Identification of the entire chromosome complement of bread wheat by two-colour FISH.

Abstract:

:Using the Aegilops tauschii clone pAs1 together with the barley clone pHvG38 for two-colour fluorescence in situ hybridization (FISH) the entire chromosome complement of hexaploid wheat was identified. The combination of the two probes allowed easy discrimination of the three genomes of wheat. The banding pattern obtained with the pHvG38 probe containing the GAA-satellite sequence was identical to the N-banding pattern of wheat. A detailed idiogram was constructed, including 73 GAA bands and 48 pAs1 bands. Identification of the wheat chromosomes by FISH will be particularly useful in connection with the physical mapping of other DNA sequences to chromosomes, or for chromosome identification in general, as an alternative to C-banding.

journal_name

Genome

journal_title

Genome

authors

Pedersen C,Langridge P

doi

10.1139/g97-077

subject

Has Abstract

pub_date

1997-10-01 00:00:00

pages

589-93

issue

5

eissn

0831-2796

issn

1480-3321

pii

g97-077

journal_volume

40

pub_type

杂志文章

相关文献

GENOME文献大全
  • Timing and rate of genome variation in triticale following allopolyploidization.

    abstract::The timing and rate of genomic variation induced by allopolyploidization in the intergeneric wheat-rye (Triticum spp. - Secale cereale L.) hybrid triticale (x Triticosecale Wittmack) was studied using amplified fragment length polymorphism (AFLP) analyses with 2 sets of primers, EcoRI-MseI (E-M) and PstI-MseI (P-M), w...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-078

    authors: Ma XF,Gustafson JP

    更新日期:2006-08-01 00:00:00

  • Development of soybean aphid genomic SSR markers using next generation sequencing.

    abstract::Simple sequence repeats (SSRs) or microsatellites are very useful molecular markers, owing to their locus-specific codominant and multiallelic nature, high abundance in the genome, and high rates of transferability across species. The soybean aphid (Aphis glycines Matsumura) has become the most damaging insect pest of...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g11-002

    authors: Jun TH,Michel AP,Mian MA

    更新日期:2011-05-01 00:00:00

  • Identification of wheat-barley translocations by sequential GISH and two-colour FISH in combination with the use of genetically mapped barley SSR markers.

    abstract::Five wheat-barley translocations in a wheat background were characterized through the combination of cytogenetic and molecular genetic approaches. The wheat chromosome segments involved in the translocations were identified using sequential GISH and two-colour FISH with the probes pSc119.2 and pAs1. The barley chromat...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-068

    authors: Nagy ED,Molnár-Láng M,Linc G,Láng L

    更新日期:2002-12-01 00:00:00

  • Comparative cytogenetic study on Trifolium subterraneum (2n = 16) and Trifolium israeliticum (2n = 12).

    abstract::Changes in chromosome number have played an important role in the evolution of the genus Trifolium. Along with a few species of polyploid origin there are several cases of dysploidy as evidenced by the presence of four basic chromosome numbers (x = 8, 7, 6, 5). Trifolium subterraneum and Trifolium israeliticum are rel...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2013-0055

    authors: Falistocco E,Marconi G,Falcinelli M

    更新日期:2013-06-01 00:00:00

  • Mapping the SRY gene in Microtus cabrerae: a vole species with multiple SRY copies in males and females.

    abstract::The SRY gene is a single-copy, male-specific gene, located on the Y chromosome in most mammals. However, recently we have described the presence of multiple polymorphic copies of this gene in both males and females of the vole species Microtus cabrerae. Here, we present the chromosomal localization of SRY gene copies ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-007

    authors: Fernández R,Barragán MJ,Bullejos M,Marchal JA,Martínez S,Díaz de la Guardia R,Sánchez A

    更新日期:2002-06-01 00:00:00

  • Ty1-copia-like retrotransposons of tomato (Lycopersicon esculentum Mill.).

    abstract::We have used a PCR and cloning strategy to identify Ty1-copia-like retrotransposons in tomato, Lycopersicon esculentum Mill. Using degenerate oligonucleotide primers corresponding to conserved domains of the Ty1-copia retrotransposon reverse transcriptase (RT), fragments of about 260 bp were obtained by PCR amplificat...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g00-056

    authors: Rogers SA,Pauls KP

    更新日期:2000-10-01 00:00:00

  • Differential susceptibility of a few members of the nasuta-albomicans complex of Drosophila to paraquat-induced lethality and oxidative stress.

    abstract::The evolution of karyotypically stabilized short-lived (SL) and long-lived (LL) cytoraces in the laboratory have been established and validated through our previous lifespan studies. In the present investigation, we examined the possible reason(s) for the differential longevity among selected members of SL and LL cyto...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g11-049

    authors: Ranjini MS,Hosamani R,Muralidhara,Ramachandra NB

    更新日期:2011-10-01 00:00:00

  • The HtrA2 Drosophila model of Parkinson's disease is suppressed by the pro-survival Bcl-2 Buffy.

    abstract::Mutations in High temperature requirement A2 (HtrA2), also designated PARK13, which lead to the loss of its protease activity, have been associated with Parkinson's disease (PD). HtrA2 is a mitochondrial protease that translocates to the cytosol upon the initiation of apoptosis where it participates in the abrogation ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0069

    authors: M'Angale PG,Staveley BE

    更新日期:2017-01-01 00:00:00

  • Can butterflies cope with city life? Butterfly diversity in a young megacity in southern China.

    abstract::During 30 years of unprecedented urbanization, plant diversity in Shenzhen, a young megacity in southern China, has increased dramatically. Although strongly associated with plant diversity, butterfly diversity generally declines with urbanization, but this has not been investigated in Shenzhen. Considering the speed ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0192

    authors: Sing KW,Dong H,Wang WZ,Wilson JJ

    更新日期:2016-09-01 00:00:00

  • 5S rDNA and U2 snRNA are linked in the genome of Crassostrea angulata and Crassostrea gigas oysters: does the (CT)n.(GA)n microsatellite stabilize this novel linkage of large tandem arrays?

    abstract::The 5S rRNA genes from 2 species of the Ostreidae family, Crassostrea angulata and Crassostrea gigas, were molecularly characterized. The genes were amplified, cloned, and sequenced. The results revealed a 5S rDNA tandem array with a nucleotide sequence in an inverted position within the nontranscribed spacer region t...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g05-075

    authors: Cross I,Rebordinos L

    更新日期:2005-12-01 00:00:00

  • User Centric Genomics Infrastructure: trends and technologies.

    abstract::Genomics is both data and compute intensive discipline. The success of genomics depends on adequate informatics infrastructure that can address growing data demands and enable a diverse range of resource-intensive computational activities. Designing a suitable Infrastructure is a challenging task, and its success larg...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2020-0096

    authors: Krishna R,Elisseev V

    更新日期:2020-11-20 00:00:00

  • Evaluating five different loci (rbcL, rpoB, rpoC1, matK, and ITS) for DNA barcoding of Indian orchids.

    abstract::Orchidaceae, one of the largest families of angiosperms, is represented in India by 1600 species distributed in diverse habitats. Orchids are in high demand owing to their beautiful flowers and therapeutic properties. Overexploitation and habitat destruction have made many orchid species endangered. In the absence of ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0215

    authors: Parveen I,Singh HK,Malik S,Raghuvanshi S,Babbar SB

    更新日期:2017-08-01 00:00:00

  • Low-copy microsatellite markers for Pinus taeda L.

    abstract::Eighteen low-copy and genomic microsatellite markers were tested for Mendelian inheritance and then assayed in 41 Pinus taeda L. samples drawn from five regions in the southern United States. The PCR products had multiple alleles, high levels of polymorphism, and little non-specific priming. Fifteen of the 18 markers ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Elsik CG,Minihan VT,Hall SE,Scarpa AM,Williams CG

    更新日期:2000-06-01 00:00:00

  • Development of RNA-seq-based molecular markers for characterizing Thinopyrum bessarabicum and Secale introgressions in wheat.

    abstract::Sequence-based markers have added a new dimension in the efficiency of identifying alien introgressions in wheat. Expressed sequence tag-sequence tagged sites (EST-STS) markers have proved useful in tracing alien chromatin. In this study, we report the development of Thinopyrum bessarabicum- and Secale anatolicum-spec...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2020-0057

    authors: Singh AK,Lo K,Dong C,Zhang P,Trethowan RM,Sharp PJ

    更新日期:2020-11-01 00:00:00

  • Chloroplast microsatellite polymorphisms in Vitis species.

    abstract::The use of consensus chloroplast microsatellites primers for dicotyledonous chloroplast genomes revealed the existence of intra and interspecific length variation within the genus Vitis. Three chloroplast microsatellite loci were found to be polymorphic in samples of Vitis vinifera, Vitis berlandieri, Vitis riparia, a...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-087

    authors: Arroyo-García R,Lefort F,de Andrés MT,Ibáñaez J,Borrego J,Jouve N,Cabello F,Martínez-Zapater JM

    更新日期:2002-12-01 00:00:00

  • Characterization of the hexaploid oat Avena byzantina cv. Kanota monosomic series using C-banding and RFLPs.

    abstract::The establishment of a C-banded karyotype of hexaploid oat (Avena spp., 2n = 6x = 42) has facilitated the cytological characterization of a monosomic series in 'Kanota', an A. byzantina (C. Koch) cultivar. The 'Kanota' series of monosomics analyzed in this study consists of only 12 of the 21 different chromosome-defic...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-126

    authors: Jellen EN,Rooney WL,Phillips RL,Rines HW

    更新日期:1993-10-01 00:00:00

  • Molecular differentiation of two sibling species of the black fly Simulium vittatum (Diptera: Simuliidae) based on random amplified polymorphic DNA.

    abstract::Larvae of the black fly morphospecies Simulium vittatum from Colorado, Montana, Nebraska, and New Hampshire were cytologically identified as either the IS-7 or the IIIL-1 cytospecies. DNA was PCR amplified from cytotyped larvae using eight 10-mer primers, labeled with 33P, and run on polyacrylamide gels. The entire da...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g03-144

    authors: Duncan GA,Adler PH,Pruess KP,Powers TO

    更新日期:2004-04-01 00:00:00

  • Disease-resistance related sequences in common bean.

    abstract::Primers based on a conserved nucleotide binding site (NBS) found in several cloned plant disease resistance genes were used to amplify DNA fragments from the genome of common bean (Phaseolus vulgaris). Cloning and sequence analysis of these fragments uncovered eight unique classes of disease-resistance related sequenc...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Rivkin MI,Vallejos CE,McClean PE

    更新日期:1999-02-01 00:00:00

  • Cytogenetic analysis of a self-fertilizing fish, Rivulus marmoratus: remarkable chromosomal constancy over a vast geographic range.

    abstract::The aplocheiloid killifish Rivulus marmoratus is the only known self-fertilizing hermaphroditic vertebrate. Most natural populations consist almost entirely of hermaphrodites and comprise arrays of homozygous clones. However, in almost all populations thus far studied, clonal variation, as detected with molecular tech...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g97-121

    authors: Sola L,Marzovillo M,Rossi AR,Gornung E,Bressanello S,Turner BJ

    更新日期:1997-12-01 00:00:00

  • Analysis of 106 kb of contiguous DNA sequence from the D genome of wheat reveals high gene density and a complex arrangement of genes related to disease resistance.

    abstract::Vast differences exist in genome sizes of higher plants; however, gene count remains relatively constant among species. Differences observed in DNA content can be attributed to retroelement amplification leading to genome expansion. Cytological and genetic studies have demonstrated that genes are clustered in islands ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-049

    authors: Brooks SA,Huang L,Gill BS,Fellers JP

    更新日期:2002-10-01 00:00:00

  • Characterization of a microsatellite in the promoter region of the IGF1 gene in domestic horses and other equids.

    abstract::Insulin-like growth factor 1 (IGF1) regulates growth and metabolic functions in vertebrates. A dinucleotide repeat sequence located at the promoter region of the IGF1 gene has been reported in several vertebrate species and may affect the control of the transcriptional activity of this gene. The genotypes of animals f...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Caetano AR,Bowling AT

    更新日期:1998-02-01 00:00:00

  • Karyotyping of Neurospora crassa using synaptonemal complex spreads of translocation quadrivalents.

    abstract::The purposes of the present research are (i) to establish the karyotype of Neursopora crassa using visualization of kinetochores in the synaptonemal complex (SC) spreads, (ii) to assign each chromosome to a linkage group, and (iii) to examine chromosome pairing and recombination nodules in quadrivalents. Two strains c...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-008

    authors: Lu BC

    更新日期:2006-06-01 00:00:00

  • Molecular evolution of ribosomal intergenic spacers in Odontophrynus americanus 2n and 4n (Amphibia: Anura).

    abstract::Ribosomal intergenic spacers (IGSs) of Odontophrynus americanus 2n and 4n were cloned, restriction mapped, and partially sequenced. Three distinct regions, namely alpha, beta, and delta, were identified in the IGSs. The alpha and beta regions flanked the 28S and 18S rRNA genes, respectively, conserving an identical re...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-134

    authors: Alvares LE,Polanco C,Brison O,Coutinho LL,Ruiz IR

    更新日期:2002-02-01 00:00:00

  • Fluorescent in situ hybridization with arbitrarily amplified DNA fragments differentiates carrot (Daucus carota L.) chromosomes.

    abstract::Carrot (Daucus carota L.) chromosomes are small and poorly differentiated in size and morphology. Here we demonstrate that fluorescent in situ hybridization (FISH) signals derived from arbitrary PCR probes can be used for chromosome identification in carrot. To prepare probes, we searched for nonpolymorphic products a...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g2012-003

    authors: Nowicka A,Grzebelus E,Grzebelus D

    更新日期:2012-03-01 00:00:00

  • Exploring phlebotomy technique as a pre-analytical factor in proteomic analyses by mass spectrometry.

    abstract::Multiple reaction monitoring mass spectrometry (MRM-MS) is an emerging technology for blood biomarker verification and validation; however, the results may be influenced by pre-analytical factors. This exploratory study was designed to determine if differences in phlebotomy techniques would significantly affect the ab...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0036

    authors: Penn AM,Lu L,Chambers AG,Balshaw RF,Morrison JL,Votova K,Wood E,Smith DS,Lesperance M,del Zoppo GJ,Borchers CH,SpecTRA Study Group.

    更新日期:2015-12-01 00:00:00

  • Tomato chromosome 6: effect of alien chromosomal segments on recombinant frequencies.

    abstract::Variation in recombinant frequencies at two adjacent intervals on chromosome 6 of tomato (Lycopersicon esculentum Mill.) has been studied in seven lines that differ in the amount and origin of introgressed segments from wild species. These lines were all crossed to a genotype homozygous recessive for the markers tl, y...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g96-062

    authors: Liharska T,Wordragen M,Kammen A,Zabel P,Koornneef M

    更新日期:1996-06-01 00:00:00

  • An AFLP marker tightly linked to apomixis reveals hemizygosity in a portion of the apomixis-controlling locus in Paspalum simplex.

    abstract::A mapping population of Paspalum simplex segregating for apomixis (asexual reproduction through seeds) was screened with AFLPs to find apomixis-linked markers. Four AFLPs linked to apomixis in coupling phase were found. Three of them did not show recombinants among the 87 individuals of the mapping population, whereas...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-014

    authors: Labombarda P,Busti A,Caceres ME,Pupilli F,Arcioni S

    更新日期:2002-06-01 00:00:00

  • A family study to examine clonal diversity in unisexual salamanders (genus Ambystoma).

    abstract::Unisexual Ambystoma are the oldest known unisexual vertebrates and comprise a lineage of eastern North American all female salamanders that reproduce by stealing sperm from as many as five normally bisexual congeneric species. The sperm may be used to only stimulate egg development by gynogenesis but can be incorporat...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2019-0034

    authors: Bogart JP

    更新日期:2019-08-01 00:00:00

  • DNA barcodes and citizen science provoke a diversity reappraisal for the "ring" butterflies of Peninsular Malaysia (Ypthima: Satyrinae: Nymphalidae: Lepidoptera).

    abstract::The "rings" belonging to the genus Ypthima are amongst the most common butterflies in Peninsular Malaysia. However, the species can be difficult to tell apart, with keys relying on minor and often non-discrete ring characters found on the hindwing. Seven species have been reported from Peninsular Malaysia, but this is...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0156

    authors: Jisming-See SW,Sing KW,Wilson JJ

    更新日期:2016-10-01 00:00:00

  • Genomic instability in Solanum tuberosum x Solanum kurtzianum interspecific hybrids.

    abstract::The use of interspecific crosses in breeding is an important strategy in improving the genetic base of the modern cultivated potato, Solanum tuberosum L. Until now, it has normally been interspecific Solanum hybrids that have been morphologically and cytologically characterized. However, little is known about the geno...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g05-088

    authors: Marfil CF,Masuelli RW,Davison J,Comai L

    更新日期:2006-02-01 00:00:00