Detection of large sequence insertions by a hybrid approach that combine de novo assembly and resequencing of medium-coverage genome sequences.

abstract：:Primers based on a conserved nucleotide binding site (NBS) found in several cloned plant disease resistance genes were used to amplify DNA fragments from the genome of common bean (Phaseolus vulgaris). Cloning and sequence analysis of these fragments uncovered eight unique classes of disease-resistance related sequenc...

journal_title：Genome

authors： Rivkin MI,Vallejos CE,McClean PE

更新日期：1999-02-01 00:00:00

abstract：:DNA gel-blot and in situ hybridization with genome-specific repeated sequences have proven to be valuable tools in analyzing genome structure and relationships in species with complex allopolyploid genomes such as hexaploid oat (Avena sativa L., 2n = 6x = 42; AACCDD genome). In this report, we describe a systematic ap...

journal_title：Genome

authors： Ananiev EV,Vales MI,Phillips RL,Rines HW

更新日期：2002-04-01 00:00:00

abstract：:The 5S rRNA genes in the Camellia sinensis (L.) O. Kuntze (tea) genome are arranged as tandem repeat units of 300 and 325 bps. The 2 classes of tandem repeats were discovered by Southern hybridisation of tea genomic DNA with a 5S rRNA gene PCR product. ...

journal_title：Genome

authors： Singh D,Singh M

更新日期：2001-02-01 00:00:00

abstract：:In this study we sequenced and analysed the complete mitochondrial (mt) genome of the Chilean predatory mite Phytoseiulus persimilis Athias-Henriot (Chelicerata: Acari: Mesostigmata: Phytoseiidae: Amblyseiinae). The 16 199 bp genome (79.8% AT) contains the standard set of 13 protein-coding and 24 RNA genes. Compared w...

journal_title：Genome

authors： Dermauw W,Vanholme B,Tirry L,Van Leeuwen T

更新日期：2010-04-01 00:00:00

abstract：:The isolation, physical, and genetic mapping of a group of wheat genes expressed in infected heads of Triticum aestivum 'Frontana' resistant to Fusarium head blight is reported. A cDNA library was built from heads of 'Frontana' through suppressive subtractive hybridization, to enrich for sequences induced by the patho...

journal_title：Genome

authors： Han FP,Fedak G,Ouellet T,Dan H,Somers DJ

更新日期：2005-02-01 00:00:00

abstract：:The molecular characterization of C-banded regions of Secale montanum Guss. by means of in situ hybridization was performed in order to provide new information about their chromosome structure relative to cultivated rye, Secale cereale L. Accurate identification of individual chromosomes was achieved using simultaneou...

journal_title：Genome

authors： Cuadrado A,Jouve N

更新日期：1995-08-01 00:00:00

abstract：:The aplocheiloid killifish Rivulus marmoratus is the only known self-fertilizing hermaphroditic vertebrate. Most natural populations consist almost entirely of hermaphrodites and comprise arrays of homozygous clones. However, in almost all populations thus far studied, clonal variation, as detected with molecular tech...

journal_title：Genome

authors： Sola L,Marzovillo M,Rossi AR,Gornung E,Bressanello S,Turner BJ

更新日期：1997-12-01 00:00:00

abstract：:A new repetitive sequence that is extremely abundant and well dispersed in the Thinopyrum elongatum genome but present in low-copy number in wheat (Triticum aestivum L.) has been isolated. This repeat and a Th. elongatum repeat isolated in another laboratory were used to identify cosmid genomic clones containing the r...

journal_title：Genome

authors： Bournival B,Obanni M,Abad A,Ohm H,Mackenzie S

更新日期：1994-02-01 00:00:00

abstract：:Rhubarb (official Da-huang) is an important medicinal herb in Asia. Many adulterants of official Da-huang have been discovered in Chinese markets in recent years, which has resulted in adverse effects in medicinal treatment. Here, novel molecular markers based on a short maturase K (matK) gene were developed for authe...

journal_title：Genome

authors： Xu G,Wang X,Liu C,Li W,Wei S,Liu Y,Cheng X,Liu J

更新日期：2013-02-01 00:00:00

abstract：:Both meiosis-specific and general recombination functions, recruited from the mitotic cell cycle, are required for elevated levels of recombination and for chromosome synapsis (assembly of the synaptonemal complex) during yeast meiosis. The meiosis-specific SPO11 gene (previously shown to be required for meiotic recom...

journal_title：Genome

authors： Giroux CN,Dresser ME,Tiano HF

更新日期：1989-01-01 00:00:00

abstract：:Knowledge of the locations of repeat elements could be very important in the assembly of genome sequences and their assignment to physical chromosomes. Genomic and species relationships among 16 species were investigated using fluorescence in situ hybridization (FISH) with the Am1 and (ACT)6 probes. The Am1 oligonucle...

journal_title：Genome

authors： Luo X,Tinker NA,Zhou Y,Wight CP,Liu J,Wan W,Chen L,Peng Y

更新日期：2018-01-01 00:00:00

abstract：:Ginkgo biloba L. (known as ginkgo or maidenhair tree) is a phylogenetically isolated, charismatic, gymnosperm tree. Herbal dietary supplements, prepared from G. biloba leaves, are consumed to boost cognitive capacity via improved blood perfusion and mitochondrial function. A novel DNA mini-barcode assay was designed a...

journal_title：Genome

authors： Little DP

更新日期：2014-09-01 00:00:00

abstract：:Anther development in angiosperms culminates in the programmed cell death of specific tissues to facilitate the release of pollen. Despite a wealth of morphological descriptions of this process, there have been few reports on the regulation of dehiscence or the coordination of events between tissues. We have cloned an...

journal_title：Genome

authors： Riggs CD,Zeman K,Deguzman R,Rzepczyk A,Taylor AA

更新日期：2001-08-01 00:00:00

abstract：:Twelve genes encoding two closely related subtypes (ST1.1a and ST1.1b) of a sulphate transporter have been identified in the diploid wheats Aegilops tauschii, Triticum urartu, and Aegilops speltoides, as well as the hexaploid Triticum aestivum. Based on phylogenetic comparisons with other plant sulphate transporters, ...

journal_title：Genome

authors： Buchner P,Prosser IM,Hawkesford MJ

更新日期：2004-06-01 00:00:00

abstract：:The results of the development of oil palm (Elaeis guineensis Jacq.) microsatellite markers are given step by step, from the screening of libraries enriched in (GA)n, (GT)n, and (CCG)n simple-sequence repeats (SSRs) to the final characterisation of 21 SSR loci. Also published are primer sequences, estimates of allele ...

journal_title：Genome

authors： Billotte N,Risterucci AM,Barcelos E,Noyer JL,Amblard P,Baurens FC

更新日期：2001-06-01 00:00:00

abstract：:We sequenced the complete mitochondrial (mt) genome of Camponotus atrox (Hymenoptera: Formicidae), which is only distributed in Korea. The genome was 16 540 bp in size and contained typical sets of genes (13 protein-coding genes, 22 tRNAs, and 2 rRNAs). The C. atrox A+T-rich region, at 1402 bp, was the longest of all ...

journal_title：Genome

authors： Kim MJ,Hong EJ,Kim I

更新日期：2016-01-01 00:00:00

abstract：:Stenotrophomonas maltophilia is a global multidrug-resistant human opportunistic pathogen in clinical environments. Stenotrophomonas maltophilia is also ubiquitous in aqueous environments, soil, and plants. Various molecular typing methods have revealed that S. maltophilia exhibits high levels of phenotypic and genoty...

journal_title：Genome

authors： Yu D,Yin Z,Li B,Jin Y,Ren H,Zhou J,Zhou W,Liang L,Yue J

更新日期：2016-12-01 00:00:00

abstract：:A single cross between two clones of passion fruit (Passiflora edulis Sims. f. flavicarpa Deg., 2n = 18) was selected for genetic mapping. The mapping population was composed of 90 F1 plants derived from a cross between 'IAPAR 123' (female parent) and 'IAPAR 06' (male parent). A total of 380 RAPD primers were analyzed...

journal_title：Genome

authors： Carneiro MS,Camargo LE,Coelho AS,Vencovsky R,Rui PL,Stenzel NM,Vieira ML

更新日期：2002-08-01 00:00:00

abstract：:Knowledge of the inheritance of C-glycosyl flavone synthesis in maize (Zea mays L.) silk tissues has been acquired through detailed genetic studies involving primarily germplasm from the Corn Belt Dent race. To test the robustness of this genetic knowledge, we examined C-glycosyl flavone synthesis in a genetically dis...

journal_title：Genome

authors： Lee EA,Staebler JM,Grainger C,Snook ME

更新日期：2009-01-01 00:00:00

abstract：:Barley yellow dwarf is the most damaging virus-caused disease in bread wheat (Triticum aestivum L.). A resistant line, SW335.1.2-13-11-1-5 (2n = 47), derived from a cross of T. aestivum x Lophopyrum ponticum was characterized by meiotic chromosome pairing, by in situ DNA hybridization and by expression of molecular ma...

journal_title：Genome

authors： Zhong GY,McGuire PE,Qualset CO,Dvorák J

更新日期：1994-10-01 00:00:00

abstract：:Visual quality of field pea (Pisum sativum L.) is one of the most important determinants of the market value of the harvested crop. Seed coat color, seed shape, and seed dimpling are the major components of visual seed quality of field pea and are considered as important breeding objectives. The objectives of this res...

journal_title：Genome

authors： Ubayasena L,Bett K,Tar'an B,Warkentin T

更新日期：2011-04-01 00:00:00

abstract：:Mutability of the w4 flower color locus in soybean, Glycine max (L.) Merr., is conditioned by an allele designated w4-m. Germinal revertants recovered among self-pollinated progeny of mutable plants have been associated with the generation of necrotic root mutations, chlorophyll-deficiency mutations, and sterility mut...

journal_title：Genome

authors： Palmer RG,Zhang L,Huang Z,Xu M

更新日期：2008-04-01 00:00:00

abstract：:The family Pinaceae is made up mostly of diploid species (2n = 24). Systematization of karyotype analysis was developed to make comparison of intra- and interspecific karyotypes among the Pinaceae more accurate and reliable. Considering all parameters, the genera Pseudotsuga and Pseudolarix have the "most derived" (or...

journal_title：Genome

authors： Nkongolo KK,Mehes-Smith M

更新日期：2012-11-01 00:00:00

abstract：:Two periods of the development of genetic research in the USSR with reference to its current trends of plant and animal genetics, cytogenetics, and molecular genetics are reviewed. A short list of priority areas is established: the maintenance and use of unique gene pools of plants and animals; the domestication of an...

journal_title：Genome

authors： Shumny VK

更新日期：1989-01-01 00:00:00

abstract：:The genus Cichorium consists of two widely cultivated species C. intybus (chicory) and C. endivia (endive) and four wild species, C. bottae, C. spinosum, C. calvum, and C. pumilum. A multivariate and an UPGMA (unweighted pair group method average) analysis based on AFLP (amplified fragment length polymorphism) markers...

journal_title：Genome

authors： Kiers AM,Mes TH,van der Meijden R,Bachmann K

更新日期：2000-06-01 00:00:00

abstract：:Lycopersicon esculentum (tomato) has a small genome (2C = 1.90 pg of DNA) packaged in 2n = 2x = 24 small acrocentric to metacentric chromosomes. Like the chromosomes of other members of the family Solanaceae, tomato chromosomes have pericentromeric heterochromatin. To determine the fraction of the tomato genome found ...

journal_title：Genome

authors： Peterson DG,Stack SM,Price HJ,Johnston JS

更新日期：1996-02-01 00:00:00

abstract：:Two nuclear genes, vitality (Vi) on an A- or B-genome chromosome and species cytoplasm specific (scs) on a 1DL telosome from Triticum aestivum L. or a telosome from Aegilops uniaristata Vis. (un telosome), improved compatibility between the nucleus of Triticum turgidum L. var. durum and the cytoplasm of Ae. longissima...

journal_title：Genome

authors： Maan SS

更新日期：1994-04-01 00:00:00

abstract：:A major locus conferring resistance to the causal organism of powdery mildew, Erysiphe polygoni DC, in mungbean (Vigna radiata L. Wilczek) was identified using QTL analysis with a population of 147 recombinant inbred individuals. The population was derived from a cross between 'Berken', a highly susceptible variety, a...

journal_title：Genome

authors： Humphry ME,Magner T,McIntyre CL,Aitken EA,Liu CJ

更新日期：2003-10-01 00:00:00

abstract：:Conceptual aspects of estimation of genetic components of variance and covariance under selection are discussed, with special attention to likelihood methods. Certain selection processes are described and alternative likelihoods that can be used for analysis are specified. There is a mathematical relationship between ...

journal_title：Genome

authors： Gianola D,Fernando RL,Im S,Foulley JL

更新日期：1989-01-01 00:00:00

abstract：:Microsatellites have many desirable marker properties and have been increasingly used in crop plants in genetic diversity studies. Here we report on the characterisation of microsatellite markers and on their use for the determination of genetic identities and the assessment of genetic variability among accessions fro...

journal_title：Genome

authors： Jakse J,Kindlhofer K,Javornik B

更新日期：2001-10-01 00:00:00