Phylogeny and expression of paralogous and orthologous sulphate transporter genes in diploid and hexaploid wheats.

abstract：:Powdery mildew (caused by Microsphaera diffusa Cooke & Peck) is a common disease of soybean in many soybean-growing regions of the world and under greenhouse conditions. The previously reported Rmd locus of soybean for resistance to powdery mildew was mapped on soybean molecular linkage group J (chromosome 16). We hav...

journal_title：Genome

authors： Kang ST,Mian MA

更新日期：2010-05-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:The use of random amplified polymorphic DNA (RAPD) markers for evaluating seed purity in a commercial F1-hybrid cabbage (Brassica oleracea var. capitata) cultivar is demonstrated. Genomic DNA isolated from single ungerminated seed was found to be suitable for RAPD analysis. DNA from F1-hybrid and its parental lines wa...

journal_title：Genome

authors： Crockett PA,Bhalla PL,Lee CK,Singh MB

更新日期：2000-04-01 00:00:00

abstract：:Nematodes are frequently cited as underrepresented in faunistic surveys using DNA barcoding with COI. This underrepresentation is generally attributed to a limited presence of nematodes in DNA databases which, in turn, is often ascribed to structural variability and high evolutionary rates in nematode mitochondrial ge...

journal_title：Genome

authors： Powers TO,Harris TS,Higgins RS,Mullin PG,Powers KS

更新日期：2020-06-11 00:00:00

abstract：:The first quantitative trait locus (QTL) analysis of multiple agronomic traits in the model legume Lotus japonicus was performed with a population of recombinant inbred lines derived from Miyakojima MG-20 x Gifu B-129. Thirteen agronomic traits were evaluated in 2004 and 2005: traits of vegetative parts (plant height,...

journal_title：Genome

authors： Gondo T,Sato S,Okumura K,Tabata S,Akashi R,Isobe S

更新日期：2007-07-01 00:00:00

abstract：:A cytobiotaxonomic study of the medically important insect vector Simulium ochraceum s.l. revealed two sibling species and one cytotype from various endemic and nonendemic zones of human onchocerciasis in Guatemala and Mexico. Polytene chromosome maps and idiograms as well as notes on the biology of the three taxa des...

journal_title：Genome

authors： Hirai H,Procunier WS,Ochoa JO,Uemoto K

更新日期：1994-02-01 00:00:00

abstract：:Chamaecyparis nootkatensis is an ecologically and economically important conifer of the north Pacific coastal forests. To aid in studies of clonal structure and genetic differentiation of this and related species, we isolated and characterized microsatellites from C. nootkatensis. A microsatellite-enriched library yie...

journal_title：Genome

authors： Bérubé Y,Ritland C,Ritland K

更新日期：2003-06-01 00:00:00

abstract：:The emergence of next generation sequencing has increased by several orders of magnitude the amount of data available for phylogenetics. Reduced representation approaches, such as restriction-sited associated DNA sequencing (RADseq), have proven useful for phylogenetic studies of non-model species at a wide range of p...

journal_title：Genome

authors： Fitz-Gibbon S,Hipp AL,Pham KK,Manos PS,Sork VL

更新日期：2017-09-01 00:00:00

abstract：:The superoxide dismutases (SODs) protect oxygen-using cells against reactive oxygen species, the potentially toxic by-products of respiration, oxidative metabolism, and radiation. We have previously shown that genetic disruption of CuZn SOD (SOD1) in Drosophila imparts a recessive phenotype of reduced lifespan, infert...

journal_title：Genome

authors： Woodruff RC,Phillips JP,Hilliker AJ

更新日期：2004-12-01 00:00:00

abstract：:Intermediate wheatgrass (Thinopyrum intermedium (Host) Barkworth & D.R. Dewey), a segmental autoallohexaploid (2n = 6x = 42), is not only an important forage crop but also a valuable gene reservoir for wheat (Triticum aestivum L.) improvement. Throughout the scientific literature, there continues to be disagreement as...

journal_title：Genome

authors： Wang RR,Larson SR,Jensen KB,Bushman BS,DeHaan LR,Wang S,Yan X

更新日期：2015-02-01 00:00:00

abstract：:Paenibacillus terrae NK3-4 is a plant growth-promoting rhizobacterium that may be useful for controlling plant diseases. We conducted a genomic analysis and identified the genes mediating antimicrobial functions. Additionally, an extracellular antifungal protein component was isolated and identified. The draft genome ...

journal_title：Genome

authors： Yu WQ,Zheng GP,Qiu W,Yan FC,Liu WZ,Liu WX

更新日期：2018-10-01 00:00:00

abstract：:Orobanche crenata Forsk. is a root parasite that produces devastating effects on many crop legumes and has become a limiting factor for faba bean production in the Mediterranean region. The efficacy of available control methods is minimal and breeding for broomrape resistance remains the most promising method of contr...

journal_title：Genome

authors： Román B,Torres AM,Rubiales D,Cubero JI,Satovic Z

更新日期：2002-12-01 00:00:00

abstract：:cis-Elements CArG bound by serum response factor (SRF) are presently being intensively studied, but little is known about the substitution pattern of functional CArG elements. Here, we have performed the first evolutionary analysis of CArGome in the human and mouse genome through bioinformatic methods and statistical ...

journal_title：Genome

authors： Shen X,Mao H,Miao S

更新日期：2011-02-01 00:00:00

abstract：:We have characterized a so-called D genome specific repetitive DNA sequence (pAs1) of Aegilops squarrosa L. (2n = 14, genome DD) with respect to its DNA sequence and its distribution among Triticeae species. The clone consisted of three units of a repetitive DNA sequence of 336 or 337 base pairs, and was AT rich (65.2...

journal_title：Genome

authors： Nagaki K,Tsujimoto H,Isono K,Sasakuma T

更新日期：1995-06-01 00:00:00

abstract：:Genomic in situ hybridization (GISH) is one of the most popular and effective techniques for detecting alien chromatin introgressed into breeding lines; however, GISH analysis alone does not reveal the genetic identity of the alien chromosomes. We previously isolated a set of bacterial artificial chromosomes (BACs) sp...

journal_title：Genome

authors： Dong F,McGrath JM,Helgeson JP,Jiang J

更新日期：2001-08-01 00:00:00

abstract：:Rhubarb (official Da-huang) is an important medicinal herb in Asia. Many adulterants of official Da-huang have been discovered in Chinese markets in recent years, which has resulted in adverse effects in medicinal treatment. Here, novel molecular markers based on a short maturase K (matK) gene were developed for authe...

journal_title：Genome

authors： Xu G,Wang X,Liu C,Li W,Wei S,Liu Y,Cheng X,Liu J

更新日期：2013-02-01 00:00:00

abstract：:The Himalayan marmot (Marmota himalayana), a natural host and transmitter of plague, is also susceptible to the hepadnavirus infection. To reveal the genetic basis of the hepadnavirus susceptibility and the immune response to plague, we systematically characterized the features of immune genes in Himalayan marmot with...

journal_title：Genome

authors： Liu B,Bai L,Fu Y,Zhao S,Liu H,Wang R,Wang W,Li Y,Tao Y,Wang Z,Fan J,Liu E

更新日期：2020-06-01 00:00:00

abstract：:High-throughput sequencing (HTS) of DNA barcodes (metabarcoding), particularly when combined with standardized sampling protocols, is one of the most promising approaches for censusing overlooked cryptic invertebrate communities. We present biodiversity estimates based on sequencing of the cytochrome c oxidase subunit...

journal_title：Genome

authors： Al-Rshaidat MM,Snider A,Rosebraugh S,Devine AM,Devine TD,Plaisance L,Knowlton N,Leray M

更新日期：2016-09-01 00:00:00

abstract：:Eighteen low-copy and genomic microsatellite markers were tested for Mendelian inheritance and then assayed in 41 Pinus taeda L. samples drawn from five regions in the southern United States. The PCR products had multiple alleles, high levels of polymorphism, and little non-specific priming. Fifteen of the 18 markers ...

journal_title：Genome

authors： Elsik CG,Minihan VT,Hall SE,Scarpa AM,Williams CG

更新日期：2000-06-01 00:00:00

abstract：:A biochemical marker was utilized to facilitate detection of chromosome 1B, 1BL/1RS translocation heterozygote plants in segregating backcross progenies during the development of 1BL/1RS homozygous lines in several Triticum turgidum L. cultivars (2n = 4x = 28; AABB). Isoelectric focussing of glucose phosphate isomeras...

journal_title：Genome

authors： William MD,Mujeeb-Kazi A

更新日期：1993-12-01 00:00:00

abstract：:Sequence-based markers have added a new dimension in the efficiency of identifying alien introgressions in wheat. Expressed sequence tag-sequence tagged sites (EST-STS) markers have proved useful in tracing alien chromatin. In this study, we report the development of Thinopyrum bessarabicum- and Secale anatolicum-spec...

journal_title：Genome

authors： Singh AK,Lo K,Dong C,Zhang P,Trethowan RM,Sharp PJ

更新日期：2020-11-01 00:00:00

abstract：:Three long terminal repeat (LTR) sequences of Ty1-copia retrotransposons were identified in cucumber (Cucumis sativus L.) and named Tcs 1, Tcs 2, and Tcs 3. A sequence-specific amplification polymorphism (SSAP) marker system based on these LTR sequences displayed a higher level of polymorphism than AFLPs in cucumber. ...

journal_title：Genome

authors： Lou Q,Chen J

更新日期：2007-09-01 00:00:00

abstract：:Using the technique of random amplified polymorphic DNA (RAPD), we have identified 116 amplification products in Musa germplasm using nine primers. This has enabled us to identify RAPD markers that are specific to each of nine genotypes of Musa representing AA, AAA, AAB, ABB, and BB genomes. The pattern of variation o...

journal_title：Genome

authors： Howell EC,Newbury HJ,Swennen RL,Withers LA,Ford-Lloyd BV

更新日期：1994-04-01 00:00:00

abstract：:A novel y-type high molecular weight (HMW) glutenin subunit gene from the G genome of Triticum timopheevi (2n=4x=28, AAGG) was isolated and characterized. Genomic DNA from accession CWI17006 was amplified and a 2200 bp fragment was obtained. Sequence analysis revealed a complete open reading frame including N- and C-t...

journal_title：Genome

authors： Li X,Zhang Y,Gao L,Wang A,Ji K,He Z,Appels R,Ma W,Yan Y

更新日期：2007-12-01 00:00:00

abstract：:The SRY gene is a single-copy, male-specific gene, located on the Y chromosome in most mammals. However, recently we have described the presence of multiple polymorphic copies of this gene in both males and females of the vole species Microtus cabrerae. Here, we present the chromosomal localization of SRY gene copies ...

journal_title：Genome

authors： Fernández R,Barragán MJ,Bullejos M,Marchal JA,Martínez S,Díaz de la Guardia R,Sánchez A

更新日期：2002-06-01 00:00:00

abstract：:Orchidaceae, one of the largest families of angiosperms, is represented in India by 1600 species distributed in diverse habitats. Orchids are in high demand owing to their beautiful flowers and therapeutic properties. Overexploitation and habitat destruction have made many orchid species endangered. In the absence of ...

journal_title：Genome

authors： Parveen I,Singh HK,Malik S,Raghuvanshi S,Babbar SB

更新日期：2017-08-01 00:00:00

abstract：:Configurations of mitochondrial coxI and orfB gene regions were analysed by polymerase chain reaction (PCR) in three wild and one cultivated species of Raphanus. A total of 207 individual plants from 60 accessions were used. PCR with five combinations of primers identified five different amplification patterns both in...

journal_title：Genome

authors： Yamagishi H,Terachi T

更新日期：2003-02-01 00:00:00

abstract：:Vast differences exist in genome sizes of higher plants; however, gene count remains relatively constant among species. Differences observed in DNA content can be attributed to retroelement amplification leading to genome expansion. Cytological and genetic studies have demonstrated that genes are clustered in islands ...

journal_title：Genome

authors： Brooks SA,Huang L,Gill BS,Fellers JP

更新日期：2002-10-01 00:00:00

abstract：:Southern blots of restriction fragments of genomic DNAs from Hordeum vulgare (L.), H. bulbosum (L.), and interspecific hybrids and their derivatives were hybridized with rDNA probe to identify locus-specific modifications at Rrn loci. H. bulbosum rDNA revealed a single EcoRV site per repeat compared with two sites in ...

journal_title：Genome

authors： Kranthi Kumar P,Subrahmanyam NC

更新日期：1999-12-01 00:00:00

abstract：:Numerous quantitative trait loci (QTL) have been detected in Brassica species, but fine-mapping of major QTL has advanced slowly. The development of functional markers can overcome this barrier. We used publicly available PlantGDB-assembled unique transcripts (PUTs) from Brassica species to design 7836 functional simp...

journal_title：Genome

authors： An Z,Gao C,Li J,Fu D,Tang Z,Ortegón O

更新日期：2011-09-01 00:00:00