Bioinformatic analysis of BBTV satellite DNA in Hainan.

Abstract:

:Banana bunchy top virus (BBTV), family Nanaviridae, genus Babuvirus, is a single stranded DNA virus (ssDNA) that causes banana bunchy top disease (BBTD) in banana plants. It is the most common and most destructive of all viruses in these plants and is widespread throughout the Asia-Pacific region. In this study we isolated, cloned and sequenced a BBTV sample from Hainan Island, China. The results from sequencing and bioinformatics analysis indicate this isolate represents a satellite DNA component with 12 DNA sequences motifs. We also predicted the physical and chemical properties, structure, signal peptide, phosphorylation, secondary structure, tertiary structure and functional domains of its encoding protein, and compare them with the corresponding quantities in the replication initiation protein of BBTV DNA1.

journal_name

Virol Sin

journal_title

Virologica Sinica

authors

Yu NT,Feng TC,Zhang YL,Wang JH,Liu ZX

doi

10.1007/s12250-011-3196-7

subject

Has Abstract

pub_date

2011-08-01 00:00:00

pages

279-84

issue

4

eissn

1674-0769

issn

1995-820X

journal_volume

26

pub_type

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