Analysis of a clonal lineage of HIV-1 envelope V2/V3 conformational epitope-specific broadly neutralizing antibodies and their inferred unmutated common ancestors.

Abstract:

:V2/V3 conformational epitope antibodies that broadly neutralize HIV-1 (PG9 and PG16) have been recently described. Since an elicitation of previously known broadly neutralizing antibodies has proven elusive, the induction of antibodies with such specificity is an important goal for HIV-1 vaccine development. A critical question is which immunogens and vaccine formulations might be used to trigger and drive the development of memory B cell precursors with V2/V3 conformational epitope specificity. In this paper we identified a clonal lineage of four V2/V3 conformational epitope broadly neutralizing antibodies (CH01 to CH04) from an African HIV-1-infected broad neutralizer and inferred their common reverted unmutated ancestor (RUA) antibodies. While conformational epitope antibodies rarely bind recombinant Env monomers, a screen of 32 recombinant envelopes for binding to the CH01 to CH04 antibodies showed monoclonal antibody (MAb) binding to the E.A244 gp120 Env and to chronic Env AE.CM243; MAbs CH01 and CH02 also bound to transmitted/founder Env B.9021. CH01 to CH04 neutralized 38% to 49% of a panel of 91 HIV-1 tier 2 pseudoviruses, while the RUAs neutralized only 16% of HIV-1 isolates. Although the reverted unmutated ancestors showed restricted neutralizing activity, they retained the ability to bind to the E.A244 gp120 HIV-1 envelope with an affinity predicted to trigger B cell development. Thus, E.A244, B.9021, and AE.CM243 Envs are three potential immunogen candidates for studies aimed at defining strategies to induce V2/V3 conformational epitope-specific antibodies.

journal_name

J Virol

journal_title

Journal of virology

authors

Bonsignori M,Hwang KK,Chen X,Tsao CY,Morris L,Gray E,Marshall DJ,Crump JA,Kapiga SH,Sam NE,Sinangil F,Pancera M,Yongping Y,Zhang B,Zhu J,Kwong PD,O'Dell S,Mascola JR,Wu L,Nabel GJ,Phogat S,Seaman MS,Whitesides

doi

10.1128/JVI.05045-11

subject

Has Abstract

pub_date

2011-10-01 00:00:00

pages

9998-10009

issue

19

eissn

0022-538X

issn

1098-5514

pii

JVI.05045-11

journal_volume

85

pub_type

杂志文章
  • Replication of naturally occurring woodchuck hepatitis virus deletion mutants in primary hepatocyte cultures and after transmission to naive woodchucks.

    abstract::Woodchuck hepatitis virus (WHV) mutants with core internal deletions (CID) occur naturally in chronically WHV-infected woodchucks, as do hepatitis B virus mutants in humans. We studied the replication of WHV deletion mutants in primary woodchuck hepatocyte cultures and in vivo after transmission to naive woodchucks. B...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.8.3811-3818.2001

    authors: Lu M,Hilken G,Yang D,Kemper T,Roggendorf M

    更新日期:2001-04-01 00:00:00

  • Inhibition of host transcription by vesicular stomatitis virus involves a novel mechanism that is independent of phosphorylation of TATA-binding protein (TBP) or association of TBP with TBP-associated factor subunits.

    abstract::The matrix (M) protein of vesicular stomatitis virus (VSV) is a potent inhibitor in vivo of transcription by all three host RNA polymerases (RNAP). In the case of host RNA polymerase II (RNAPII), the inhibition is due to lack of activity of the TATA-binding protein (TBP), which is a subunit of the basal transcription ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.9.4453-4458.2001

    authors: Yuan H,Puckett S,Lyles DS

    更新日期:2001-05-01 00:00:00

  • Genetic variation during lytic reovirus infection: high-passage stocks of wild-type reovirus contain temperature-sensitive mutants.

    abstract::Wild-type clones of reovirus serotypes 1 (Lang), 2 (Jones), and 3 (Dearing) were serially passaged in L cells at a high multiplicity of infection, and the virus population was examined at passage levels 2, 5, and 11 for the presence of temperature-sensitive (ts) mutants. By passage 11 all three serotypes contained ts ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.34.1.285-287.1980

    authors: Ahmed R,Chakraborty PR,Fields BN

    更新日期:1980-04-01 00:00:00

  • Native but not denatured recombinant human immunodeficiency virus type 1 gp120 generates broad-spectrum neutralizing antibodies in baboons.

    abstract::The protection of individuals from human immunodeficiency virus type 1 (HIV-1) infection with an envelope subunit derived from a single isolate will require the presentation of conserved epitopes in gp120. The objective of the studies presented here was to test whether a native recombinant gp120 (rgp120) immunogen wou...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.66.1.172-182.1992

    authors: Haigwood NL,Nara PL,Brooks E,Van Nest GA,Ott G,Higgins KW,Dunlop N,Scandella CJ,Eichberg JW,Steimer KS

    更新日期:1992-01-01 00:00:00

  • The membrane-proximal domain of vesicular stomatitis virus G protein functions as a membrane fusion potentiator and can induce hemifusion.

    abstract::Recently we showed that the membrane-proximal stem region of the vesicular stomatitis virus (VSV) G protein ectodomain (G stem [GS]), together with the transmembrane and cytoplasmic domains, was sufficient to mediate efficient VSV budding (C. S. Robison and M. A. Whitt, J. Virol. 74:2239-2246, 2000). Here, we show tha...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.23.12300-12311.2002

    authors: Jeetendra E,Robison CS,Albritton LM,Whitt MA

    更新日期:2002-12-01 00:00:00

  • Porcine Reproductive and Respiratory Syndrome Virus Structural Protein GP3 Regulates Claudin 4 To Facilitate the Early Stages of Infection.

    abstract::Claudins (CLDN) are a family of proteins that represent the most important components of tight junctions, where they establish the paracellular barrier that controls the flow of molecules in the intercellular space between epithelial cells. Several types of viruses make full use of CLDN to facilitate entry into cells....

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00124-20

    authors: Ding G,Liu J,Shao Q,Wang B,Feng J,Li Y,Li L,Cao S,Cong F,Zhao Y,Liu S,Xiao Y

    更新日期:2020-09-29 00:00:00

  • Molecular requirements for human immunodeficiency virus type 1 plus-strand transfer: analysis in reconstituted and endogenous reverse transcription systems.

    abstract::We have developed a reconstituted system which models the events associated with human immunodeficiency virus type 1 (HIV-1) plus-strand transfer. These events include synthesis of plus-strand strong-stop DNA [(+) SSDNA] from a minus-strand DNA donor template covalently attached to human tRNA3Lys, tRNA primer removal,...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.6.4794-4805.1999

    authors: Wu T,Guo J,Bess J,Henderson LE,Levin JG

    更新日期:1999-06-01 00:00:00

  • Role of Vif in stability of the human immunodeficiency virus type 1 core.

    abstract::The Vif protein of human immunodeficiency virus type 1 (HIV-1) is important for virion infectivity. Previous studies have shown that vif-defective virions exhibit structural abnormalities in the virus core and are defective in the ability to complete proviral DNA synthesis in acutely infected cells. We developed novel...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.23.11055-11066.2000

    authors: Ohagen A,Gabuzda D

    更新日期:2000-12-01 00:00:00

  • Analysis of murine hepatitis virus strain A59 temperature-sensitive mutant TS-LA6 suggests that nsp10 plays a critical role in polyprotein processing.

    abstract::Coronaviruses are the largest RNA viruses, and their genomes encode replication machinery capable of efficient replication of both positive- and negative-strand viral RNAs as well as enzymes capable of processing large viral polyproteins into putative replication intermediates and mature proteins. A model described re...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00049-07

    authors: Donaldson EF,Graham RL,Sims AC,Denison MR,Baric RS

    更新日期:2007-07-01 00:00:00

  • Induction of macrophage procoagulant activity by murine hepatitis virus strain 3: role of tyrosine phosphorylation.

    abstract::The induction of a unique macrophage procoagulant molecule by murine hepatitis virus strain 3 correlates with the severity of viral hepatitis. The role of tyrosine phosphorylation in the signalling pathway leading to procoagulant expression was studied. Murine hepatitis virus strain 3 initiated a rapid increase in pho...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.69.9.5824-5828.1995

    authors: Dackiw AP,Zakrzewski K,Nathens AB,Cheung PY,Fingerote R,Levy GA,Rotstein OD

    更新日期:1995-09-01 00:00:00

  • Sequence analysis of in vivo defective interfering-like RNA of influenza A H1N1 pandemic virus.

    abstract::Influenza virus defective interfering (DI) particles are naturally occurring noninfectious virions typically generated during in vitro serial passages in cell culture of the virus at a high multiplicity of infection. DI particles are recognized for the role they play in inhibiting viral replication and for the impact ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00240-13

    authors: Saira K,Lin X,DePasse JV,Halpin R,Twaddle A,Stockwell T,Angus B,Cozzi-Lepri A,Delfino M,Dugan V,Dwyer DE,Freiberg M,Horban A,Losso M,Lynfield R,Wentworth DN,Holmes EC,Davey R,Wentworth DE,Ghedin E,INSIGHT FLU002 S

    更新日期:2013-07-01 00:00:00

  • The K-bZIP protein from Kaposi's sarcoma-associated herpesvirus interacts with p53 and represses its transcriptional activity.

    abstract::Kaposi's sarcoma-associated herpesvirus (KSHV) is a gammaherpesvirus that has been implicated in the pathogenesis of Kaposi's sarcoma. KSHV encodes K-bZIP (open reading frame K8), a protein that belongs to the basic region-leucine zipper (bZIP) family of transcription factors. Here we show that K-bZIP associates with ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.24.11977-11982.2000

    authors: Park J,Seo T,Hwang S,Lee D,Gwack Y,Choe J

    更新日期:2000-12-01 00:00:00

  • LANA and hnRNP A1 Regulate the Translation of LANA mRNA through G-Quadruplexes.

    abstract::During the latent phase, Kaposi's sarcoma-associated herpes virus (KSHV) maintains itself inside the host by escaping the host immune surveillance mechanism through restricted protein expression. Latency-associated nuclear antigen (LANA), the most abundantly expressed protein, is essential for viral persistence, as it...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01508-19

    authors: Dabral P,Babu J,Zareie A,Verma SC

    更新日期:2020-01-17 00:00:00

  • Donor- and ligand-dependent differences in C-C chemokine receptor 5 reexpression.

    abstract::N-terminal modifications of the chemokine RANTES bind to C-C chemokine receptor 5 (CCR5) and block human immunodeficiency virus type 1 (HIV-1) infection with greater efficacy than native RANTES. Modified RANTES compounds induce rapid CCR5 internalization and much slower receptor reexpression than native RANTES, sugges...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.2.661-671.2001

    authors: Sabbe R,Picchio GR,Pastore C,Chaloin O,Hartley O,Offord R,Mosier DE

    更新日期:2001-01-01 00:00:00

  • Anomalous behavior of the major avian myeloblastosis virus glycoprotein in the presence of sodium dodecyl sulfate.

    abstract::The sodium dodecyl sulfate (SDS) complex of the major glycoprotein of avian myeloblastosis virus exhibited an anomalously low free electrophoretic mobility compared with those of non-glycosylated protein standards. The apparent molecular weight of the glycoprotein calculated from the relation between log molecular wei...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.26.3.825-827.1978

    authors: Marciani DJ,Papamatheakis JD

    更新日期:1978-06-01 00:00:00

  • Coding assignment and nucleotide sequence of simian rotavirus SA11 gene segment 10: location of glycosylation sites suggests that the signal peptide is not cleaved.

    abstract::A cloned DNA copy of simian rotavirus SA11 genomic segment 10 was used to confirm the assignment of the nonstructural glycoprotein NCVP5 to this gene. Determination of the nucleotide sequence for gene 10 indicated that NCVP5 is 175 amino acids in length and has an N-terminal hydrophobic region with the characteristics...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.48.2.335-339.1983

    authors: Both GW,Siegman LJ,Bellamy AR,Atkinson PH

    更新日期:1983-11-01 00:00:00

  • Nucleotide sequence of human adenovirus type 12 DNA: comparative functional analysis.

    abstract::A fresh inoculum of human adenovirus type 12 (Ad12) was obtained from the American Type Culture Collection and passaged once on human embryonic kidney cells, and Ad12 DNA was prepared from the first-passage yield to avoid higher passages which might have generated host-virus DNA recombinants. The 18 PstI fragments of ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.1.379-389.1994

    authors: Sprengel J,Schmitz B,Heuss-Neitzel D,Zock C,Doerfler W

    更新日期:1994-01-01 00:00:00

  • Mapping of the hepatitis B virus pre-S1 domain involved in receptor recognition.

    abstract::Hepatitis B virus (HBV) and woolly monkey hepatitis B virus (WMHBV) are primate hepadnaviruses that display restricted tissue and host tropisms. Hepatitis D virus (HDV) particles pseudotyped with HBV and WMHBV envelopes (HBV-HDV and WM-HDV) preferentially infect human and spider monkey hepatocytes, respectively, there...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.15.9786-9798.2005

    authors: Barrera A,Guerra B,Notvall L,Lanford RE

    更新日期:2005-08-01 00:00:00

  • Different de novo initiation strategies are used by influenza virus RNA polymerase on its cRNA and viral RNA promoters during viral RNA replication.

    abstract::Various mechanisms are used by single-stranded RNA viruses to initiate and control their replication via the synthesis of replicative intermediates. In general, the same virus-encoded polymerase is responsible for both genome and antigenome strand synthesis from two different, although related promoters. Here we aimed...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.80.5.2337-2348.2006

    authors: Deng T,Vreede FT,Brownlee GG

    更新日期:2006-03-01 00:00:00

  • Glycoprotein I of varicella-zoster virus is required for viral replication in skin and T cells.

    abstract::Varicella-zoster virus (VZV) glycoprotein I (gI) is dispensable in cell culture; the SCIDhu model of VZV pathogenesis was used to determine whether gI is necessary in vivo. The parental and repaired viruses grew in human skin and thymus/liver implants, but the gI deletion mutant was not infectious. Thus, gI is essenti...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.16.8468-8471.2002

    authors: Moffat J,Ito H,Sommer M,Taylor S,Arvin AM

    更新日期:2002-08-01 00:00:00

  • Herpesvirus saimiri oncogene STP-C488 encodes a phosphoprotein.

    abstract::The STP-C488 open reading frame of herpesvirus saimiri encodes an oncoprotein that has transforming and tumor-inducing activities independent of the rest of the herpesvirus genome. STP-C488 protein has an unusual, membrane-associated, fibrous structure and is located primarily in perinuclear compartments. We now repor...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.66.3.1777-1780.1992

    authors: Jung JU,Desrosiers RC

    更新日期:1992-03-01 00:00:00

  • Role of the cytoskeleton in cell-to-cell transmission of human immunodeficiency virus.

    abstract::We previously observed that when human immunodeficiency virus (HIV)-infected T lymphocytes are added to epithelial cells, they adhere, polarize, and secrete virions unidirectionally onto the epithelium. Epithelial cells subsequently take up virus and become productively infected. We report here that colchicine treatme...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.5.2898-2905.1994

    authors: Pearce-Pratt R,Malamud D,Phillips DM

    更新日期:1994-05-01 00:00:00

  • Lytic but not latent replication of epstein-barr virus is associated with PML and induces sequential release of nuclear domain 10 proteins.

    abstract::Nuclear domains called ND10 (nuclear domain 10) are discrete nuclear protein aggregations characterized by a set of interferon-upregulated proteins including Sp100 and PML, where papova-, adeno-, and herpesviruses begin their transcription and DNA replication. Both the alpha- and betaherpesvirus subfamilies disrupt ND...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.74.24.11800-11810.2000

    authors: Bell P,Lieberman PM,Maul GG

    更新日期:2000-12-01 00:00:00

  • Genetic retargeting of adenovirus: novel strategy employing "deknobbing" of the fiber.

    abstract::For efficient and versatile use of adenovirus (Ad) as an in vivo gene therapy vector, modulation of the viral tropism is highly desirable. In this study, a novel method to genetically alter the Ad fiber tropism is described. The knob and the last 15 shaft repeats of the fiber gene were deleted and replaced with an ext...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.16.7280-7289.2001

    authors: Magnusson MK,Hong SS,Boulanger P,Lindholm L

    更新日期:2001-08-01 00:00:00

  • Fusion deficiency induced by mutations at the dimer interface in the Newcastle disease virus hemagglutinin-neuraminidase is due to a temperature-dependent defect in receptor binding.

    abstract::The tetrameric paramyxovirus hemagglutinin-neuraminidase (HN) protein mediates attachment to sialic acid-containing receptors as well as cleavage of the same moiety via its neuraminidase (NA) activity. The X-ray crystallographic structure of an HN dimer from Newcastle disease virus (NDV) suggests that a single site in...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.12.6913-6922.2003

    authors: Corey EA,Mirza AM,Levandowsky E,Iorio RM

    更新日期:2003-06-01 00:00:00

  • A bromodomain-containing protein from tomato specifically binds potato spindle tuber viroid RNA in vitro and in vivo.

    abstract::For the identification of RNA-binding proteins that specifically interact with potato spindle tuber viroid (PSTVd), we subjected a tomato cDNA expression library prepared from viroid-infected leaves to an RNA ligand screening procedure. We repeatedly identified cDNA clones that expressed a protein of 602 amino acids. ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.17.9685-9694.2003

    authors: Martínez de Alba AE,Sägesser R,Tabler M,Tsagris M

    更新日期:2003-09-01 00:00:00

  • Structural analysis of a 1.7-kilobase mouse mammary tumor virus-specific RNA.

    abstract::We have detected a mouse mammary tumor virus (MMTV)-specific 1.7-kilobase (kb) polyadenylated RNA in mammary glands of several mouse strains. In BALB/c mice, it is the only MMTV-specific RNA species present. C3H and GR mammary glands and tumors contain, in addition, 3.8- and 7.8-kb MMTV RNAs. Nuclease S1 analysis was ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.46.2.362-370.1983

    authors: van Ooyen AJ,Michalides RJ,Nusse R

    更新日期:1983-05-01 00:00:00

  • Characterization of structural and immunological properties of specific domains of Friend ecotropic and dual-tropic murine leukemia virus gp70s.

    abstract::A detailed comparison of the gp70 proteins of cloned ecotropic Friend murine leukemia virus (FLV) and dual-tropic Friend mink focus-forming virus (FrMCF) was performed by analyzing the structural and immunological properties of amino- and carboxy-terminal domains of these molecules generated upon controlled trypsiniza...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.49.2.452-458.1984

    authors: Pinter A,Honnen WJ

    更新日期:1984-02-01 00:00:00

  • Activities of ICP0 involved in the reversal of silencing of quiescent herpes simplex virus 1.

    abstract::ICP0 is a transcriptional activating protein required for the efficient replication and reactivation of latent herpes simplex virus 1 (HSV-1). Multiple regions of ICP0 contribute its activity, the most prominent of which appears to be the RING finger, which confers E3 ubiquitin ligase activity. A region in the C termi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02265-10

    authors: Ferenczy MW,Ranayhossaini DJ,Deluca NA

    更新日期:2011-05-01 00:00:00

  • The adenovirus E4 gene, in addition to the E1A gene, is important for trans-activation of E2 transcription and for E2F activation.

    abstract::Previous experiments have demonstrated that adenovirus infection of human and mouse cells leads to an E1A-dependent activation of the DNA-binding capacity of a cellular transcription factor termed E2F. E2F binds to two sites in the adenovirus E2 early promoter which have been shown to be critical for E1A-dependent E2 ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.63.9.3643-3650.1989

    authors: Reichel R,Neill SD,Kovesdi I,Simon MC,Raychaudhuri P,Nevins JR

    更新日期:1989-09-01 00:00:00