 5 was investigated with each of four CMV strains D, 1, Y and S functioning as helper virus. At 24 degrees C lethal necrosis was observed in all...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01309724

    authors: Kaper JM,Geletka LM,Wu GS,Tousignant ME

    更新日期:1995-01-01 00:00:00

  • Genetic diversity of porcine sapoviruses in pigs from the Amazon region of Brazil.

    abstract::Sapoviruses (SaVs) belong to the family Caliciviridae and are related to gastroenteritis viruses of humans and animals. These agents have been reported from several countries of the world and represent an important cause of economic loss. The Amazon area has a high degree of diversity of animals and plants, is located...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-013-1904-3

    authors: das Merces Hernandez J,Stangarlin DC,Siqueira JA,de Souza Oliveira D,Portal TM,Barry AF,Dias FA,de Matos JC,Mascarenhas JD,Gabbay YB

    更新日期:2014-05-01 00:00:00

  • Deletion of a decoy epitope in porcine circovirus 2 (PCV2) capsid protein affects the protective immune response in mice.

    abstract::The swine pathogen porcine circovirus type 2 (PCV2) causes significant economic damage worldwide. The PCV2 capsid (CP) residues 169-STIDYFQPNNKR-180 have been identified as a decoy epitope that diverts the host immune response away from protective epitopes. However, the decoy epitope may include important linear or co...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-020-04831-z

    authors: Kim K,Shin M,Hahn TW

    更新日期:2020-12-01 00:00:00

  • In vitro expression and analysis of secreted fowlpox virus CC chemokine-like proteins Fpv060, Fpv061, Fpv116 and Fpv121.

    abstract::The four CC chemokine-like proteins (Fpv060, Fpv061, Fpv116 and Fpv121) of fowlpox virus (FWPV) were over-expressed as His-tagged versions from a T7 promoter/EMCV IRES construct in vitro, by coupled transcription/translation, or in cell culture, by co-infection with two recombinant FWPVs (one expressing the chemokine-...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-005-0560-7

    authors: Jeshtadi A,Henriquet G,Laidlaw SM,Hot D,Zhang Y,Skinner MA

    更新日期:2005-09-01 00:00:00

  • Sequence variation in two genes determines the efficacy of transmission of citrus tristeza virus by the brown citrus aphid.

    abstract::Vector transmission is an important part of the viral infection cycle, yet for many viruses little is known about this process, or how viral sequence variation affects transmission efficacy. Here we examined the effect of substituting genes from the highly transmissible FS577 isolate of citrus tristeza virus (CTV) in ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-016-3070-x

    authors: Harper SJ,Killiny N,Tatineni S,Gowda S,Cowell SJ,Shilts T,Dawson WO

    更新日期:2016-12-01 00:00:00

  • Identification and analysis of the simian varicella virus thymidine kinase gene.

    abstract::The thymidine kinase (TK) of herpesviruses, in contrast to cellular TKs, phosphorylates a variety of substrates including antiherpetic nucleoside analogues. This study reports the identification and DNA sequence of the simian varicella virus (SVV) TK gene. A 32P-labeled varicella zoster virus (VZV) TK DNA probe hybrid...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01718587

    authors: Pumphrey CY,Gray WL

    更新日期:1996-01-01 00:00:00

  • Cytomegalovirus antibodies in tear fluid of patients with retinitis.

    abstract::The diagnosis of cytomegalovirus retinitis (CMV-R) is difficult and usually based on clinical criteria or invasive diagnostic procedures. The purpose of this study was to investigate a possible association between CMV-R and specific anti-CMV antibodies in tears. Paired tear and serum samples were obtained from 96 indi...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-006-0813-0

    authors: Rozanova EB,Teplinskaia LE,Kaliberdina AF,Barisani-Asenbauer T

    更新日期:2006-12-01 00:00:00

  • Complete genome sequence of Brugmansia suaveolens mottle virus, a potyvirus from an ornamental shrub.

    abstract::Brugmansia suaveolens mottle virus (BsMoV) was the first potyvirus isolated from "angel trumpet" (Brugmansia suaveolens), described in Brazil. In this study, the complete nucleotide (nt) genome sequence of BsMoV was determined, and the deduced amino acid (aa) sequence was analyzed. The BsMoV RNA genome consists of 987...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-010-0798-6

    authors: Lucinda N,Inoue-Nagata AK,Kitajima EW,Nagata T

    更新日期:2010-10-01 00:00:00

  • Development of a molecular assay for the general detection of tospoviruses and the distinction between tospoviral species.

    abstract::A Luminex xTAG-based assay for plant-infecting tospoviruses was developed. The test enables the detection of tospoviruses in general and the differentiation of the four important member species of this genus: Tomato spotted wilt virus, Impatiens necrotic spot virus, the proposed 'Capsicum chlorosis virus' and Watermel...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-017-3256-x

    authors: Bald-Blume N,Bergervoet JHW,Maiss E

    更新日期:2017-06-01 00:00:00

  • Rapid detection of orf virus by loop-mediated isothermal amplification based on the DNA polymerase gene.

    abstract::At present, there are no effective antiviral treatments available for contagious ecthyma, and rapid diagnosis is therefore critical for effective control of the disease. Recently, the invention of a novel LAMP technique that can rapidly amplify nucleic acids with high specificity and sensitivity under isothermal condi...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-012-1526-1

    authors: Li J,Song D,He W,Bao Y,Lu R,Su G,Wang G,Lu H,Zhao K,Gao F

    更新日期:2013-04-01 00:00:00

  • Inhibition by monensin of human cytomegalovirus DNA replication.

    abstract::Monensin, at concentrations which depended on the multiplicity of infection, was found to prevent DNA replication of human cytomegalovirus (HCMV) as well as production of viral progeny in human foreskin fibroblasts. The drug did not affect DNA replication of herpes simplex virus. Inhibition of consecutive HCMV DNA syn...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310716

    authors: Kaiser CJ,Radsak K

    更新日期:1987-01-01 00:00:00

  • Pathogenic properties of encephalomyocarditis virus isolates in swine fetuses.

    abstract::The pathogenicity of 5 different encephalomyocarditis (EMC) virus isolates was investigated in swine fetuses following injection of each virus in utero. Laparotomies were performed on 3 pregnant sows in early mid-third (39-40 days) of gestation and on 5 sows in the late mid-third (70-72 days) of gestation, and groups ...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01310517

    authors: Kim HS,Christianson WT,Joo HS

    更新日期:1989-01-01 00:00:00

  • Immune and inflammatory response in pigs during acute influenza caused by H1N1 swine influenza virus.

    abstract::Swine influenza (SI) is an acute respiratory disease of pigs, caused by swine influenza virus (SIV). Little is known about the inflammatory response in the lung during acute SI and its correlation with clinical signs or lung pathology. Moreover, until now there has been a limited amount of data available on the relati...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-014-2116-1

    authors: Pomorska-Mól M,Markowska-Daniel I,Kwit K,Czyżewska E,Dors A,Rachubik J,Pejsak Z

    更新日期:2014-10-01 00:00:00

  • Radial haemolysis in gel: a comparative study with Chikungunya, Japanese encephalitis and rubella viruses, representatives of three genera of Togaviridae family.

    abstract::Optimal conditions of radial haemolysis in gel (HIG) with Chikungunya (Chik) and Japanese encephalitis (JE) viruses were developed and compared with those of rubella virus. Sheep erythrocytes were found preferable for HIG with Chik and JE viruses, unlike rubella virus, where goose erythrocytes gave best results. Roost...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01320619

    authors: Gaidamovich SY,Melnikova EE,Väänänen P,Penttinen K

    更新日期:1980-01-01 00:00:00

  • Using RRT-PCR analysis and virus isolation to determine the prevalence of avian influenza virus infections in ducks at Minto Flats State Game Refuge, Alaska, during August 2005.

    abstract::This study describes surveillance for avian influenza viruses (AIV) in the Minto Flats State Game Refuge, high-density waterfowl breeding grounds in Alaska. Five hundred paired cloacal samples from dabbling ducks (Northern Pintail, Mallard, Green Wing Teal, and Widgeon) were placed into ethanol and viral transport med...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-007-0994-1

    authors: Runstadler JA,Happ GM,Slemons RD,Sheng ZM,Gundlach N,Petrula M,Senne D,Nolting J,Evers DL,Modrell A,Huson H,Hills S,Rothe T,Marr T,Taubenberger JK

    更新日期:2007-01-01 00:00:00

  • Genomic heterogeneity in Pea seed-borne mosaic virus isolates from Pakistan, the centre of diversity of the host species, Pisum sativum.

    abstract::A range of isolates of Pea seed-borne mosaic virus (PSbMV) was compared in the segments of the genome representing the partial NIb/CP/UTR and the partial P1-Pro/HC-Pro coding regions. Nucleotide and amino acid sequences, and a phylogenetic analysis of the CP region, divided isolates with available sequence information...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s007050170038

    authors: Ali A,Randles JW

    更新日期:2001-10-01 00:00:00

  • A new sequence variant of Coleus blumei viroid 1 from the Coleus blumei cultivar "Rainbow Gold'.

    abstract::A viroid was isolated from symptomless Coleus blumei cultivar (cv.) 'Rainbow Gold' plants using the bidirectional PAGE method for analysis of small circular RNA molecules. The viriod was transmitted to viroid-free plants of Coleus blumei cv. 'Scarlet Dragonfly' by mechanical inoculation. Cloning and sequencing reveale...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/BF01718222

    authors: Spieker RL

    更新日期:1996-01-01 00:00:00

  • Isolation of influenza A(H3N2)v virus from pigs and characterization of its biological properties in pigs and mice.

    abstract::Recently, a novel reassortant virus, influenza A(H3N2)v [A(H3N2)v], was identified as the causative pathogen in 307 human cases of influenza in the United States. A(H3N2)v contains the matrix gene from the 2009 pandemic H1N1 (pH1N1) virus, while its other genes originate from H3N2 viruses with triple-reassorted intern...

    journal_title:Archives of virology

    pub_type: 杂志文章

    doi:10.1007/s00705-012-1571-9

    authors: Kim SH,Kim HJ,Jin YH,Yeoul JJ,Lee KK,Oem JK,Lee MH,Park CK

    更新日期:2013-11-01 00:00:00