Novel nuclear-encoded proteins interacting with a plastid sigma factor, Sig1, in Arabidopsis thaliana.

Abstract:

:Sigma factor binding proteins are involved in modifying the promoter preferences of the RNA polymerase in bacteria. We found the nuclear encoded protein (SibI) that is transported into chloroplasts and interacts specifically with the region 4 of Sig1 in Arabidopsis. SibI and its homologue, T3K9.5 are novel proteins, which are not homologous to any protein of known function. The expression of sibI was tissue specific, light dependent, and developmentally timed. We suggest the transcriptional regulation by sigma factor binding proteins to function in the plastids of higher plant.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Morikawa K,Shiina T,Murakami S,Toyoshima Y

doi

10.1016/s0014-5793(02)02388-8

keywords:

subject

Has Abstract

pub_date

2002-03-13 00:00:00

pages

300-4

issue

2-3

eissn

0014-5793

issn

1873-3468

pii

S0014579302023888

journal_volume

514

pub_type

杂志文章
  • mRNA 5' ends targeted by cytoplasmic recapping cluster at CAGE tags and select transcripts are alternatively spliced.

    abstract::Until cytoplasmic recapping was discovered, decapping was thought to irreversibly destine an mRNA to degradation. Contradicting this idea, we readily observe mRNAs targeted by cytoplasmic capping in uncapped, yet stable forms. 5' rapid amplification of cDNA ends (RACE) shows that nearly all uncapped ends correspond to...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1002/1873-3468.13349

    authors: Berger MR,Alvarado R,Kiss DL

    更新日期:2019-04-01 00:00:00

  • DNA repair activity in protein extracts from rat tissues.

    abstract::Among DNA repair pathways, nucleotide excision repair (NER) is able to recognize and process a wide variety of DNA lesions. The NER mechanism can be summarized in two stages: incision/excision of the lesion and DNA repair synthesis. Here, we have assessed the repair synthesis activity of protein extracts from differen...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)01077-6

    authors: Coudoré F,Calsou P,Salles B

    更新日期:1997-09-15 00:00:00

  • Mutual arrangement of histone H1 molecules in extended chromatin. Chymotryptic digestion of cross-linked H1 histone dimers.

    abstract::Mutual arrangement of histone H1 molecules in chromatin extended in low salt-EDTA buffer and additionally in the presence of urea was studied by means of reversible cross-linking combined with chymotryptic digestion. In the chromatins tested, the chymotryptic halves of H1 were cross-linked in all possible combinations...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(83)81164-8

    authors: Nikolaev LG,Glotov BO,Dashkevich VK,Barbashov SF,Severin ES

    更新日期:1983-10-31 00:00:00

  • Cloning of cDNA and genomic DNA for human cytochrome P-45011 beta.

    abstract::A full-length cDNA clone encoding steroid 11 beta-hydroxylase (P-45011 beta) has been isolated from a cDNA library derived from human adrenal tumor. The insert of the clone contains an open reading frame encoding a protein of 503 amino acid residues together with a 4 bp 5'-untranslated region and a 576 bp 3'-untransla...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81190-y

    authors: Kawamoto T,Mitsuuchi Y,Toda K,Miyahara K,Yokoyama Y,Nakao K,Hosoda K,Yamamoto Y,Imura H,Shizuta Y

    更新日期:1990-09-03 00:00:00

  • Boric acid reversibly inhibits the second step of pre-mRNA splicing.

    abstract::Several approaches have been used to identify the factors involved in mRNA splicing. None of them, however, comprises a straightforward reversible method for inhibiting the second step of splicing using an external reagent other than a chelator. This investigation demonstrates that the addition of boric acid to an in ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(03)00928-1

    authors: Shomron N,Ast G

    更新日期:2003-09-25 00:00:00

  • Purification and characterization of the cystinyl bond cleaving yeast aminopeptidase yscXVI.

    abstract::Aminopeptidase yscXVI was purified from the yeast Saccharomyces cerevisiae. By SDS-PAGE the enzyme has a molecular weight of 45,000 Da, and in chromatofocusing, elution was observed at pH 6.2. The synthetic substrate cystinyl-4-nitroanilide (Km 22.5 microM, Vmax 12.9 mU/mg) is cleaved most efficiently in the pH range ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)81566-i

    authors: Tisljar U,Wolf DH

    更新日期:1993-05-10 00:00:00

  • Protein phosphorylation in isolated nuclei from etiolated Avena seedlings. Effects of red/far-red light and cholera toxin.

    abstract::We have studied the phosphorylation/dephosphorylation of several nuclear proteins in isolated nuclei from etiolated Avena seedlings as a function of red/far-red light. The effect of stimulatory (ADP-ribosylation by cholera toxin) or inhibitory (GDP beta S) conditions for GTP-binding proteins was also studied. Red or f...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(91)80510-a

    authors: Romero LC,Biswal B,Song PS

    更新日期:1991-05-06 00:00:00

  • Cloning of a glycine receptor subtype expressed in rat brain and spinal cord during a specific period of neuronal development.

    abstract::Complementary (c) DNAs encoding a glycine receptor (GlyR) isomer were cloned from libraries constructed in lambda ZAPII with poly (A)+ RNA of neonatal rat spinal cord. Northern blot analysis revealed that RNA hybridized to the cloned cDNA is detectable only for a period of late embryonic/early postnatal stage of the s...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(91)80383-e

    authors: Akagi H,Hirai K,Hishinuma F

    更新日期:1991-04-09 00:00:00

  • MIG-13 controls anteroposterior cell migration by interacting with UNC-71/ADM-1 and SRC-1 in Caenorhabditis elegans.

    abstract::The transmembrane protein MIG-13 is a key regulator required for anterior migration of neural cells in Caenorhabditis elegans, but the signaling mechanisms involved remain unknown. Here, we isolated a suppressor mutation in the unc-71/adm-1 gene, which rescued the AVM neuron migration defect in mig-13 mutants. Genetic...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2012.01.031

    authors: Masuda H,Nakamura K,Takata N,Itoh B,Hirose T,Moribe H,Mekada E,Okada M

    更新日期:2012-03-23 00:00:00

  • Stereoelectronic effects in RNase-catalysed reactions of dinucleoside phosphate cleavage.

    abstract::The rate at which dinucleoside phosphates are cleaved by RNases is supposed to be determined by the mole fraction of enzyme-substrate complexes in which the phosphodiester moiety of a dinucleoside phosphate has a highly reactive conformation. The mole fraction of such complexes for a particular RNase depends on the na...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(85)80521-4

    authors: Yakovlev GI,Bocharov AL,Moiseyev GP,Mikhaylov SN

    更新日期:1985-01-07 00:00:00

  • Activation of phospholipase D by osmotic cell swelling.

    abstract::In response to osmotic cell swelling, Intestine 407 cells react with a rapid and transient activation of phospholipase D (PLD). To investigate the role of PLD during the regulatory volume decrease, cells were treated with 1-butanol resulting in a depletion of PLD substrates. Activation of volume-regulated anion channe...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2004.04.063

    authors: Tomassen SF,van der Wijk T,de Jonge HR,Tilly BC

    更新日期:2004-05-21 00:00:00

  • Solubilization and partial purification of protein kinase systems from brain membranes that phosphorylate calspectin. A spectrin-like calmodulin-binding protein (fodrin).

    abstract::In brain tissue a spectrin-like calmodulin-binding protein calspectin, or fodrin, is concentrated in a synaptosome fraction, where most of the calspectin is associated with the synaptic membranes. This endogenous calspectin was phosphorylated by protein kinase system(s) associated with the membranes. Here, we report t...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(82)81331-8

    authors: Sobue K,Kanda K,Kakiuchi S

    更新日期:1982-12-13 00:00:00

  • A protein conformational change associated with the photoreduction of the primary and secondary quinones in the bacterial reaction center.

    abstract::A comparison is made between the PQA----P+QA- and PQAQB----P+QAQB-transitions in Rps. viridis and Rb. sphaeroides reaction centers (RCs) by the use of light-induced Fourier transform infrared (FTIR) difference spectroscopy. In Rb. sphaeroides RCs, we identify a signal at 1650 cm-1 which is present in the P+QA-minus-PQ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81506-j

    authors: Nabedryk E,Bagley KA,Thibodeau DL,Bauscher M,Mäntele W,Breton J

    更新日期:1990-06-18 00:00:00

  • Amino acid sequences of cytotoxin-like basic proteins derived from cobra venoms.

    abstract::Amino acid sequences of cytotoxin-like basic proteins (CLBPs), purified from the venoms of Formosan cobra (Naja naja atra) and Indian cobra (Naja naja), were reinvestigated. The determined sequences differed from those reported previously by Takechi et al. [(1985) Biochem. Int. 11, 795-802; (1987) Biochem. Int. 14, 14...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(89)81561-3

    authors: Inoue S,Okumura K,Tsujino M,Ohkura K,Ikeda K,Takechi M,Tanaka Y,Hayashi K

    更新日期:1989-11-06 00:00:00

  • α-Synuclein modifies huntingtin aggregation in living cells.

    abstract::Several neurodegenerative disorders are characterized by the accumulation of proteinaceous inclusions in the central nervous system. These inclusions are frequently composed of a mixture of aggregation-prone proteins. Here, we used a bimolecular fluorescence complementation assay to study the initial steps of the co-a...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2011.11.019

    authors: Herrera F,Outeiro TF

    更新日期:2012-01-02 00:00:00

  • Molecular identification of the enzyme responsible for the mitochondrial NADH-supported ammonium-dependent hydrogen peroxide production.

    abstract::A homogeneous protein with a subunit apparent molecular mass of ∼50 kDa that catalyzes the previously described mitochondrial NADH-supported ammonium-stimulated hydrogen peroxide production (Grivennikova, V.G., Gecchini, G. and Vinogradov, A.D. (2008) FEBS Lett. 583, 1287-1291) was purified from the mitochondrial matr...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2010.12.019

    authors: Kareyeva AV,Grivennikova VG,Cecchini G,Vinogradov AD

    更新日期:2011-01-21 00:00:00

  • In vitro expressed dystrophin fragments do not associate with each other.

    abstract::Dystrophin, a component of the muscle membrane cytoskeleton, is the protein altered in Duchenne Muscular Dystrophy (DMD) and Becker Muscular Dystrophy (BMD). Dystrophin shares significant homology with other cytoskeletal proteins, such as alpha-actinin and spectrin. On the basis of its sequence similarity with alpha-a...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00454-7

    authors: Chan Y,Kunkel LM

    更新日期:1997-06-30 00:00:00

  • Expression of Mona (monocytic adapter) in myeloid progenitor cells results in increased and prolonged MAP kinase activation upon macrophage colony-stimulating factor stimulation.

    abstract::Mona is an SH3 and SH2 domain-containing adapter molecule that is induced during monocytic differentiation. Here we have first shown that M-CSFR is the major Mona partner in M-CSF signaling, the interaction being mediated through tyrosine 697 of the receptor. Next we asked whether Mona expression would alter the Ras/M...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01906-2

    authors: Bourgin C,Bourette R,Mouchiroud G,Arnaud S

    更新日期:2000-09-01 00:00:00

  • Decrease of cellular ATP by dihexanoylglycerol may limit responses to protein kinase C activation.

    abstract::1,2-sn-Dihexanoylglycerol (HHG) reduced the ATP content of HL-60 cells. This concentration-related (10-100 microM) effect reached a maximum of over 90%, was enantiomerically specific and not accompanied by release of lactate dehydrogenase. Oleoylacetylglycerols (3-100 microM) had no effect on ATP levels while phorbol ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)80036-4

    authors: Dawson J,Thompson NT,Bonser RW,Hodson HF,Garland LG

    更新日期:1987-04-06 00:00:00

  • Structurally conserved and functionally divergent yeast Ssu72 phosphatases.

    abstract::The eukaryotic Ssu72 factor is involved in several RNA biogenesis processes. It has phosphatase activity on the carboxy-terminal domain (CTD) of the major subunit of RNA polymerase II. The Kluyveromyces lactis Ssu72 (KlSsu72) shows in vitro phosphatase activity for the pNPP substrate, and this activity is inhibited by...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2013.06.044

    authors: Rodríguez-Torres AM,Lamas-Maceiras M,García-Díaz R,Freire-Picos MA

    更新日期:2013-08-19 00:00:00

  • Changes in the expression of guanine nucleotide-binding proteins during differentiation of 3T3-F442A cells in a hormonally defined medium.

    abstract::Using specific antisera, the expression of the G protein alpha subunits, G8, G(i1), G(i2), G(i3) and G0, were determined in 3T3-F442A cells during their differentiation to adipocytes in a hormonally defined medium. Differentiation caused distinct increases in the expression of two Gs isoforms and decreases in the expr...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)80942-n

    authors: Kilgour E,Anderson NG

    更新日期:1993-08-16 00:00:00

  • Astrocyte differentiation mediated by LIF in cooperation with BMP2.

    abstract::Leukemia inhibitory factor (LIF) and bone morphogenetic protein (BMP) 2 signal via different receptor systems. We have recently demonstrated that simultaneous stimulation of fetal mouse neuroepithelial cells with these distinct types of cytokines synergistically induces astrocyte differentiation in a 2-day culture. He...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00997-7

    authors: Nakashima K,Yanagisawa M,Arakawa H,Taga T

    更新日期:1999-08-20 00:00:00

  • Identification and characterization of functional domains in a mixed lineage kinase LZK.

    abstract::The mixed lineage kinase (MLK) family is a recently described protein kinase family. The MLKs contain a kinase domain followed by a dual leucine zipper-like motif. We previously reported the molecular cloning of LZK (leucine zipper-bearing kinase), a novel MLK, and that LZK activated the c-Jun NH2 terminal kinase (JNK...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)02432-7

    authors: Ikeda A,Masaki M,Kozutsumi Y,Oka S,Kawasaki T

    更新日期:2001-01-19 00:00:00

  • The first constant domain (C(H)1 and C(L)) of an antibody used as heterodimerization domain for bispecific miniantibodies.

    abstract::Bispecific miniantibodies were constructed by genetically fusing the C(H)1 domain of an IgG1 to the C-terminus of a single-chain Fv fragment (scFv-425), specific for the EGF receptor, and fusing the C(L) domain of a kappa light chain to the C-terminus of a scFv specific for CD2 (scFv-M1). An efficient dicistronic gene...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)00021-0

    authors: Müller KM,Arndt KM,Strittmatter W,Plückthun A

    更新日期:1998-01-30 00:00:00

  • Coupled rotation within single F0F1 enzyme complexes during ATP synthesis or hydrolysis.

    abstract::F0F1 ATP synthases are the smallest rotary motors in nature and work as ATP factories in bacteria, plants and animals. Here we report on the first observation of intersubunit rotation in fully coupled single F0F1 molecules during ATP synthesis or hydrolysis. We investigate the Na+-translocating ATP synthase of Propion...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(02)03097-1

    authors: Kaim G,Prummer M,Sick B,Zumofen G,Renn A,Wild UP,Dimroth P

    更新日期:2002-08-14 00:00:00

  • Water channel activities of Mimosa pudica plasma membrane intrinsic proteins are regulated by direct interaction and phosphorylation.

    abstract::cDNAs encoding aquaporins PIP1;1, PIP2;1, and TIP1;1 were isolated from Mimosa pudica (Mp) cDNA library. MpPIP1;1 exhibited no water channel activity; however, it facilitated the water channel activity of MpPIP2;1 in a phosphorylation-dependent manner. Mutagenesis analysis revealed that Ser-131 of MpPIP1;1 was phospho...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2005.06.082

    authors: Temmei Y,Uchida S,Hoshino D,Kanzawa N,Kuwahara M,Sasaki S,Tsuchiya T

    更新日期:2005-08-15 00:00:00

  • Two identical hydrophobic clusters are present on the same actin monomer: interaction between one myosin subfragment-1 and two actin monomers.

    abstract::Two-dimensional hydrophobic clusters analysis (HCA) was used to compare the distribution of hydrophobic clusters along various actin sequence. HCA-deduced patterns were not altered by amino-acid variations throughout the evolution of actin and we observed similar hydrophobic motifs comprising myosin subfragment-1 ATP-...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)01044-f

    authors: Labbé JP,Boyer M,Benyamin Y

    更新日期:1995-10-16 00:00:00

  • In vitro nuclear reconstitution could be induced in a plant cell-free system.

    abstract::A cell-free system derived from carrot cell cytosol extract has been developed for reassembling nuclear structure around the added demembranated sperm chromatin of Xenopus. Morphological evidence suggests that reassembled nuclei display the typical characteristics of normal eukaryotic nuclei, such as double-layered nu...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01938-4

    authors: Zhao Y,Liu X,Wu M,Tao W,Zhai Z

    更新日期:2000-09-01 00:00:00

  • Substrate-induced structural alterations of Mycobacterial mycothione reductase and critical residues involved.

    abstract::Redox homeostasis is a prerequisite for survival of the pathogen Mycobacterium tuberculosis (Mtb) which employs the low molecular weight thiol mycothiol (MSH). The Mycobacterial NADPH-dependent mycothione reductase (MtMtr), composed of an NADPH-, FAD-, and a dimerization-domain connected by linkers, regulates the bala...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1002/1873-3468.12984

    authors: Kumar A,Subramanian Manimekalai MS,Grüber G

    更新日期:2018-02-01 00:00:00

  • Gln(84) of moloney murine leukemia virus reverse transcriptase regulates the incorporation rates of ribonucleotides and deoxyribonucleotides.

    abstract::Moloney murine leukemia virus reverse transcriptase (RT) selectively uses deoxyribonucleotides over ribonucleotides (rNTPs) as substrates. Substitution of F155 with valine (F155V) was previously found to increase the enzyme's affinity for rNTPs, though without affecting the V(max) for catalysis, and thereby conferred ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2006.01.044

    authors: Liu S,Goff SP,Gao G

    更新日期:2006-02-20 00:00:00