Mitigation of variation observed in a peripheral blood mononuclear cell (PBMC) based HIV-1 neutralization assay by donor cell pooling.

Abstract:

:Cultured primary peripheral blood mononuclear cells (PBMC) represent a potentially physiologic in vitro model of HIV-1 infection, but assessment of antibody-mediated HIV-1 neutralization using PBMC has been hindered by donor variability and lack of a sustainable individual PBMC source. To advance this model for HIV vaccine evaluation, intra- and inter-assay variability were assessed using monoclonal and polyclonal antibodies and PBMC targets from multiple HIV-seronegative donors. Inter-assay variability was introduced by using different PBMC for virus propagation, and more substantially, for assay targets. Neutralization titers varied by as much as 4 logs when using different individual donor PBMC as targets; variability was antibody-specific, with the greatest variation observed using an individual polyclonal plasma. Pooling of multiple PBMC donors significantly reduced median inter-assay variation to the level of intra-assay variation, suggesting a pathway forward for establishing a uniform, sustainable and standardized approach to the assessment of antibody function using a PBMC model.

journal_name

Virology

journal_title

Virology

authors

Wieczorek L,Brown BK,Delsarto Macedo C,Wesberry-Schmierer M,Ngauy V,Rosa Borges A,Michael NL,Marovich MA,Montefiori DC,Polonis VR

doi

10.1016/j.virol.2013.09.014

subject

Has Abstract

pub_date

2013-12-01 00:00:00

pages

240-8

issue

1-2

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(13)00546-1

journal_volume

447

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Isolation of a Friend recombinant polytropic virus with a T-cell-restricted leukemogenicity.

    abstract::Hematopoietic malignant cells of various types were isolated from ICFW mice inoculated as newborn or adult with F-MuLV and grafted into recipient mice. After repeated in vivo cell transplants, several recombinant polytropic viruses (also termed MCF or dualtropic viruses) were isolated from tumors by limiting dilution....

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90360-4

    authors: Della-Valle V,Wendling F,Sitbon M,Varlet P,Mathieu-Mahul D,Larsen CJ

    更新日期:1990-10-01 00:00:00

  • The equine arteritis virus induces apoptosis via caspase-8 and mitochondria-dependent caspase-9 activation.

    abstract::We have previously showed that equine arteritis virus (EAV), an arterivirus, induces apoptosis in vitro. To determine the caspase activation pathways involved in EAV-induced apoptosis, target cells were treated with peptide inhibitors of apoptosis Z-VAD-FMK (pan-caspase inhibitor), Z-IETD-FMK (caspase-8-specific inhib...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2007.05.023

    authors: St-Louis MC,Archambault D

    更新日期:2007-10-10 00:00:00

  • Simvastatin and oseltamivir combination therapy does not improve the effectiveness of oseltamivir alone following highly pathogenic avian H5N1 influenza virus infection in mice.

    abstract::Nonspecific anti-inflammatory drugs have been purported to reduce the burden of severe influenza disease. We demonstrate that, unlike oseltamivir administration, simvastatin administration did not reduce morbidity, mortality, or viral load of mice infected with H1N1 or H5N1 viruses. No added benefit to the efficacy of...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.01.017

    authors: Belser JA,Szretter KJ,Katz JM,Tumpey TM

    更新日期:2013-04-25 00:00:00

  • Helicase ATPase activity of the Tobacco mosaic virus 126-kDa protein modulates replicase complex assembly.

    abstract::Mutations disrupting helicase domain motifs of the Tobacco mosaic virus 126/183-kDa proteins were investigated for their effect on replicase function and assembly. These mutations inhibited virus replication but did not affect 126-kDa induced N gene resistance or RNAi suppression. However, in vivo expressed 126-kDa mo...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.03.019

    authors: Wang X,Kelman Z,Culver JN

    更新日期:2010-07-05 00:00:00

  • Potato virus A genome-linked protein VPg is an intrinsically disordered molten globule-like protein with a hydrophobic core.

    abstract::Genome-linked protein VPg of Potato virus A (PVA; genus Potyvirus) has essential functions in all critical steps of PVA infection, i.e. replication, movement, and virulence. Structural features of the recombinant PVA VPg were investigated with the aim to create an outline for structure-function relationships. Circular...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.04.025

    authors: Rantalainen KI,Uversky VN,Permi P,Kalkkinen N,Dunker AK,Mäkinen K

    更新日期:2008-08-01 00:00:00

  • Primary HIV-1 R5 isolates from end-stage disease display enhanced viral fitness in parallel with increased gp120 net charge.

    abstract::To better understand the evolution of the viral envelope glycoproteins (Env) in HIV-1 infected individuals who progress to AIDS maintaining an exclusive CCR5-using (R5) virus population, we cloned and sequenced the env gene of longitudinally obtained primary isolates. A shift in the electrostatic potential towards an ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.06.014

    authors: Repits J,Sterjovski J,Badia-Martinez D,Mild M,Gray L,Churchill MJ,Purcell DF,Karlsson A,Albert J,Fenyö EM,Achour A,Gorry PR,Jansson M

    更新日期:2008-09-15 00:00:00

  • Hepatitis E virus (HEV): molecular cloning and sequencing of the full-length viral genome.

    abstract::We have recently described the cloning of a portion of the hepatitis E virus (HEV) and confirmed its etiologic association with enterically transmitted (waterborne, epidemic) non-A, non-B hepatitis. The virus consists of a single-stranded, positive-sense RNA genome of approximately 7.5 kb, with a polyadenylated 3' end...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90760-9

    authors: Tam AW,Smith MM,Guerra ME,Huang CC,Bradley DW,Fry KE,Reyes GR

    更新日期:1991-11-01 00:00:00

  • Multiple small RNA species and the viroid hypothesis for the sunblotch disease of avocado.

    abstract::Multiple RNA species (ASV(1-5)) ranging in size from about 61,000 to 185,000 daltons have been detected in association with sunblotch disease of avocado. The predominant species, ASV(5), with a molecular weight of 61,000 accumulates to concentration approaching 5 S RNA. All RNA species are detected in extracts from sy...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(80)90370-0

    authors: Semancik JS,Desjardins PR

    更新日期:1980-07-15 00:00:00

  • Induction of type-specific neutralizing antibodies by capsomeres of human papillomavirus type 33.

    abstract::The immunogenicity of capsomeres of human papillomavirus type 33 was evaluated in a dose-response analysis. Capsomeres were obtained free of capsids by expression of L1 carrying the single point mutation C427S. Neutralizing antibodies were detected using an in vitro pseudoinfection assay. Capsomeres induced type-speci...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0875

    authors: Fligge C,Giroglou T,Streeck RE,Sapp M

    更新日期:2001-05-10 00:00:00

  • Biological characteristics and propagation of human rhinovirus-C in differentiated sinus epithelial cells.

    abstract::Information about the basic biological properties of human rhinovirus-C (HRV-C) viruses is lacking due to difficulties with culturing these viruses. Our objective was to develop a cell culture system to grow HRV-C. Epithelial cells from human sinuses (HSEC) were differentiated at air-liquid interface (ALI). Differenti...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.11.002

    authors: Ashraf S,Brockman-Schneider R,Bochkov YA,Pasic TR,Gern JE

    更新日期:2013-02-05 00:00:00

  • Adoptive transfer of infectious bronchitis virus primed alphabeta T cells bearing CD8 antigen protects chicks from acute infection.

    abstract::Infectious bronchitis virus (IBV) infection and associated illness may be dramatically modified by passive transfer of immune T lymphocytes. Lymphocytes collected 10 days postinfection were transferred to naive chicks before challenge with virus. As determined by respiratory illness and viral load, transfer of syngene...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0211

    authors: Seo SH,Pei J,Briles WE,Dzielawa J,Collisson EW

    更新日期:2000-03-30 00:00:00

  • Structure of the gene encoding the M1 protein of sonchus yellow net virus.

    abstract::The gene encoding the M1 protein of sonchus yellow net virus (SYNV), a plant rhabdovirus, has been sequenced and identified by Western blot analysis of SYNV proteins using antibodies directed against a fusion protein derived from a portion of the sequenced gene. The M1 gene is positioned between nucleotides 4039 and 5...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90289-4

    authors: Hillman BI,Heaton LA,Hunter BG,Modrell B,Jackson AO

    更新日期:1990-11-01 00:00:00

  • A conserved leucine that constricts the pore through the capsid fivefold cylinder plays a central role in parvoviral infection.

    abstract::The atomic structure of the DNA-containing T = 1 particle of the parvovirus minute virus of mice (MVM) reveals cylindrical projections at each fivefold symmetry axis, each containing an 8 Angstrom pore through which runs 10 amino acids of a single VP2 N-terminus. The tightest constriction of this pore is formed at its...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2004.03.006

    authors: Farr GA,Tattersall P

    更新日期:2004-06-01 00:00:00

  • Evidence for replication of cauliflower mosaic virus DNA in plant nuclei.

    abstract::Cellular organelles of cauliflower mosaic virus-infected turnip plants were isolated, incubated with 32P-labeled deoxyribonucleoside triphosphates and assayed for their ability to synthesize virus-specific DNA. Only nuclei were found to synthesize a labeled DNA product. This DNA migrated during agarose gel electrophor...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(82)90124-6

    authors: Ansa OA,Bowyer JW,Shepherd RJ

    更新日期:1982-08-01 00:00:00

  • Effects of DEAE-dextran on infection and hemolysis by VSV. Evidence that nonspecific electrostatic interactions mediate effective binding of VSV to cells.

    abstract::The polycation DEAE-dextran increased the binding of VSV to BHK cells about fourfold over a wide range of VSV concentrations. The same proportion of bound virions was internalized by the cell in the presence or absence of DEAE-dextran. Viral primary RNA production was increased to the equivalent of a 4- to 4.5-fold in...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90429-x

    authors: Bailey CA,Miller DK,Lenard J

    更新日期:1984-02-01 00:00:00

  • Loss of HIV-specific memory B-cells as a potential mechanism for the dysfunction of the humoral immune response against HIV.

    abstract::A central, yet unresolved issue in the pathogenesis of HIV disease is the mechanism of antibody perturbation. In this study, HIV-specific memory B-cells were quantified in groups of infected subjects and compared with memory responses to other antigens and antibody titers. HIV-specific memory B-cell responses were vig...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.11.003

    authors: Bussmann BM,Reiche S,Bieniek B,Krznaric I,Ackermann F,Jassoy C

    更新日期:2010-02-05 00:00:00

  • Pirates of the Caudovirales.

    abstract::Molecular piracy is a biological phenomenon in which one replicon (the pirate) uses the structural proteins encoded by another replicon (the helper) to package its own genome and thus allow its propagation and spread. Such piracy is dependent on a complex web of interactions between the helper and the pirate that occu...

    journal_title:Virology

    pub_type: 杂志文章,评审

    doi:10.1016/j.virol.2012.10.028

    authors: Christie GE,Dokland T

    更新日期:2012-12-20 00:00:00

  • The RING finger domain of the varicella-zoster virus open reading frame 61 protein is required for its transregulatory functions.

    abstract::Varicella-zoster virus (VZV) open reading frame 61 (ORF61) protein transactivates expression of VZV promoters. VZV ORF61 is functionally homologous to herpes simplex virus type 1 (HSV-1)-infected cell protein 0 (ICP0); however, amino acid sequence homology of these two proteins is limited to the RING finger domains, a...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1639

    authors: Moriuchi H,Moriuchi M,Cohen JI

    更新日期:1994-11-15 00:00:00

  • Effect of receptor binding domain mutations on receptor binding and transmissibility of avian influenza H5N1 viruses.

    abstract::Although H5N1 influenza viruses have been responsible for hundreds of human infections, these avian influenza viruses have not fully adapted to the human host. The lack of sustained transmission in humans may be due, in part, to their avian-like receptor preference. Here, we have introduced receptor binding domain mut...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2011.02.015

    authors: Maines TR,Chen LM,Van Hoeven N,Tumpey TM,Blixt O,Belser JA,Gustin KM,Pearce MB,Pappas C,Stevens J,Cox NJ,Paulson JC,Raman R,Sasisekharan R,Katz JM,Donis RO

    更新日期:2011-04-25 00:00:00

  • Characterization of a novel alphaherpesvirus associated with fatal infections of domestic rabbits.

    abstract::A virus was found to be associated with a severe disease affecting rabbits on a farm near Anchorage, Alaska. Extracts from the skin of infected rabbits produced syncytia and cell lysis in cultured rabbit skin, rabbit kidney, and Vero cells. Examination of the infectious agent by electron microscopy revealed an icosahe...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2008.05.003

    authors: Jin L,Löhr CV,Vanarsdall AL,Baker RJ,Moerdyk-Schauwecker M,Levine C,Gerlach RF,Cohen SA,Alvarado DE,Rohrmann GF

    更新日期:2008-08-15 00:00:00

  • The regions of sequence variation in caulimovirus gene VI.

    abstract::The sequence of gene VI from figwort mosaic virus (FMV) clone x4 was determined and compared with that previously published for FMV clone DxS. Both clones originated from the same virus isolation, but the virus used to clone DxS was propagated extensively in a host of a different family prior to cloning whereas that u...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90624-k

    authors: Sanger M,Daubert S,Goodman RM

    更新日期:1991-06-01 00:00:00

  • Guinea pig cytomegalovirus GP84 is a functional homolog of the human cytomegalovirus (HCMV) UL84 gene that can complement for the loss of UL84 in a chimeric HCMV.

    abstract::The guinea pig cytomegalovirus (GPCMV) co-linear gene and potential functional homolog of HCMV UL84 (GP84) was investigated. The GP84 gene had delayed early transcription kinetics and transient expression studies of GP84 protein (pGP84) demonstrated that it targeted the nucleus and co-localized with the viral DNA poly...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.10.028

    authors: McGregor A,Choi KY,Schleiss MR

    更新日期:2011-02-05 00:00:00

  • Antigenic variation of SIV: mutations in V4 alter the neutralization profile.

    abstract::Antigenic variation is a characteristic feature of lentiviral infection. The SIV/macaque model of AIDS provides an ideal system in which to investigate the molecular basis of antigenic variation. The purpose of this study was to genetically map the nucleotide changes in env that alter the neutralization phenotype of S...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0348

    authors: Kinsey NE,Anderson MG,Unangst TJ,Joag SV,Narayan O,Zink MC,Clements JE

    更新日期:1996-07-01 00:00:00

  • Cloning of the genome of a densovirus and rescue of infectious virions from recombinant plasmid in the insect host Spodoptera littoralis.

    abstract::We have cloned an infectious genome of the Junonia coenia densonucleosis virus (JcDNV) into the bacterial plasmid pBR322. The viral genome could be rescued from the recombinant plasmid pBRJ by transfection of pBRJ DNA to sensitive Spodoptera littoralis larvae. pBRJ DNA produced a typical viral infection and a comparab...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(90)90308-e

    authors: Jourdan M,Jousset FX,Gervais M,Skory S,Bergoin M,Dumas B

    更新日期:1990-11-01 00:00:00

  • Physiological and molecular triggers for SARS-CoV membrane fusion and entry into host cells.

    abstract::During viral entry, enveloped viruses require the fusion of their lipid envelope with host cell membranes. For coronaviruses, this critical step is governed by the virally-encoded spike (S) protein, a class I viral fusion protein that has several unique features. Coronavirus entry is unusual in that it is often biphas...

    journal_title:Virology

    pub_type: 杂志文章,评审

    doi:10.1016/j.virol.2017.12.015

    authors: Millet JK,Whittaker GR

    更新日期:2018-04-01 00:00:00

  • Changes in the antigenicity of the hemagglutinin molecule of H3 influenza virus at acidic pH.

    abstract::In order to determine the location and biological significance of the acid-induced conformational change in influenza virus hemagglutinin (HA) reported by Skehel et al., monoclonal antibodies were prepared to the molecule before and after treatment at pH 5.0. These antibodies together with monoclonal antibodies to the...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(83)80015-4

    authors: Webster RG,Brown LE,Jackson DC

    更新日期:1983-04-30 00:00:00

  • Genomic organization of lettuce necrotic yellows rhabdovirus.

    abstract::We have mapped the genome of lettuce necrotic yellows virus (LNYV), the type member of the genus cytorhabdovirus of the family Rhabdoviridae. We have cloned and sequenced all intergenic regions and the 3' leader and 5' trailer of the negative-sense, single-stranded RNA genome of LNYV. The LNYV genome appears to contai...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1204

    authors: Wetzel T,Dietzgen RG,Dale JL

    更新日期:1994-05-01 00:00:00

  • The genes associated with trans-dominance of the influenza A cold-adapted live virus vaccine.

    abstract::Segment 7 (M) of the cold-adapted live influenza A virus vaccine plays a primary role in the ability of this virus to interfere with the replication of wild-type influenza A viruses. This conclusion is based on several lines of evidence. Single gene reassortant viruses derived by crossing influenza A/Ann Arbor/6/60 (H...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90011-y

    authors: Whitaker-Dowling P,Zvolenski R,Youngner JS

    更新日期:1991-01-01 00:00:00

  • Normal replication of vesicular stomatitis virus without C proteins.

    abstract::The expression of two small basic proteins (C and C') encoded by a second open reading frame of the New Jersey serotype of vesicular stomatitis virus (VSV) P gene was reported previously (Spiropoulou and Nichol, J. Virol., 67, 3103-3110, 1993). Here we found that the Indiana serotype virus also expressed C and C' prot...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0066

    authors: Kretzschmar E,Peluso R,Schnell MJ,Whitt MA,Rose JK

    更新日期:1996-02-15 00:00:00

  • Induction of an antiviral state by interferon in the absence of elevated levels of 2,5-oligo(A) synthetase and eIF-2 kinase.

    abstract::A series of clones has been derived from an interferon-resistant murine cell line, Ltk- aprt-, and their antiviral properties have been characterized. In the parental Ltk- aprt- line interferon is unable to establish antiviral properties or to increase the levels of 2,5-oligo(A) synthetase, the 2,5-oligo(A)-activated ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90400-x

    authors: Lewis JA

    更新日期:1988-01-01 00:00:00