Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus).

abstract：:A high-density BAC filter of Triticum monococcum was screened for the presence of a centromeric retrotransposon using the integrase region as a probe. Southern hybridization to the BAC digests using total genomic DNA probes of Triticum monococcum, Triticum aestivum, and Hordeum vulgare detected differentially hybridiz...

journal_title：Genome

authors： Ito H,Nasuda S,Endo TR

更新日期：2004-08-01 00:00:00

abstract：:Septoria speckled leaf blotch (SSLB), caused by Septoria passerinii, is one of the most important foliar diseases of barley (Hordeum vulgare L.) in North America. The primary problem caused by this disease is substantial yield loss. The objective of this study was to determine the chromosomal location of SSLB resistan...

journal_title：Genome

authors： Yu GT,Franckowiak JD,Lee SH,Horsley RD,Neate SM

更新日期：2010-08-01 00:00:00

abstract：:The use of interspecific crosses in breeding is an important strategy in improving the genetic base of the modern cultivated potato, Solanum tuberosum L. Until now, it has normally been interspecific Solanum hybrids that have been morphologically and cytologically characterized. However, little is known about the geno...

journal_title：Genome

authors： Marfil CF,Masuelli RW,Davison J,Comai L

更新日期：2006-02-01 00:00:00

abstract：:Polycelis nigra is a free-living simultaneous hermaphroditic flatworm that has amphimictic and pseudogamous parthenogenetic biotypes. Sexual individuals are always diploid (2n = 16) and pseudogamous parthenogens are polyploid (usually triploid). Two types of supernumerary chromosomes are found in parthenogens, those r...

journal_title：Genome

authors： Sharbel TF,Beukeboom LW,Pijnacker LP

更新日期：1997-12-01 00:00:00

abstract：:Although little is known about the molecular organization of most genes within heterochromatin, the unusual properties of these chromosomal regions suggest that genes therein may be organized and expressed very differently from those in euchromatin. We report here the cloning, by P transposon tagging, of sequences ass...

journal_title：Genome

authors： Devlin RH,Holm DG,Morin KR,Honda BM

更新日期：1990-06-01 00:00:00

abstract：:Much effort has been directed at identifying sources of resistance to Fusarium head blight (FHB) in wheat. We sought to identify molecular markers for what we hypothesized was a new major FHB resistance locus originating from the wheat cultivar 'Freedom' and introgressed into the susceptible wheat cultivar 'USU-Apogee...

journal_title：Genome

authors： Garvin DF,Porter H,Blankenheim ZJ,Chao S,Dill-Macky R

更新日期：2015-11-01 00:00:00

abstract：:Using the Aegilops tauschii clone pAs1 together with the barley clone pHvG38 for two-colour fluorescence in situ hybridization (FISH) the entire chromosome complement of hexaploid wheat was identified. The combination of the two probes allowed easy discrimination of the three genomes of wheat. The banding pattern obta...

journal_title：Genome

authors： Pedersen C,Langridge P

更新日期：1997-10-01 00:00:00

abstract：:Red clover is an important forage legume species for temperate regions and very little is known about the genetic organization of its breeding populations. We used random amplified polymorphic DNA (RAPD) genetic markers to address the genetic diversity and the distribution of variation in 20 breeding populations and c...

journal_title：Genome

authors： Ulloa O,Ortega F,Campos H

更新日期：2003-08-01 00:00:00

abstract：:The molecular analyses of three of the regulatory genes (transformer (tra), doublesex (dsx), and transformer-2 (tra-2)) controlling sexual differentiation in Drosophila have demonstrated that the control of RNA processing has a major role in regulating somatic sexual differentiation. The activities of both the tra and...

journal_title：Genome

authors： Baker BS,Burtis K,Goralski T,Mattox W,Nagoshi R

更新日期：1989-01-01 00:00:00

abstract：:An Aegilops ventricosa Tausch (2n = 28, DvDvNvNv) subtelocentric chromosome added to wheat (Triticum aestivum L.) in a disomic addition line was found to carry the genes for resistance Yr17, Lr37, Sr38, and Cre5 already transferred onto chromosome 2AS of the wheat line VPM1. Previous works demonstrated that this Ae. v...

journal_title：Genome

authors： Tanguy AM,Coriton O,Abélard P,Dedryver F,Jahier J

更新日期：2005-06-01 00:00:00

abstract：:The abundance, genomic organization, species distribution, and structure of 33 distinct families of repetitive DNA in Phytophthora are described. The families were identified by screening a library of Phytophthora infestans DNA for repetitive sequences. These was subsequently characterized within 26 species distribute...

journal_title：Genome

authors： Judelson HS,Randall TA

更新日期：1998-08-01 00:00:00

abstract：:Quantitative trait locus (QTL) analysis was used to study the evolution of genes controlling the timing of flowering in four Brassica genomes that are all extensively replicated. Comparative mapping showed that a chromosomal region from the top of Arabidopsis thaliana chromosome 5 corresponded to three homoeologous co...

journal_title：Genome

authors： Axeisson T,Shavorskaya O,Lagercrantz U

更新日期：2001-10-01 00:00:00

abstract：:Quantitative trait loci (QTL) controlling traits associated with winterhardiness in barley (field survival, LT50, growth habit, and crown fructan content) were mapped to chromosome 7 in a population of 100 F1-derived doubled haploid lines. The largest QTL effects for all traits were detected in a 21% recombination int...

journal_title：Genome

authors： Hayes PM,Blake T,Chen TH,Tragoonrung S,Chen F,Pan A,Liu B

更新日期：1993-02-01 00:00:00

abstract：:The chromosome makeup of a 3-year-old crossbred heifer was examined in an attempt to explore the cytogenetic causes of her infertility. The heifer proved to be a mosaic carrying predominantly XY cells and with approximately 30% of cells lacking a normal Y. The minor population included cells carrying a dicentric isoch...

journal_title：Genome

authors： Pinheiro LE,Mikich AB,Bechara GH,Almeida IL,Basrur PK

更新日期：1990-10-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:The "rings" belonging to the genus Ypthima are amongst the most common butterflies in Peninsular Malaysia. However, the species can be difficult to tell apart, with keys relying on minor and often non-discrete ring characters found on the hindwing. Seven species have been reported from Peninsular Malaysia, but this is...

journal_title：Genome

authors： Jisming-See SW,Sing KW,Wilson JJ

更新日期：2016-10-01 00:00:00

abstract：:The ancestor of barley (Hordeum vulgare subsp. spontaneum) may be a source of novel alleles for crop improvement. We developed a set of recombinant chromosome substitution lines (RCSLs) using an accession of H. vulgare subsp. spontaneum (Caesarea 26-24, from Israel) as the donor and Hordeum vulgare subsp. vulgare 'Har...

journal_title：Genome

authors： Matus I,Corey A,Filichkin T,Hayes PM,Vales MI,Kling J,Riera-Lizarazu O,Sato K,Powell W,Waugh R

更新日期：2003-12-01 00:00:00

abstract：:Vast differences exist in genome sizes of higher plants; however, gene count remains relatively constant among species. Differences observed in DNA content can be attributed to retroelement amplification leading to genome expansion. Cytological and genetic studies have demonstrated that genes are clustered in islands ...

journal_title：Genome

authors： Brooks SA,Huang L,Gill BS,Fellers JP

更新日期：2002-10-01 00:00:00

abstract：:For molecular and cytogenetic studies, two partial bacterial artificial chromosome (BAC) libraries of the garlic cultivar Allium sativum L. 'Danyang' were constructed using high molecular weight (HMW) garlic DNA, the pBAC1-SACB1 vector, and the pIndigoBAC536 vector. The average insert size of the BAC library was about...

journal_title：Genome

authors： Lee HR,Eom EM,Lim YP,Bang JW,Lee DH

更新日期：2003-06-01 00:00:00

abstract：:Electron microscopic examination of gonads of Drosophila melanogaster with different genotypes, including a metafemale 3X;2A and an intersex XXY;3A have revealed that the formation of synaptonemal complexes is controlled by the genic balance, i.e., the ratio of X chromosomes to autosomes. The Y chromosome is not invol...

journal_title：Genome

authors： Grishayeva TM,Bogdanov YF

更新日期：1988-04-01 00:00:00

abstract：:Eighteen low-copy and genomic microsatellite markers were tested for Mendelian inheritance and then assayed in 41 Pinus taeda L. samples drawn from five regions in the southern United States. The PCR products had multiple alleles, high levels of polymorphism, and little non-specific priming. Fifteen of the 18 markers ...

journal_title：Genome

authors： Elsik CG,Minihan VT,Hall SE,Scarpa AM,Williams CG

更新日期：2000-06-01 00:00:00

abstract：:We are building a framework physical infrastructure across the soybean genome by using SSR (simple sequence repeat) and RFLP (restriction fragment length polymorphism) markers to identify BACs (bacterial artificial chromosomes) from two soybean BAC libraries. The libraries were prepared from two genotypes, each digest...

journal_title：Genome

authors： Marek LF,Mudge J,Darnielle L,Grant D,Hanson N,Paz M,Huihuang Y,Denny R,Larson K,Foster-Hartnett D,Cooper A,Danesh D,Larsen D,Schmidt T,Staggs R,Crow JA,Retzel E,Young ND,Shoemaker RC

更新日期：2001-08-01 00:00:00

abstract：:In the root meristem cells of the rice line AMR, which causes loss of heterozygosity in its hybrids, both normal and assortment mitoses were observed. During normal mitosis, chromosomes did not form homologous pairs at metaphase; all chromosomes lined up at the equatorial plate and 2 chromatids of each chromosome disj...

journal_title：Genome

authors： Wang RR,Li X,Chatterton NJ

更新日期：2006-05-01 00:00:00

abstract：:Barley yellow dwarf is the most damaging virus-caused disease in bread wheat (Triticum aestivum L.). A resistant line, SW335.1.2-13-11-1-5 (2n = 47), derived from a cross of T. aestivum x Lophopyrum ponticum was characterized by meiotic chromosome pairing, by in situ DNA hybridization and by expression of molecular ma...

journal_title：Genome

authors： Zhong GY,McGuire PE,Qualset CO,Dvorák J

更新日期：1994-10-01 00:00:00

abstract：:The genus Cichorium consists of two widely cultivated species C. intybus (chicory) and C. endivia (endive) and four wild species, C. bottae, C. spinosum, C. calvum, and C. pumilum. A multivariate and an UPGMA (unweighted pair group method average) analysis based on AFLP (amplified fragment length polymorphism) markers...

journal_title：Genome

authors： Kiers AM,Mes TH,van der Meijden R,Bachmann K

更新日期：2000-06-01 00:00:00

abstract：:Paenibacillus terrae NK3-4 is a plant growth-promoting rhizobacterium that may be useful for controlling plant diseases. We conducted a genomic analysis and identified the genes mediating antimicrobial functions. Additionally, an extracellular antifungal protein component was isolated and identified. The draft genome ...

journal_title：Genome

authors： Yu WQ,Zheng GP,Qiu W,Yan FC,Liu WZ,Liu WX

更新日期：2018-10-01 00:00:00

abstract：:As part of a project on lentil molecular genetics, the sequence of the 18S-25S ribosomal RNA gene intergenic spacer (IGS) of Lens culinaris Medik. was determined. DNA was cloned after polymerase chain reaction (PCR) amplification. The spacer of 2939 bp was composed of nonrepetitive sequences and four tandem arrays of ...

journal_title：Genome

authors： Fernández M,Polanco C,Ruiz ML,Pérez de la Vega M

更新日期：2000-08-01 00:00:00

abstract：:The timing and rate of genomic variation induced by allopolyploidization in the intergeneric wheat-rye (Triticum spp. - Secale cereale L.) hybrid triticale (x Triticosecale Wittmack) was studied using amplified fragment length polymorphism (AFLP) analyses with 2 sets of primers, EcoRI-MseI (E-M) and PstI-MseI (P-M), w...

journal_title：Genome

authors： Ma XF,Gustafson JP

更新日期：2006-08-01 00:00:00

abstract：:A DNA sequence, pOs6.20, was cloned from the nuclear genome of cultivated rice (Oryza sativa L.) by hybridization with a human minisatellite sequence. At high hybridization stringency, a subfragment of the rice sequence, pOs6.20.3, detected low-copy restriction fragment length polymorphisms (RFLPs), which behaved as M...

journal_title：Genome

authors： Dallas JF,McIntyre CL,Gustafson JP

更新日期：1993-06-01 00:00:00

abstract：:The NADH-specific and NAD(P)H-bispecific nitrate reductase genes from barley have been cloned and sequenced. To determine if the Nar7 locus encodes the NAD(P)H-bispecific nitrate reductase structural gene, a cross was made between a wild-type cultivar, Morex (Nar7 Nar7), and Az70 (nar7w nar7w), a mutant from the culti...

journal_title：Genome

authors： Warner RL,Kudrna DA,Kleinhofs A

更新日期：1995-08-01 00:00:00