Allelism and molecular mapping of soybean necrotic root mutants.

Abstract:

:Mutability of the w4 flower color locus in soybean, Glycine max (L.) Merr., is conditioned by an allele designated w4-m. Germinal revertants recovered among self-pollinated progeny of mutable plants have been associated with the generation of necrotic root mutations, chlorophyll-deficiency mutations, and sterility mutations. A total of 24 necrotic root mutant lines were generated from a total of 24 independent reversion events at the w4-m locus. The initial mutable population included 4 mutable categories for w4-m, designated (1) low frequency of early excisions, (2) low frequency of late excisions, (3) high frequency of early excisions, and (4) high frequency of late excisions. These mutable categories were based upon flower phenotype, i.e., somatic tissue. A total of 22 of 24 necrotic root mutations occurred from germinal reversions classified in the high frequency of excision categories. Of these 22 mutants, 14 came from early excisions and 8 came from late excisions. These necrotic root mutants were allelic to 6 previously identified necrotic root mutants derived from the study of germinal revertants, i.e., gene tagging studies, chemical mutagenesis, and "spontaneous" occurrences from genetic crosses. Thus, all 30 necrotic root mutants in soybean are allelic. An F2 mapping population from the cross of Minsoy (Rn1 Rn1) x T328 (rn1 rn1) was used to map the Rn1 locus using simple sequence repeat (SSR) markers. The Rn1 locus was located between Satt288 and Satt612 on molecular linkage group G.

journal_name

Genome

journal_title

Genome

authors

Palmer RG,Zhang L,Huang Z,Xu M

doi

10.1139/G08-001

subject

Has Abstract

pub_date

2008-04-01 00:00:00

pages

243-50

issue

4

eissn

0831-2796

issn

1480-3321

pii

g08-001

journal_volume

51

pub_type

杂志文章

相关文献

GENOME文献大全
  • Post-glacial recolonization of insular Newfoundland across the Strait of Belle Isle gave rise to an endemic subspecies of woodland caribou, Rangifer tarandus terranovae (Bangs, 1896): evidence from mtDNA haplotypes.

    abstract::Post-glacial origins of woodland caribou (Rangifer tarandus subsp.) on the island of Newfoundland and their relationship to mainland populations have been uncertain. Sequence analysis of 2223 bp of the mitochondrial DNA control region and cytochrome b gene from 233 Newfoundland caribou identified 32 haplotypes in four...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2017-0199

    authors: Wilkerson CD,Mahoney SP,Carr SM

    更新日期:2018-08-01 00:00:00

  • The Bo1-specific PCR marker AWW5L7 is predictive of boron tolerance status in a range of exotic durum and bread wheats.

    abstract::High soil boron (B) constitutes a major soil problem in many parts of the world, particularly in low-rainfall areas and land under irrigation. Low accumulation of B in the shoot or grain of cereal crops is correlated with the maintenance of biomass production and grain yield under high B conditions, suggesting that th...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/G08-084

    authors: Schnurbusch T,Langridge P,Sutton T

    更新日期:2008-12-01 00:00:00

  • Analysis of ESTs from multiple Gossypium hirsutum tissues and identification of SSRs.

    abstract::In an effort to expand the Gossypium hirsutum L. (cotton) expressed sequence tag (EST) database, ESTs representing a variety of tissues and treatments were sequenced. Assembly of these sequences with ESTs already in the EST database (dbEST, GenBank) identified 9675 cotton sequences not present in GenBank. Statistical ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g05-115

    authors: Taliercio E,Allen RD,Essenberg M,Klueva N,Nguyen H,Patil MA,Payton P,Millena AC,Phillips AL,Pierce ML,Scheffler B,Turley R,Wang J,Zhang D,Scheffler J

    更新日期:2006-04-01 00:00:00

  • RAPD markers as predictors of infectious hypodermal and hematopoietic necrosis virus (IHHNV) resistance in shrimp (Litopenaeus stylirostris).

    abstract::Random amplified polymorphic DNA (RAPD) fingerprints of two shrimp populations (Litopenaeus stylirostris) were compared to find genetic marker(s) that may be associated with infectious hypodermal and hematopoietic necrosis virus (IHHNV) resistance or susceptibility. Of the 100 10-mer random primers and 100 intersimple...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-117

    authors: Hizer SE,Dhar AK,Klimpel KR,Garcia DK

    更新日期:2002-02-01 00:00:00

  • A direct repeat sequence associated with the centromeric retrotransposons in wheat.

    abstract::A high-density BAC filter of Triticum monococcum was screened for the presence of a centromeric retrotransposon using the integrase region as a probe. Southern hybridization to the BAC digests using total genomic DNA probes of Triticum monococcum, Triticum aestivum, and Hordeum vulgare detected differentially hybridiz...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g04-034

    authors: Ito H,Nasuda S,Endo TR

    更新日期:2004-08-01 00:00:00

  • Candidate disease resistance genes in sunflower cloned using conserved nucleotide-binding site motifs: genetic mapping and linkage to the downy mildew resistance gene Pl1.

    abstract::Disease resistance gene candidates (RGCs) belonging to the nucleotide-binding site (NBS) superfamily have been cloned from numerous crop plants using highly conserved DNA sequence motifs. The aims of this research were to (i) isolate genomic DNA clones for RGCs in cultivated sunflower (Helianthus annuus L.) and (ii) m...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g00-110

    authors: Gedil MA,Slabaugh MB,Berry S,Johnson R,Michelmore R,Miller J,Gulya T,Knapp SJ

    更新日期:2001-04-01 00:00:00

  • Development and characterization of recombinant chromosome substitution lines (RCSLs) using Hordeum vulgare subsp. spontaneum as a source of donor alleles in a Hordeum vulgare subsp. vulgare background.

    abstract::The ancestor of barley (Hordeum vulgare subsp. spontaneum) may be a source of novel alleles for crop improvement. We developed a set of recombinant chromosome substitution lines (RCSLs) using an accession of H. vulgare subsp. spontaneum (Caesarea 26-24, from Israel) as the donor and Hordeum vulgare subsp. vulgare 'Har...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g03-080

    authors: Matus I,Corey A,Filichkin T,Hayes PM,Vales MI,Kling J,Riera-Lizarazu O,Sato K,Powell W,Waugh R

    更新日期:2003-12-01 00:00:00

  • Molecular characterization and chromosomal distribution of species-specific repetitive DNA sequences from Beta corolliflora, a wild relative of sugar beet.

    abstract::Repetitive DNA sequences have been isolated from a Sau3AI plasmid library of tetraploid Beta corolliflora (2n = 4x = 36), a wild relative of sugar beet (B. vulgaris). The library was screened by differential hybridization with genomic DNA of B. corolliflora and B. vulgaris. When used as probes for Southern hybridizati...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g00-084

    authors: Gao D,Schmidt T,Jung C

    更新日期:2000-12-01 00:00:00

  • A bacterial artificial chromosome library for 'Jefferson' hazelnut and identification of clones associated with eastern filbert blight resistance and pollen-stigma incompatibility.

    abstract::European hazelnut (Corylus avellana L.) is the only economically important nut crop in the family Betulaceae. Because of its small genome size (~385 Mb / 1C), relatively short life cycle, availability of a dense linkage map, and amenability to transformation by Agrobacterium, the European hazelnut could serve as a mod...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g11-048

    authors: Sathuvalli VR,Mehlenbacher SA

    更新日期:2011-10-01 00:00:00

  • Whole genome sequencing of Gir cattle for identifying polymorphisms and loci under selection.

    abstract::Genetic variation in Gir cattle (Bos indicus) has so far not been well characterized. In this study, we used whole genome sequencing of three Gir bulls and a pooled sample from another 11 bulls to identify polymorphisms and loci under selection. A total of 9 990 733 single nucleotide polymorphisms (SNPs) and 604 308 i...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2013-0082

    authors: Liao X,Peng F,Forni S,McLaren D,Plastow G,Stothard P

    更新日期:2013-10-01 00:00:00

  • Genetic map of the powdery mildew resistance gene in soybean PI 243540.

    abstract::Powdery mildew (caused by Microsphaera diffusa Cooke & Peck) is a common disease of soybean in many soybean-growing regions of the world and under greenhouse conditions. The previously reported Rmd locus of soybean for resistance to powdery mildew was mapped on soybean molecular linkage group J (chromosome 16). We hav...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g10-015

    authors: Kang ST,Mian MA

    更新日期:2010-05-01 00:00:00

  • An improved genetic linkage map for cowpea (Vigna unguiculata L.) combining AFLP, RFLP, RAPD, biochemical markers, and biological resistance traits.

    abstract::An improved genetic linkage map has been constructed for cowpea (Vigna unguiculata L. Walp.) based on the segregation of various molecular markers and biological resistance traits in a population of 94 recombinant inbred lines (RILs) derived from the cross between 'IT84S-2049' and '524B'. A set of 242 molecular marker...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-102

    authors: Ouédraogo JT,Gowda BS,Jean M,Close TJ,Ehlers JD,Hall AE,Gillaspie AG,Roberts PA,Ismail AM,Bruening G,Gepts P,Timko MP,Belzile FJ

    更新日期:2002-02-01 00:00:00

  • Complete chloroplast genome sequencing and comparative analysis reveals changes to the chloroplast genome after allopolyploidization in Cucumis.

    abstract::Allopolyploids undergo 'genomic shock' leading to large genetic and epigenetic modifications. Previous studies mainly focused on nuclear changes, while little is known about the inheritance and changes of organelle genome in allopolyploidization. The synthetic allotetraploid Cucumis ×hytivus, which is generated via hy...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2020-0134

    authors: Zhai Y,Yu X,Zhou J,Li J,Tian Z,Wang P,Meng Y,Zhao Q,Lou Q,Du S,Chen J

    更新日期:2021-01-18 00:00:00

  • Phylogeny and expression of paralogous and orthologous sulphate transporter genes in diploid and hexaploid wheats.

    abstract::Twelve genes encoding two closely related subtypes (ST1.1a and ST1.1b) of a sulphate transporter have been identified in the diploid wheats Aegilops tauschii, Triticum urartu, and Aegilops speltoides, as well as the hexaploid Triticum aestivum. Based on phylogenetic comparisons with other plant sulphate transporters, ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g04-011

    authors: Buchner P,Prosser IM,Hawkesford MJ

    更新日期:2004-06-01 00:00:00

  • Presence of a centromeric filament during meiosis.

    abstract::Spermatocytes at meiotic metaphase I and anaphase I have a characteristic centromeric filament in a variety of vertebrate organisms. This centromeric filament was first demonstrated on mouse spermatocytes and its presence is now extended to spermatocytes from the human, rat, golden hamster, bull, and chicken. The visu...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g91-136

    authors: Solari AJ,Tandler CJ

    更新日期:1991-12-01 00:00:00

  • Construction and characterization of two BAC libraries from Brachypodium distachyon, a new model for grass genomics.

    abstract::Brachypodium is well suited as a model system for temperate grasses because of its compact genome and a range of biological features. In an effort to develop resources for genome research in this emerging model species, we constructed 2 bacterial artificial chromosome (BAC) libraries from an inbred diploid Brachypodiu...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-087

    authors: Huo N,Gu YQ,Lazo GR,Vogel JP,Coleman-Derr D,Luo MC,Thilmony R,Garvin DF,Anderson OD

    更新日期:2006-09-01 00:00:00

  • Multiple origins of cultivated radishes as evidenced by a comparison of the structural variations in mitochondrial DNA of Raphanus.

    abstract::Configurations of mitochondrial coxI and orfB gene regions were analysed by polymerase chain reaction (PCR) in three wild and one cultivated species of Raphanus. A total of 207 individual plants from 60 accessions were used. PCR with five combinations of primers identified five different amplification patterns both in...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-110

    authors: Yamagishi H,Terachi T

    更新日期:2003-02-01 00:00:00

  • Characterisation and physical localisation of Ty1-copia-like retrotransposons in four Alstroemeria species.

    abstract::The genus Alstroemeria contains species with large genomes (2C = 36.5-78.9 pg (17,600-38,000 Mb) in those species with 2n = 2x = 16). We investigated the diversity and genomic and chromosomal organisation of Ty1-copia-like retrotransposons in four Alstroemeria species. Analysis of 33 PCR-amplified sequences correspond...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g98-048

    authors: Kuipers AG,Heslop-Harrison JS,Jacobsen E

    更新日期:1998-06-01 00:00:00

  • S1 satellite DNA as a taxonomic marker in brown frogs: molecular evidence that Rana graeca graeca and Rana graeca italica are different species.

    abstract::The brown frog Rana graeca was believed to be present in two areas, the Balkan Peninsula and the Italian Apennines. We have characterised the S1 satellite DNA family from Rana graeca graeca and compared it with that of Rana graeca italica. On Southern blots, the patterns of S1 satellite DNA bands are very different be...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-125

    authors: Picariello O,Feliciello I,Bellinello R,Chinali G

    更新日期:2002-02-01 00:00:00

  • Isolation and preliminary characterization of histone H1.b allelic variants from quail erythrocytes.

    abstract::Our goal was to purify and characterize the allelic variants H1b1 and H1b2 of histone H1.b, one of the seven subtypes of this linker histone extracted from Japanese quail erythrocyte nuclei. These variants are revealed phenotypically as band H1.3 or part of band H1.4 by polyacrylamide gel electrophoresis (PAGE) in sod...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Pałyga J,Neelin JM

    更新日期:1998-10-01 00:00:00

  • Interactions between the scs and Vi genes in alloplasmic durum wheat.

    abstract::Two nuclear genes, vitality (Vi) on an A- or B-genome chromosome and species cytoplasm specific (scs) on a 1DL telosome from Triticum aestivum L. or a telosome from Aegilops uniaristata Vis. (un telosome), improved compatibility between the nucleus of Triticum turgidum L. var. durum and the cytoplasm of Ae. longissima...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g94-029

    authors: Maan SS

    更新日期:1994-04-01 00:00:00

  • QTL mapping of BNYVV resistance from the WB41 source in sugar beet.

    abstract::The most important rhizomania-resistance gene in sugar beet is the Rz1 gene from the Holly Sugar Company in California, the source widely used to breed partially resistant varieties. Other important gene sources are WB41 and WB42, which both originate from Beta vulgaris subsp. maritima collected in Denmark, and which ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g04-108

    authors: Gidner S,Lennefors BL,Nilsson NO,Bensefelt J,Johansson E,Gyllenspetz U,Kraft T

    更新日期:2005-04-01 00:00:00

  • Construction of a genetic linkage map in celery using DNA-based markers.

    abstract::A F2 population of two celery cultivated types (Apium graveolens L. var. rapaceum and A. graveolens L. var. secalinum) was used to construct a linkage map consisting of 29 RFLP (restriction fragment length polymorphism), 100 RAPD (random amplified polymorphic DNA), four isozyme, one disease resistance, and one growth ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g95-005

    authors: Yang X,Quiros CF

    更新日期:1995-02-01 00:00:00

  • EST sequencing and gene expression profiling of cultivated peanut (Arachis hypogaea L.).

    abstract::Peanut (Arachis hypogaea L.) is one of the most important oil crops in the world. However, biotechnological based improvement of peanut is far behind many other crops. It is critical and urgent to establish the biotechnological platform for peanut germplasm innovation. In this study, a peanut seed cDNA library was con...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g10-074

    authors: Bi YP,Liu W,Xia H,Su L,Zhao CZ,Wan SB,Wang XJ

    更新日期:2010-10-01 00:00:00

  • Genetic variation for waterlogging tolerance in the Triticeae and the chromosomal location of genes conferring waterlogging tolerance in Thinopyrum elongatum.

    abstract::A number of Triticeae species were tested for tiller production, shoot dry matter production, and root penetration in waterlogged soil, and Thinopyrum elongatum and Elytrigia repens were shown to have better tolerance than wheat using these criteria. Tests of a number of wheat-alien amphiploids showed that there was a...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-110

    authors: Taeb M,Koebner RM,Forster BP

    更新日期:1993-10-01 00:00:00

  • A combined RFLP-SSR-AFLP map of tetraploid cotton based on a Gossypium hirsutum x Gossypium barbadense backcross population.

    abstract::An interspecific Gossypium hirsutum x Gossypium barbadense backcross population of 75 BC1 plants was evaluated for 1014 markers. The map consists of 888 loci, including 465 AFLPs, 229 SSRs, 192 RFLPs, and 2 morphological markers, ordered in 37 linkage groups that represent most if not all of the 26 chromosomes, altoge...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g03-050

    authors: Lacape JM,Nguyen TB,Thibivilliers S,Bojinov B,Courtois B,Cantrell RG,Burr B,Hau B

    更新日期:2003-08-01 00:00:00

  • Genome-wide analysis of the HAK potassium transporter gene family reveals asymmetrical evolution in tobacco (Nicotiana tabacum).

    abstract::Being an essential mineral nutrient, potassium (K+) plays numerous important roles in plant growth and development and determines the yield and quality of crop products. The cellular level of K+ is controlled to a large extent by the K+ transporter, which belongs to the KT/HAK/KUP (HAK) family. However, little is know...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2018-0187

    authors: Song Z,Wu X,Gao Y,Cui X,Jiao F,Chen X,Li Y

    更新日期:2019-04-01 00:00:00

  • Linking adults and immatures of South African marine fishes.

    abstract::The early life-history stages of fishes are poorly known, impeding acquisition of the identifications needed to monitor larval recruitment and year-class strength. A comprehensive database of COI sequences, linked to authoritatively identified voucher specimens, promises to change this situation, representing a signif...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0212

    authors: Steinke D,Connell AD,Hebert PD

    更新日期:2016-11-01 00:00:00

  • Molecular evolution of ribosomal intergenic spacers in Odontophrynus americanus 2n and 4n (Amphibia: Anura).

    abstract::Ribosomal intergenic spacers (IGSs) of Odontophrynus americanus 2n and 4n were cloned, restriction mapped, and partially sequenced. Three distinct regions, namely alpha, beta, and delta, were identified in the IGSs. The alpha and beta regions flanked the 28S and 18S rRNA genes, respectively, conserving an identical re...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-134

    authors: Alvares LE,Polanco C,Brison O,Coutinho LL,Ruiz IR

    更新日期:2002-02-01 00:00:00

  • A study of homologous chromosomes using a morphometric approach.

    abstract::A previous study of 100 karyotyped metaphase cells has demonstrated the utility of a graphic arts tool in deriving chromosome measurements for relative length determination. In the present study we utilize this same approach to address the question: "What are the average differences in relative lengths between apparen...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-132

    authors: Mark HF,Wyandt HE,Pan T,Mark R Jr,Paramenter M,Campbell W,Mark Y

    更新日期:1993-10-01 00:00:00