Transcriptional regulation of the Neurospora circadian clock gene wc-1 affects the phase of circadian output.

Abstract:

:WHITE COLLAR-1 (WC-1) is the limiting component of the White Collar Complex (WCC) controlling expression of the Neurospora circadian clock protein Frequency (FRQ). Accumulation of WC-1 is supported by FRQ on a post-transcriptional level. Here, we show that transcription of wc-1 is organized in a complex way. Three promoters drive transcription of wc-1. Pdist is dependent on WCC. Pprox is independent of WCC in darkness, but inducible by light in a WCC-dependent manner. A third promoter, Pint, is located in the wc-1 open reading frame and promotes expression of an amino-terminally truncated WC-1 isoform of unknown function. Expression of wc-1 by Pdist or Pprox alone, or by a heterologous promoter, affects the entrained phase of circadian conidiation and the response of Neurospora to light. Our results indicate that transcriptional regulation of wc-1 is required to modulate the circadian phase of clock output.

journal_name

EMBO Rep

journal_title

EMBO reports

authors

Káldi K,González BH,Brunner M

doi

10.1038/sj.embor.7400595

keywords:

subject

Has Abstract

pub_date

2006-02-01 00:00:00

pages

199-204

issue

2

eissn

1469-221X

issn

1469-3178

pii

7400595

journal_volume

7

pub_type

杂志文章
  • Antagonistic functions of LMNA isoforms in energy expenditure and lifespan.

    abstract::Alternative RNA processing of LMNA pre-mRNA produces three main protein isoforms, that is, lamin A, progerin, and lamin C. De novo mutations that favor the expression of progerin over lamin A lead to Hutchinson-Gilford progeria syndrome (HGPS), providing support for the involvement of LMNA processing in pathological a...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1002/embr.201338126

    authors: Lopez-Mejia IC,de Toledo M,Chavey C,Lapasset L,Cavelier P,Lopez-Herrera C,Chebli K,Fort P,Beranger G,Fajas L,Amri EZ,Casas F,Tazi J

    更新日期:2014-05-01 00:00:00

  • SLFN11 inhibits checkpoint maintenance and homologous recombination repair.

    abstract::High expression levels of SLFN11 correlate with the sensitivity of human cancer cells to DNA-damaging agents. However, little is known about the underlying mechanism. Here, we show that SLFN11 interacts directly with RPA1 and is recruited to sites of DNA damage in an RPA1-dependent manner. Furthermore, we establish th...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201540964

    authors: Mu Y,Lou J,Srivastava M,Zhao B,Feng XH,Liu T,Chen J,Huang J

    更新日期:2016-01-01 00:00:00

  • A post-translational modification switch controls coactivator function of histone methyltransferases G9a and GLP.

    abstract::Like many transcription regulators, histone methyltransferases G9a and G9a-like protein (GLP) can act gene-specifically as coregulators, but mechanisms controlling this specificity are mostly unknown. We show that adjacent post-translational methylation and phosphorylation regulate binding of G9a and GLP to heterochro...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201744060

    authors: Poulard C,Bittencourt D,Wu DY,Hu Y,Gerke DS,Stallcup MR

    更新日期:2017-08-01 00:00:00

  • Epigenome changes in active and inactive polycomb-group-controlled regions.

    abstract::The Polycomb group (PcG) of proteins conveys epigenetic inheritance of repressed transcriptional states. In Drosophila, the Polycomb repressive complex 1 (PRC1) maintains the silent state by inhibiting the transcription machinery and chromatin remodelling at core promoters. Using immunoprecipitation of in vivo formald...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.7400260

    authors: Breiling A,O'Neill LP,D'Eliseo D,Turner BM,Orlando V

    更新日期:2004-10-01 00:00:00

  • The protein phosphatase 1 regulator PNUTS is a new component of the DNA damage response.

    abstract::The function of protein phosphatase 1 nuclear-targeting subunit (PNUTS)--one of the most abundant nuclear-targeting subunits of protein phosphatase 1 (PP1c)--remains largely uncharacterized. We show that PNUTS depletion by small interfering RNA activates a G2 checkpoint in unperturbed cells and prolongs G2 checkpoint ...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/embor.2010.134

    authors: Landsverk HB,Mora-Bermúdez F,Landsverk OJ,Hasvold G,Naderi S,Bakke O,Ellenberg J,Collas P,Syljuåsen RG,Küntziger T

    更新日期:2010-11-01 00:00:00

  • Reconsidering the evolution of eukaryotic selenoproteins: a novel nonmammalian family with scattered phylogenetic distribution.

    abstract::While the genome sequence and gene content are available for an increasing number of organisms, eukaryotic selenoproteins remain poorly characterized. The dual role of the UGA codon confounds the identification of novel selenoprotein genes. Here, we describe a comparative genomics approach that relies on the genome-wi...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.7400036

    authors: Castellano S,Novoselov SV,Kryukov GV,Lescure A,Blanco E,Krol A,Gladyshev VN,Guigó R

    更新日期:2004-01-01 00:00:00

  • Xist and the order of silencing.

    abstract::X inactivation is the mechanism by which mammals adjust the genetic imbalance that arises from the different numbers of gene-rich X-chromosomes between the sexes. The dosage difference between XX females and XY males is functionally equalized by silencing one of the two X chromosomes in females. This dosage-compensati...

    journal_title:EMBO reports

    pub_type: 杂志文章,评审

    doi:10.1038/sj.embor.7400871

    authors: Ng K,Pullirsch D,Leeb M,Wutz A

    更新日期:2007-01-01 00:00:00

  • Cyclic expression of the voltage-gated potassium channel KV10.1 promotes disassembly of the primary cilium.

    abstract::The primary cilium, critical for morphogenic and growth factor signaling, is assembled upon cell cycle exit, but the links between ciliogenesis and cell cycle progression are unclear. KV10.1 is a voltage-gated potassium channel frequently overexpressed in tumors. We have previously reported that expression of KV10.1 i...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201541082

    authors: Sánchez A,Urrego D,Pardo LA

    更新日期:2016-05-01 00:00:00

  • Secured cutting: controlling separase at the metaphase to anaphase transition.

    abstract::The final irreversible step in the duplication and distribution of genomes to daughter cells takes place at the metaphase to anaphase transition. At this point aligned sister chromatid pairs split and separate. During metaphase, cohesion between sister chromatids is maintained by the chromosomal multi-subunit cohesin ...

    journal_title:EMBO reports

    pub_type: 杂志文章,评审

    doi:10.1093/embo-reports/kve113

    authors: Uhlmann F

    更新日期:2001-06-01 00:00:00

  • Widespread PrPSc accumulation in muscles of hamsters orally infected with scrapie.

    abstract::Scrapie, bovine spongiform encephalopathy and chronic wasting disease are orally communicable, transmissible spongiform encephalopathies (TSEs). As zoonotic transmissions of TSE agents may pose a risk to human health, the identification of reservoirs for infectivity in animal tissues and their exclusion from human con...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.embor827

    authors: Thomzig A,Kratzel C,Lenz G,Krüger D,Beekes M

    更新日期:2003-05-01 00:00:00

  • A conserved element in Myc that negatively regulates its proapoptotic activity.

    abstract::Myc is an oncoprotein transcription factor that promotes cell proliferation and apoptosis. Analysis of highly conserved elements within vertebrate Myc proteins has been instrumental in defining the functions of the Myc protein. Here, we probe the role of a highly conserved, but little studied, element within the centr...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.7400333

    authors: Herbst A,Hemann MT,Tworkowski KA,Salghetti SE,Lowe SW,Tansey WP

    更新日期:2005-02-01 00:00:00

  • Type 1 metabotropic glutamate receptors (mGlu1) trigger the gating of GluD2 delta glutamate receptors.

    abstract::The orphan GluD2 receptor belongs to the ionotropic glutamate receptor family but does not bind glutamate. Ligand-gated GluD2 currents have never been evidenced, and whether GluD2 operates as an ion channel has been a long-standing question. Here, we show that GluD2 gating is triggered by type 1 metabotropic glutamate...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1002/embr.201337371

    authors: Ady V,Perroy J,Tricoire L,Piochon C,Dadak S,Chen X,Dusart I,Fagni L,Lambolez B,Levenes C

    更新日期:2014-01-01 00:00:00

  • Switching of chromatin-remodelling complexes for oestrogen receptor-alpha.

    abstract::The female sex steroid hormone oestrogen stimulates both cell proliferation and cell differentiation in target tissues. These biological actions are mediated primarily through nuclear oestrogen receptors (ERs). The ligand-dependent transactivation of ERs requires several nuclear co-regulator complexes; however, the ce...

    journal_title:EMBO reports

    pub_type: 杂志文章,收录出版

    doi:10.1038/embor.2008.55

    authors: Okada M,Takezawa S,Mezaki Y,Yamaoka I,Takada I,Kitagawa H,Kato S

    更新日期:2008-06-01 00:00:00

  • KAP1 regulates endogenous retroviruses in adult human cells and contributes to innate immune control.

    abstract::Endogenous retroviruses (ERVs) have accumulated in vertebrate genomes and contribute to the complexity of gene regulation. KAP1 represses ERVs during development by its recruitment to their repetitive sequences through KRAB zinc-finger proteins (KZNFs), but little is known about the regulation of ERVs in adult tissues...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201745000

    authors: Tie CH,Fernandes L,Conde L,Robbez-Masson L,Sumner RP,Peacock T,Rodriguez-Plata MT,Mickute G,Gifford R,Towers GJ,Herrero J,Rowe HM

    更新日期:2018-10-01 00:00:00

  • Brown adipocyte glucose metabolism: a heated subject.

    abstract::The energy expending and glucose sink properties of brown adipose tissue (BAT) make it an attractive target for new obesity and diabetes treatments. Despite decades of research, only recently have mechanistic studies started to provide a more complete and consistent picture of how activated brown adipocytes handle glu...

    journal_title:EMBO reports

    pub_type: 杂志文章,评审

    doi:10.15252/embr.201846404

    authors: Hankir MK,Klingenspor M

    更新日期:2018-09-01 00:00:00

  • A selective PIKfyve inhibitor blocks PtdIns(3,5)P(2) production and disrupts endomembrane transport and retroviral budding.

    abstract::Phosphoinositides have crucial roles in cellular controls, many of which have been established through the use of small-molecule inhibitors. Here, we describe YM201636, a potent inhibitor of the mammalian class III phosphatidylinositol phosphate kinase PIKfyve, which synthesizes phosphatidylinositol 3,5-bisphosphate. ...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.7401155

    authors: Jefferies HB,Cooke FT,Jat P,Boucheron C,Koizumi T,Hayakawa M,Kaizawa H,Ohishi T,Workman P,Waterfield MD,Parker PJ

    更新日期:2008-02-01 00:00:00

  • HIF1α deubiquitination by USP8 is essential for ciliogenesis in normoxia.

    abstract::Loss of primary cilia is a key feature of von Hippel-Lindau tumor suppressor (VHL)-associated pathology. Although VHL-deficiency predisposes cells to precipitous cilia disassembly in response to growth factor cues, it does not affect ciliogenesis. Here, using a siRNA-based screen to find genes that are essential for c...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1002/embr.201337688

    authors: Troilo A,Alexander I,Muehl S,Jaramillo D,Knobeloch KP,Krek W

    更新日期:2014-01-01 00:00:00

  • Initiation of epigenetic reprogramming of the X chromosome in somatic nuclei transplanted to a mouse oocyte.

    abstract::The active and inactive X chromosomes have distinct epigenetic marks in somatic nuclei, which undergo reprogramming after transplantation into oocytes. We show that, despite the disappearance of Xist RNA coating in 30 min, the epigenetic memory of the inactive X persists with the precocious appearance of histone H3 tr...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.7400461

    authors: Bao S,Miyoshi N,Okamoto I,Jenuwein T,Heard E,Azim Surani M

    更新日期:2005-08-01 00:00:00

  • Map7/7D1 and Dvl form a feedback loop that facilitates microtubule remodeling and Wnt5a signaling.

    abstract::The Wnt signaling pathway can be grouped into two classes, the β-catenin-dependent and β-catenin-independent pathways. Wnt5a signaling through a β-catenin-independent pathway promotes microtubule (MT) remodeling during cell-substrate adhesion, cell migration, and planar cell polarity formation. Although Wnt5a signalin...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201745471

    authors: Kikuchi K,Nakamura A,Arata M,Shi D,Nakagawa M,Tanaka T,Uemura T,Fujimori T,Kikuchi A,Uezu A,Sakamoto Y,Nakanishi H

    更新日期:2018-07-01 00:00:00

  • The M-type receptor PLA2R regulates senescence through the p53 pathway.

    abstract::Senescence is a stable proliferative arrest induced by various stresses such as telomere erosion, oncogenic or oxidative stress. Compelling evidence suggests that it acts as a barrier against tumour development. Describing new mechanisms that favour an escape from senescence can thus reveal new insights into tumorigen...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/embor.2008.255

    authors: Augert A,Payré C,de Launoit Y,Gil J,Lambeau G,Bernard D

    更新日期:2009-03-01 00:00:00

  • Enhanced microRNA accumulation through stemloop-adjacent introns.

    abstract::MicroRNAs (miRNAs) originate from stemloop-forming precursor RNAs found in longer primary transcripts that often contain introns. We show that in plants, those introns, when located 3' of the stemloop, can promote mature miRNA accumulation, through a mechanism that likely operates at the level of miRNA processing or s...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/embor.2013.58

    authors: Schwab R,Speth C,Laubinger S,Voinnet O

    更新日期:2013-07-01 00:00:00

  • AKT-dependent phosphorylation of Niban regulates nucleophosmin- and MDM2-mediated p53 stability and cell apoptosis.

    abstract::Although Niban is highly expressed in human cancer cells, the cellular functions of Niban remain largely unknown. We demonstrate here that ultraviolet irradiation induces phosphorylation of Niban at S602 by AKT, which increases the association of Niban with nucleophosmin and disassociation of nucleophosmin from the MD...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/embor.2012.53

    authors: Ji H,Ding Z,Hawke D,Xing D,Jiang BH,Mills GB,Lu Z

    更新日期:2012-06-01 00:00:00

  • ARGONAUTE 1 homeostasis invokes the coordinate action of the microRNA and siRNA pathways.

    abstract::ARGONAUTE 1 (AGO1) slices endogenous messenger RNAs (mRNAs) during both microRNA (miRNA)- and short interfering RNA (siRNA)-guided post-transcriptional silencing. We have previously reported that AGO1 homeostasis is maintained through the repressive action of miR168 on AGO1 mRNA and the stabilizing effect of AGO1 prot...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/embor.2009.32

    authors: Mallory AC,Vaucheret H

    更新日期:2009-05-01 00:00:00

  • The biology of IQGAP proteins: beyond the cytoskeleton.

    abstract::IQGAP scaffold proteins are evolutionarily conserved in eukaryotes and facilitate the formation of complexes that regulate cytoskeletal dynamics, intracellular signaling, and intercellular interactions. Fungal and mammalian IQGAPs are implicated in cytokinesis. IQGAP1, IQGAP2, and IQGAP3 have diverse roles in vertebra...

    journal_title:EMBO reports

    pub_type: 杂志文章,评审

    doi:10.15252/embr.201439834

    authors: Hedman AC,Smith JM,Sacks DB

    更新日期:2015-04-01 00:00:00

  • Wnt regulates amino acid transporter Slc7a5 and so constrains the integrated stress response in mouse embryos.

    abstract::Amino acids are essential for cellular metabolism, and it is important to understand how nutrient supply is coordinated with changing energy requirements during embryogenesis. Here, we show that the amino acid transporter Slc7a5/Lat1 is highly expressed in tissues undergoing morphogenesis and that Slc7a5-null mouse em...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.15252/embr.201948469

    authors: Poncet N,Halley PA,Lipina C,Gierliński M,Dady A,Singer GA,Febrer M,Shi YB,Yamaguchi TP,Taylor PM,Storey KG

    更新日期:2020-01-07 00:00:00

  • Estrogen receptors: orchestrators of pleiotropic cellular responses.

    abstract::Estrogen receptors (ERs) orchestrate both transcriptional and non-genomic functions in response to estrogens, xenoestrogens and signals emanating from growth factor signalling pathways. The pleiotropic and tissue-specific effects of estrogens are likely to be mediated by the differential expression of distinct estroge...

    journal_title:EMBO reports

    pub_type: 杂志文章,评审

    doi:10.1093/embo-reports/kve185

    authors: Moggs JG,Orphanides G

    更新日期:2001-09-01 00:00:00

  • Transcriptional properties and splicing of the flamenco piRNA cluster.

    abstract::In Drosophila, the piRNA cluster, flamenco, produces most of the piRNAs (PIWI-interacting RNAs) that silence transposable elements in the somatic follicle cells during oogenesis. These piRNAs are thought to be processed from a long single-stranded precursor transcript. Here, we demonstrate that flamenco transcription ...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1002/embr.201337898

    authors: Goriaux C,Desset S,Renaud Y,Vaury C,Brasset E

    更新日期:2014-04-01 00:00:00

  • Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain.

    abstract::Parkin, a product of the causative gene of autosomal-recessive juvenile parkinsonism (AR-JP), is a RING-type E3 ubiquitin ligase and has an amino-terminal ubiquitin-like (Ubl) domain. Although a single mutation that causes an Arg to Pro substitution at position 42 of the Ubl domain (the Arg 42 mutation) has been ident...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1038/sj.embor.embor764

    authors: Sakata E,Yamaguchi Y,Kurimoto E,Kikuchi J,Yokoyama S,Yamada S,Kawahara H,Yokosawa H,Hattori N,Mizuno Y,Tanaka K,Kato K

    更新日期:2003-03-01 00:00:00

  • The adenovirus protein Gam1 interferes with sumoylation of histone deacetylase 1.

    abstract::The adenovirus early gene product Gam1 is crucial for virus replication and induces certain cellular genes by inactivating histone deacetylase 1 (HDAC1). We demonstrate that Gam1 (i) destroys promyelocitic leukemia nuclear bodies, (ii) delocalizes SUMO-1 into the cytoplasm and (iii) influences the SUMO-1 pathway. In a...

    journal_title:EMBO reports

    pub_type: 杂志文章

    doi:10.1093/embo-reports/kvf213

    authors: Colombo R,Boggio R,Seiser C,Draetta GF,Chiocca S

    更新日期:2002-11-01 00:00:00

  • Yeast evolution and ecology meet genomics.

    abstract::The first EMBO Conference on Experimental Approaches to Evolution and Ecology in Yeast was held in Heidelberg, Germany, at the end of September 2010. What might sound like a rather narrow topic actually covered a broad range of interests, approaches, and systems and generated a great deal of excitement among participa...

    journal_title:EMBO reports

    pub_type:

    doi:10.1038/embor.2010.204

    authors: Dunham MJ,Louis EJ

    更新日期:2011-01-01 00:00:00