Abstract:
:The immune system can mount T cell responses against tumors; however, the antigen specificities of tumor-infiltrating lymphocytes (TILs) are not well understood. We used yeast-display libraries of peptide-human leukocyte antigen (pHLA) to screen for antigens of "orphan" T cell receptors (TCRs) expressed on TILs from human colorectal adenocarcinoma. Four TIL-derived TCRs exhibited strong selection for peptides presented in a highly diverse pHLA-A∗02:01 library. Three of the TIL TCRs were specific for non-mutated self-antigens, two of which were present in separate patient tumors, and shared specificity for a non-mutated self-antigen derived from U2AF2. These results show that the exposed recognition surface of MHC-bound peptides accessible to the TCR contains sufficient structural information to enable the reconstruction of sequences of peptide targets for pathogenic TCRs of unknown specificity. This finding underscores the surprising specificity of TCRs for their cognate antigens and enables the facile indentification of tumor antigens through unbiased screening.
journal_name
Celljournal_title
Cellauthors
Gee MH,Han A,Lofgren SM,Beausang JF,Mendoza JL,Birnbaum ME,Bethune MT,Fischer S,Yang X,Gomez-Eerland R,Bingham DB,Sibener LV,Fernandes RA,Velasco A,Baltimore D,Schumacher TN,Khatri P,Quake SR,Davis MM,Garcia KCdoi
10.1016/j.cell.2017.11.043subject
Has Abstractpub_date
2018-01-25 00:00:00pages
549-563.e16issue
3eissn
0092-8674issn
1097-4172pii
S0092-8674(17)31433-2journal_volume
172pub_type
杂志文章相关文献
CELL文献大全abstract::A cDNA clone encoding a novel hematopoietic growth factor activity produced by a gibbon T cell line has been identified using a mammalian cell expression cloning system. The sequence of this cDNA proved to have significant homology to the sequence encoding murine interleukin 3 (IL-3). The human gene, which was readily...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(86)90360-0
更新日期:1986-10-10 00:00:00
abstract::DNA demethylating agents are approved for some blood malignancies and are under active investigation in solid tumors, but how these drugs work has remained unclear. In this issue of Cell, two groups show that these agents activate a toxic cellular antiviral program through transcriptional activation of endogenous retr...
journal_title:Cell
pub_type: 评论,杂志文章
doi:10.1016/j.cell.2015.08.005
更新日期:2015-08-27 00:00:00
abstract::The synthesis and secretion of plasminogen activator by cultured macrophages can be induced and stimulated by concanavalin A and by phorbol myristate acetate, and inhibited by such agents as glucocorticoids, mitotic inhibitors and compounds affecting cAMP metabolism. By the manipulation of stimulatory and inhibitory i...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(77)90086-1
更新日期:1977-07-01 00:00:00
abstract::Three membrane microdomains can be identified on docked vacuoles: "outside" membrane, not in contact with other vacuoles, "boundary" membrane that contacts adjacent vacuoles, and "vertices," where boundary and outside membrane meet. In living cells and in vitro, vacuole fusion occurs at vertices rather than from a cen...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/s0092-8674(02)00632-3
更新日期:2002-02-08 00:00:00
abstract::The S. cerevisiae CLN genes encode cyclin homologs essential for progression from G1 to S phase. The CLN2 gene encodes a 62 kd polypeptide that accumulates periodically, peaking during G1 and decreasing rapidly thereafter, and is rapidly lost following exposure of cells to mating pheromone. Cln2 abundance can be expla...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(90)90361-h
更新日期:1990-07-27 00:00:00
abstract::Chronic Pseudomonas aeruginosa infections evade antibiotic therapy and are associated with mortality in cystic fibrosis (CF) patients. We find that in vitro resistance evolution of P. aeruginosa toward clinically relevant antibiotics leads to phenotypic convergence toward distinct states. These states are associated w...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2017.12.012
更新日期:2018-01-11 00:00:00
abstract::In this issue of Cell, Korber et al. found that a SARS-CoV-2 variant in the spike protein D614G rapidly became dominant around the world. Although clinical and in vitro data suggest that D614G changes the virus phenotype, the impact of the mutation on transmission, disease, and vaccine and therapeutic development are ...
journal_title:Cell
pub_type: 评论,杂志文章
doi:10.1016/j.cell.2020.06.040
更新日期:2020-08-20 00:00:00
abstract::Chromatin assembly factor 1 (CAF-1) and Rtt106 participate in the deposition of newly synthesized histones onto replicating DNA to form nucleosomes. This process is critical for the maintenance of genome stability and inheritance of functionally specialized chromatin structures in proliferating cells. However, the mol...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2008.06.018
更新日期:2008-07-25 00:00:00
abstract::We used the interaction trap, a yeast genetic selection for interacting proteins, to isolate human cyclin-dependent kinase interactor 1 (Cdi1). In yeast, Cdi1 interacts with cyclin-dependent kinases, including human Cdc2, Cdk2, and Cdk3, but not with Ckd4. In HeLa cells, Cdi1 is expressed at the G1 to S transition, an...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(93)90498-f
更新日期:1993-11-19 00:00:00
abstract::We present a strategy for generating and analyzing comprehensive genetic-interaction maps, termed E-MAPs (epistatic miniarray profiles), comprising quantitative measures of aggravating or alleviating interactions between gene pairs. Crucial to the interpretation of E-MAPs is their high-density nature made possible by ...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2005.08.031
更新日期:2005-11-04 00:00:00
abstract::We studied the chromatin structure and methylation of ribosomal RNA genes (rDNA) in hybrids between Xenopus laevis and Xenopus borealis. S1-nuclease protection experiments showed that 97%-98% of the rRNA precursor in hybrid tadpoles was of the X. laevis type. Preferential expression of the laevis rDNA was correlated w...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(82)90105-2
更新日期:1982-05-01 00:00:00
abstract::The budding yeast, Saccharomyces cerevisiae, has emerged as an archetype of eukaryotic cell biology. Here we show that S. cerevisiae is also a model for the evolution of cooperative behavior by revisiting flocculation, a self-adherence phenotype lacking in most laboratory strains. Expression of the gene FLO1 in the la...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2008.09.037
更新日期:2008-11-14 00:00:00
abstract::This paper describes a model for the structure of DNA contained in three morphologically similar bacteriophages--T7, P22 and phiCd-1--based on the transient electric dichroism of intact phage. The reduced dichroism of each of the phages at perfect orientation is within the range +0.12 to +0.19. Assuming that the phage...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(79)90026-6
更新日期:1979-03-01 00:00:00
abstract::We have adopted Drosophila tissue culture cells as a host system for studying the structure and function of mammalian transcription factors. These cells provide an Sp1-deficient background and have been used in a complementation assay to identify functional domains of human transcription factor Sp1. The SV40 early pro...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(88)90144-4
更新日期:1988-12-02 00:00:00
abstract::Two papers published in 1984 by the Varshavsky laboratory revealed that the ubiquitin/proteasome pathway is the principal system for degradation of short-lived proteins in mammalian cells, setting the stage for future demonstrations of this pathway's many regulatory roles. This perspective discusses the impact of thos...
journal_title:Cell
pub_type: 评论,杂志文章,评审
doi:10.1016/s0092-8674(03)01074-2
更新日期:2004-01-23 00:00:00
abstract::Mutations in the Drosophila maternal genes plutonium (plu) and pan gu (png) have the striking phenotype that DNA replication initiates in unfertilized eggs. Fertilized eggs from plu or png mutant mothers also have a mutant phenotype; DNA replication is uncoupled from nuclear division, resulting in giant, polyploid nuc...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(91)90050-9
更新日期:1991-09-20 00:00:00
abstract::A recent series of papers, including Festa et al. (2011) in this issue, has revealed unexpected interdependent relationships among cell populations residing in and around the hair follicle. These interactions between different lineages of stem cells are crucial for hair follicle growth and cycling and point to a compl...
journal_title:Cell
pub_type: 评论,杂志文章
doi:10.1016/j.cell.2011.08.020
更新日期:2011-09-02 00:00:00
abstract::Maintaining the pluripotency of mouse ES cells requires both LIF (leukemia inhibitory factor) and unknown factors in serum. The paper from Ying et al. in this issue of Cell shows that BMP (bone morphogenetic protein) can replace serum in this capacity, defining molecular requirements for ES cell self-renewal. ...
journal_title:Cell
pub_type: 评论,杂志文章
doi:10.1016/s0092-8674(03)00853-5
更新日期:2003-10-31 00:00:00
abstract::Members of the myocyte enhancer factor-2 (MEF2) family of MADS domain transcription factors cannot induce myogenesis in transfected fibroblasts, but when coexpressed with the myogenic basic-helix-loop-helix (bHLH) proteins MyoD or myogenin they dramatically increase the extent of myogenic conversion above that seen wi...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(95)90139-6
更新日期:1995-12-29 00:00:00
abstract::The molecular mediator and functional significance of meal-associated brown fat (BAT) thermogenesis remains elusive. Here, we identified the gut hormone secretin as a non-sympathetic BAT activator mediating prandial thermogenesis, which consequentially induces satiation, thereby establishing a gut-secretin-BAT-brain a...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2018.10.016
更新日期:2018-11-29 00:00:00
abstract::Yeast chromosomes terminate in tracts of simple repetitive DNA (poly[G1-3T]). Mutations in the gene TEL1 result in shortened telomeres. Sequence analysis of TEL1 indicates that it encodes a very large (322 kDa) protein with amino acid motifs found in phosphatidylinositol/protein kinases. The closest homolog to TEL1 is...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(95)90479-4
更新日期:1995-09-08 00:00:00
abstract::Transposon Tn10 inserts at many sites in the bacterial chromosome, but preferentially inserts at particular hotspots. We believe we have identified the target DNA signal responsible for this specificity. We have determined the DNA sequences of 11 Tn10 insertion sites and identified a particular 6 base pair (bp) symmet...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(82)90385-3
更新日期:1982-01-01 00:00:00
abstract::Who are science journalists, and how can journalists and research scientists work together to improve science communication? ...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2016.10.051
更新日期:2016-11-17 00:00:00
abstract::The alpha IIb beta 3 integrin binds Arg-Gly-Asp-containing (RGD-containing) ligands in a cation-dependent interaction. A fourteen amino acid sequence, beta 3 (118-131), and an antibody to it, inhibited ligand binding functions of alpha IIb beta 3, and a 1:1 stoichiometric beta 3 (118-131)-RGD complex was detected by m...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(94)90551-7
更新日期:1994-11-18 00:00:00
abstract::The Hippo-signaling pathway is an important regulator of cellular proliferation and organ size. However, little is known about the role of this cascade in the control of cell fate. Employing a combination of lineage tracing, clonal analysis, and organoid culture approaches, we demonstrate that Hippo pathway activity i...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2014.03.060
更新日期:2014-06-05 00:00:00
abstract::Transfer RNAs (tRNAs) are primarily viewed as static contributors to gene expression. By developing a high-throughput tRNA profiling method, we find that specific tRNAs are upregulated in human breast cancer cells as they gain metastatic activity. Through loss-of-function, gain-of-function, and clinical-association st...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2016.05.046
更新日期:2016-06-02 00:00:00
abstract::Subsets of long-lived, tumor-initiating stem cells often escape cancer therapies. However, sources and mechanisms that generate tumor heterogeneity and drug-resistant cell population are still unfolding. Here, we devise a functional reporter system to lineage trace and/or genetic ablate signaling in TGF-β-activated sq...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2015.01.043
更新日期:2015-02-26 00:00:00
abstract::We have employed repeat units of herpes simplex virus (HSV) defective genomes to derive a cloning-amplifying vector (amplicon) that can replicate in eucaryotic cells in the presence of standard HSV helper virus. The design of the HSV amplicon system is based on the previous observation that cotransfection of cells wit...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(82)90035-6
更新日期:1982-08-01 00:00:00
abstract::Human hepatitis B virus core protein expressed in E. coli assembles into two sizes of particle. We have determined their three-dimensional structures by electron cryomicroscopy and image processing. The large and small particles correspond to triangulation number T = 4 and T = 3 dimer clustered packings, containing 24...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/0092-8674(94)90142-2
更新日期:1994-06-17 00:00:00
abstract::beta-glucocerebrosidase, the enzyme defective in Gaucher disease, is targeted to the lysosome independently of the mannose-6-phosphate receptor. Affinity-chromatography experiments revealed that the lysosomal integral membrane protein LIMP-2 is a specific binding partner of beta-glucocerebrosidase. This interaction in...
journal_title:Cell
pub_type: 杂志文章
doi:10.1016/j.cell.2007.10.018
更新日期:2007-11-16 00:00:00