Draft genome sequence, disease-resistance genes, and phenotype of a Paenibacillus terrae strain (NK3-4) with the potential to control plant diseases.

abstract：:Mitochondrial (mt) genome sequences of insects are receiving renewed attention in molecular phylogentic studies, studies of mt-genome rearrangement, and other unusual molecular phenomena, such as translational frameshifting. At present, the basal neopteran lineages are poorly represented by mt-genome sequences. Comple...

journal_title：Genome

authors： Stewart JB,Beckenbach AT

更新日期：2006-07-01 00:00:00

abstract：:Twelve genes encoding two closely related subtypes (ST1.1a and ST1.1b) of a sulphate transporter have been identified in the diploid wheats Aegilops tauschii, Triticum urartu, and Aegilops speltoides, as well as the hexaploid Triticum aestivum. Based on phylogenetic comparisons with other plant sulphate transporters, ...

journal_title：Genome

authors： Buchner P,Prosser IM,Hawkesford MJ

更新日期：2004-06-01 00:00:00

abstract：:The spectral karyotyping procedure of in situ hybridization with chromosome-specific probes assigns a unique colour code to each of the 21 mouse mitotic chromosomes. We have adapted this procedure to meiotic prophase chromosomes, and the results show that each of the pachytene or metaphase I bivalents can be identifie...

journal_title：Genome

authors： Heng HH,Liu G,Lu W,Bremer S,Ye CJ,Hughes M,Moens P

更新日期：2001-04-01 00:00:00

abstract：:Eighteen accessions of a diploid wild peanut species (Arachis duranensis) were analyzed using morphological, intercrossing, cytological, and RFLP data. Abundant variation was found for morphological characters and for RFLP patterns both between and within accessions, and each accession could be uniquely identified by ...

journal_title：Genome

authors： Stalker HT,Dhesi JS,Kochert G

更新日期：1995-12-01 00:00:00

abstract：:Genetic parameters were estimated on growth and development traits using analyses of variance and covariance of 42 full-sib families from a select line, 39 full-sib families from a control line of the same strain, and 37 full-sib families from another unselected strain. The traits included percent 1+ smolts, percent s...

journal_title：Genome

authors： O'Flynn FM,Friars GW,Bailey JK,Terhune JM

更新日期：1992-04-01 00:00:00

abstract：:Light-harvesting-like (LIL) proteins are low-molecular-mass membrane proteins related to the light-harvesting complexes, which form the dominant antenna system in most photosynthetic eukaryotes. To analyze the LIL protein family, we mined a number of publicly available databases to identify members of this family in a...

journal_title：Genome

authors： Neilson JA,Durnford DG

更新日期：2010-01-01 00:00:00

abstract：:To investigate the effect of signal molecules and their receptor-associated genes on rat liver regeneration (LR) at the transcriptional level, the associated genes were originally obtained by retrieving the databases and related scientific publications; their expression profiles in rat LR were then checked using the R...

journal_title：Genome

authors： Xu CS,Shao HY,Du B

更新日期：2009-06-01 00:00:00

abstract：:Stenotrophomonas maltophilia is a global multidrug-resistant human opportunistic pathogen in clinical environments. Stenotrophomonas maltophilia is also ubiquitous in aqueous environments, soil, and plants. Various molecular typing methods have revealed that S. maltophilia exhibits high levels of phenotypic and genoty...

journal_title：Genome

authors： Yu D,Yin Z,Li B,Jin Y,Ren H,Zhou J,Zhou W,Liang L,Yue J

更新日期：2016-12-01 00:00:00

abstract：:Three wheat sequences, shown to be homologous to pollen allergen encoding, DNA replication regulating, and DNA (cytosine-5)-methyltransferase genes were localized on chromosomes using nullisomic-tetrasomic wheat ('Chinese Spring') and wheat-rye ('Chinese Spring'/'Imperial') addition lines. Whereas the loci for the pol...

journal_title：Genome

authors： Korzun V,Balzer HJ,Balzer A,Bäumlein H,Börner A

更新日期：1996-12-01 00:00:00

abstract：:Genomic in situ hybridization (GISH) is one of the most popular and effective techniques for detecting alien chromatin introgressed into breeding lines; however, GISH analysis alone does not reveal the genetic identity of the alien chromosomes. We previously isolated a set of bacterial artificial chromosomes (BACs) sp...

journal_title：Genome

authors： Dong F,McGrath JM,Helgeson JP,Jiang J

更新日期：2001-08-01 00:00:00

abstract：:The most important rhizomania-resistance gene in sugar beet is the Rz1 gene from the Holly Sugar Company in California, the source widely used to breed partially resistant varieties. Other important gene sources are WB41 and WB42, which both originate from Beta vulgaris subsp. maritima collected in Denmark, and which ...

journal_title：Genome

authors： Gidner S,Lennefors BL,Nilsson NO,Bensefelt J,Johansson E,Gyllenspetz U,Kraft T

更新日期：2005-04-01 00:00:00

abstract：:Aneuploidy has previously been observed in the Pacific oyster, Crassostrea gigas, and shown to be negatively correlated with growth. Moreover, a significant impact of atrazine exposure has been described in C. gigas, and persistence of that effect has been observed between generations. Evidence of differential chromos...

journal_title：Genome

authors： Bouilly K,Leitão A,Chaves R,Guedes-Pinto H,Boudry P,Lapègue S

更新日期：2005-02-01 00:00:00

abstract：:The length variability of the nontranscribed spacer (NTS) of the 5S rDNA repeats was analyzed in species of the genus Lens by means of PCR amplification. The NTS ranged from approximately 227 to approximately 952 bp. The polymorphism detected was higher than previous NTS polymorphisms described in this genus. Three NT...

journal_title：Genome

authors： Fernández M,Ruiz ML,Linares C,Fominaya A,Pérez de la Vega M

更新日期：2005-10-01 00:00:00

abstract：:Numerous quantitative trait loci (QTL) have been detected in Brassica species, but fine-mapping of major QTL has advanced slowly. The development of functional markers can overcome this barrier. We used publicly available PlantGDB-assembled unique transcripts (PUTs) from Brassica species to design 7836 functional simp...

journal_title：Genome

authors： An Z,Gao C,Li J,Fu D,Tang Z,Ortegón O

更新日期：2011-09-01 00:00:00

abstract：:The genetic control of adult plant resistance to Stagonospora nodorum blotch (SNB) is complex, consisting of genes with minor effects interacting in an additive manner. Earlier studies detected quantitative trait loci (QTL) for flag leaf resistance in successive years on chromosomes 1B, 2A, 2D, and 5B using SSR- and D...

journal_title：Genome

authors： Francki MG,Walker E,Li DA,Forrest K

更新日期：2018-02-01 00:00:00

abstract：:Doubled haploid (DH) lines together with a cotyledon bioassay were employed for the molecular analysis of resistance to the blackleg fungus Leptosphaeria maculans in the Australian Brassica napus cultivars Shiralee and Maluka. We used bulked segregant analysis to identify 13 RAPD and two RFLP markers linked to the res...

journal_title：Genome

authors： Mayerhofer R,Good AG,Bansal VK,Thiagarajah MR,Stringam GR

更新日期：1997-06-01 00:00:00

abstract：:In an initial investigation of differential expression of genes caused by cis-acting regulatory elements in rice, the lack of reproducibility led us to question the basic premise of allelic expression imbalance determination: namely that departures of cDNA expression ratios from those observed in genomic DNA provide u...

journal_title：Genome

authors： Akkinepalli H,Ereful N,Liu Y,Malabanan K,Howells R,Stamati K,Powell W,Leung H,Greenland A,Mackay I,Lee D

更新日期：2012-05-01 00:00:00

abstract：:Intermediate wheatgrass (Thinopyrum intermedium (Host) Barkworth & D.R. Dewey), a segmental autoallohexaploid (2n = 6x = 42), is not only an important forage crop but also a valuable gene reservoir for wheat (Triticum aestivum L.) improvement. Throughout the scientific literature, there continues to be disagreement as...

journal_title：Genome

authors： Wang RR,Larson SR,Jensen KB,Bushman BS,DeHaan LR,Wang S,Yan X

更新日期：2015-02-01 00:00:00

abstract：:Bacteria are essential components of natural environments. They contribute to ecosystem functioning through roles as mutualists and pathogens for larger species, and as key components of food webs and nutrient cycles. Bacterial communities respond to environmental disturbances, and the tracking of these communities ac...

journal_title：Genome

authors： Farrell MJ,Govender D,Hajibabaei M,van der Bank M,Davies TJ

更新日期：2019-03-01 00:00:00

abstract：:Most information about the molecular biology of phaseolin, the major seed storage protein in Phaseolus vulgaris, has been obtained from the T-type phaseolin, which is characteristic of the Andean gene pool of the species. In the work reported here, two cDNA clones for the S-type phaseolin representing the other major,...

journal_title：Genome

authors： Kami JA,Gepts P

更新日期：1994-10-01 00:00:00

abstract：:The family Pinaceae is made up mostly of diploid species (2n = 24). Systematization of karyotype analysis was developed to make comparison of intra- and interspecific karyotypes among the Pinaceae more accurate and reliable. Considering all parameters, the genera Pseudotsuga and Pseudolarix have the "most derived" (or...

journal_title：Genome

authors： Nkongolo KK,Mehes-Smith M

更新日期：2012-11-01 00:00:00

abstract：:Meiosis was studied in two diploid (2n = 2x = 24) siblings of Solanum phureja Juz. et Buk. and in 11 disomic and 2 trisomic descendants. The diploid siblings carry the same heterozygous interchange and either one or two inversions. The frequency of quadrivalents at diakinesis/metaphase I in these clones was 0.56 and 0...

journal_title：Genome

authors： Wagenvoort M

更新日期：1995-02-01 00:00:00

abstract：:In the silkworm Bombyx mori, non-susceptibility to the Zhenjiang (China) strain of the densonucleosis virus (DNV-Z) is controlled by the recessive gene nsd-Z (non-susceptible to DNV-Z), which is located on chromosome 15. Owing to a lack of crossing over in females, reciprocal backcrossed F1 (BC1) progeny were used for...

journal_title：Genome

authors： Li M,Guo Q,Hou C,Miao X,Xu A,Guo X,Huang Y

更新日期：2006-04-01 00:00:00

abstract：:Vast differences exist in genome sizes of higher plants; however, gene count remains relatively constant among species. Differences observed in DNA content can be attributed to retroelement amplification leading to genome expansion. Cytological and genetic studies have demonstrated that genes are clustered in islands ...

journal_title：Genome

authors： Brooks SA,Huang L,Gill BS,Fellers JP

更新日期：2002-10-01 00:00:00

abstract：:The genomic origin of alien chromosomes present in a wheat-Thinopyrum intermedium partial amphiploid TAF46 (2n = 8x = 56) and six derived chromosome addition lines were analyzed by genomic in situ hybridization (GISH) using S genomic DNA from Pseudoroegneria strigosa (2n = 2x = 14, SS) as a probe. The GISH analysis cl...

journal_title：Genome

authors： Chen Q,Conner RL,Laroche A,Ji WQ,Armstrong KC,Fedak G

更新日期：1999-12-01 00:00:00

abstract：:MicroRNAs (miRNAs) repress target genes at the post-transcriptional level and play important roles in development and cell lineage decisions. In vertebrates, however, both the targets of miRNAs and their expression profiles during development are poorly understood. Thus far, 326 human miRNAs, 249 mouse miRNAs, and 195...

journal_title：Genome

authors： Kim HJ,Cui XS,Kim EJ,Kim WJ,Kim NH

更新日期：2006-10-01 00:00:00

abstract：:The wild olive distribution extends from the Mediterranean region to south Asia and Austral Africa. The species is also invasive, particularly in Australia. Here, we investigated the sequence variation at five nuclear single-copy genes in 41 native and invasive accessions of the Mediterranean and African olive subspec...

journal_title：Genome

authors： Besnard G,El Bakkali A

更新日期：2014-03-01 00:00:00

abstract：:Large sequence insertion (LSI) is one of the structural variations (SVs) that may cause phenotypic differences in plants. To identify the LSIs using medium-coverage sequencing data of four wild soybean (Glycine soja) genotypes, we designed a hybrid approach combining de novo assembly and read mapping. Total reads and ...

journal_title：Genome

authors： Lee T,Kim MY,Ha J,Lee SH

更新日期：2018-10-01 00:00:00

abstract：:Genetic diversity in 20 elite blackgram (Vigna mungo (L.) Hepper) genotypes was studied using microsatellite and AFLP markers. Thirty-six microsatellite markers from azuki bean (Vigna angularis (Willd.) Ohwi & Ohashi) were successfully amplified across the 20 blackgram genotypes and 33 microsatellite markers showed po...

journal_title：Genome

authors： Gupta SK,Gopalakrishna T

更新日期：2009-02-01 00:00:00

abstract：:The 5S rRNA genes in the Camellia sinensis (L.) O. Kuntze (tea) genome are arranged as tandem repeat units of 300 and 325 bps. The 2 classes of tandem repeats were discovered by Southern hybridisation of tea genomic DNA with a 5S rRNA gene PCR product. ...

journal_title：Genome

authors： Singh D,Singh M

更新日期：2001-02-01 00:00:00