Sequence of the genome ends and of the junction between the ends in concatemeric DNA of pseudorabies virus.

Abstract:

:The nucleotide sequences of the termini of the mature pseudorabies virus genome and of the junction between these termini in concatemeric DNA were compared. To ensure conservation of unmodified 5' and 3' termini, the end fragments obtained directly (uncloned) from mature viral DNA were sequenced. The sequence obtained from 5' and 3' end labeling revealed that whereas the L terminus was blunt ended, the S terminus had a 2-base (GG) 3' overhang. The sequences spanning the junction between the termini present in concatemeric DNA was also determined and compared with that expected when the two ends of the mature DNA were juxtaposed. This comparison showed that in concatemeric DNA the ends of the mature genome had become joined by blunt-end ligation of one of the strands and that the 2-nucleotide gap on the other strand had been repaired. A significant degree of homology between the sequences spanning the junction between the ends of the varicella-zoster virus and pseudorabies virus genomes was found.

journal_name

J Virol

journal_title

Journal of virology

authors

Harper L,Demarchi J,Ben-Porat T

doi

10.1128/JVI.60.3.1183-1185.1986

subject

Has Abstract

pub_date

1986-12-01 00:00:00

pages

1183-5

issue

3

eissn

0022-538X

issn

1098-5514

journal_volume

60

pub_type

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