Conditionally replicating HIV and SIV variants.

Abstract:

:Conditionally replicating human immunodeficiency virus (HIV) and simian immunodeficiency virus (SIV) variants that can be switched on and off at will are attractive tools for HIV and SIV research. We constructed HIV and SIV variants in which the natural transcription control mechanism was replaced by the doxycycline (dox)-inducible Tet-On gene expression mechanism. These HIV-rtTA and SIV-rtTA variants are fully replication-competent, but replication is critically dependent on dox administration. We here describe how the dox-dependent virus variants may improve the safety of live-attenuated virus vaccines and how they can be used to study the immune responses that correlate with vaccine-induced protection. Furthermore, we review how these variants were initially designed and subsequently optimized by spontaneous viral evolution. These efforts yielded efficiently replicating and tightly dox-controlled HIV-rtTA and SIV-rtTA variants that replicate in a variety of cell and tissue culture systems, and in human immune system (HIS) mice and macaques, respectively. These viruses can be used as a tool in HIV and SIV biology studies and in vaccine research. We review how HIV-rtTA and SIV-rtTA were used to study the role of the viral TAR and Tat elements in virus replication.

journal_name

Virus Res

journal_title

Virus research

authors

Das AT,Berkhout B

doi

10.1016/j.virusres.2015.05.004

subject

Has Abstract

pub_date

2016-05-02 00:00:00

pages

66-75

eissn

0168-1702

issn

1872-7492

pii

S0168-1702(15)00175-6

journal_volume

216

pub_type

杂志文章,评审
  • In vitro synthesis of Japanese encephalitis virus (JEV) RNA: membrane and nuclear fractions of JEV-infected cells possess high levels of virus-specific RNA polymerase activity.

    abstract::Japanese encephalitis virus (JEV)-specific RNAs (including 42S RNA) were synthesized in subcellular fractions prepared from infected C6/36 cells. This in vitro RNA synthesis essentially required Mg2+ and four ribonucleotides, and it was enhanced by K+. The amounts of RNA synthesized in vitro (in extracts from JEV-infe...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(89)90078-6

    authors: Takegami T,Hotta S

    更新日期:1989-08-01 00:00:00

  • Zika virus research models.

    abstract::The 2015 Brazilian Zika virus outbreak sparked a rapid response to control the spread of the virus. What was first understood to be a mild self-resolving infection is now linked to significant neurological defects in both neonates and adults. The WHO declared the 2016 Zika epidemic a public health emergency and issued...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2017.07.025

    authors: Kublin JL,Whitney JB

    更新日期:2018-08-02 00:00:00

  • Prevalence and diversity of mycoviruses infecting the plant pathogen Ustilaginoidea virens.

    abstract::Rice false smut caused by Ustilaginoidea virens is a destructive disease in many rice-growing areas. Mycoviruses have been described in many fungal species, but there is little information regarding mycoviruses in U. virens. In this study, double-stranded (ds) RNA banding patterns were assessed in 198 wild-type isolat...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2014.08.022

    authors: Jiang Y,Zhang T,Luo C,Jiang D,Li G,Li Q,Hsiang T,Huang J

    更新日期:2015-01-02 00:00:00

  • Characterization of haemagglutinin-neuraminidase glycoprotein of Newcastle disease virus expressed by a recombinant baculovirus.

    abstract::A recombinant baculovirus containing a cDNA which encodes haemagglutinin-neuraminidase (HN) of Newcastle disease virus (NDV) was constructed. Spodoptera frugiperda cells infected with this recombinant virus produced a large amount of HN glycoprotein similar to the authentic HN in size. The recombinant HN glycoprotein ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(91)90059-5

    authors: Niikura M,Matsuura Y,Hattori M,Onuma M,Mikami T

    更新日期:1991-06-01 00:00:00

  • Preparation and characterization of monoclonal antibodies to nucleocapsid protein N and H glycoprotein of rinderpest virus.

    abstract::Fifteen stable mouse spleen cell myeloma hybrids (hybridomas) producing monoclonal antibodies to rinderpest virus proteins were produced. The specificity of these monoclonal antibodies was established by radioimmunoprecipitation followed by polyacrylamide gel analysis and immunofluorescence. Nine antibodies were speci...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(89)90091-9

    authors: Bhavani K,Karande AA,Shaila MS

    更新日期:1989-04-01 00:00:00

  • Detection and identification of vaccine-related polioviruses by the polymerase chain reaction.

    abstract::We have used the polymerase chain reaction (PCR) to obtain sensitive detection and identification of poliovirus RNA genomes. Primer pairs were designed to permit identification of each Sabin poliovaccine strain by the electrophoretic mobilities of the amplified DNA products (Sabin 1: 97 bp; Sabin 2: 71 bp; Sabin 3: 44...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(91)90107-7

    authors: Yang CF,De L,Holloway BP,Pallansch MA,Kew OM

    更新日期:1991-07-01 00:00:00

  • Elevated antigen-specific Th2 type response is associated with the poor prognosis of hand, foot and mouth disease.

    abstract::The immunopathogenesis of severe hand, foot and mouth disease (HFMD) remains elusive. This study revealed that enterovirus 71 (EV71) epitope-specific CD4+ T cell responses of HFMD patients were skewed toward a Th2 cytokine profile. Patients that demonstrated higher levels of IL-4 expression in their CD4 T cells follow...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2013.07.009

    authors: Wei R,Xu L,Zhang N,Zhu K,Yang J,Yang C,Deng C,Zhu Z,De Groot AS,Altmeyer R,Zeng M,Leng Q

    更新日期:2013-10-01 00:00:00

  • A novel target-specific gene delivery system combining baculovirus and sequence-specific long interspersed nuclear elements.

    abstract::Transposable elements are valuable for somatic and germ-line transformation. However, long interspersed nuclear elements (LINEs) have not been used because of poor information on the transposition mechanism. We have developed a novel gene delivery system combining baculovirus AcNPV and two silkworm LINEs, SART1 and R1...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2007.03.014

    authors: Kawashima T,Osanai M,Futahashi R,Kojima T,Fujiwara H

    更新日期:2007-07-01 00:00:00

  • Synthetic prions and other human neurodegenerative proteinopathies.

    abstract::Transmissible spongiform encephalopathies (TSE) are a heterogeneous group of neurodegenerative disorders. The common feature of these diseases is the pathological conversion of the normal cellular prion protein (PrP(C)) into a β-structure-rich conformer-termed PrP(Sc). The latter can induce a self-perpetuating process...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2014.10.020

    authors: Le NT,Narkiewicz J,Aulić S,Salzano G,Tran HT,Scaini D,Moda F,Giachin G,Legname G

    更新日期:2015-09-02 00:00:00

  • The neutralization of pseudorabies virus by anti-alpha-galactocyl natural antibody in normal serum.

    abstract::Pseudorabies virus (PrV), a member of herpesviridae alphaherpes subfamily, can infect human cells in vitro. However, the transmission to Old World primates including humans is strongly restricted. In this study, we report the neutralizing activity of normal human serum against PrV grown in CPK cells derived from pig. ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2003.09.008

    authors: Hayashi S,Ogawa S,Takashima Y,Otsuka H

    更新日期:2004-01-01 00:00:00

  • VP6 capsid protein of chicken rotavirus strain CH2: sequence, phylogeny and in silico antigenic analyses.

    abstract::The inner capsid protein VP6 of group A rotavirus possesses group and subgroup epitope specificities. Avian rotaviruses have a unique VP6 that is antigenically different from its mammalian counterpart. The lack of information on the VP6 protein of chicken rotavirus strain, CH2, at the genetic and antigenic level was a...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2008.07.008

    authors: Buragohain M,Cherian SS,Prabhakar G,Chitambar SD

    更新日期:2008-11-01 00:00:00

  • Comparing PreXMRV-2 gag sequence diversity in laboratory and wild mice using deep sequencing.

    abstract::It has recently been reported that the xenotropic murine leukemia virus-related virus (XMRV) derives from a laboratory recombinant. However, sequences with characteristics of the 5' half of XMRV (termed PreXMRV-2) have been identified in several laboratory mouse genomes and cell lines suggesting parts of the XMRV geno...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2012.06.026

    authors: Mayer J,Mazzoni CJ,Greenwood AD

    更新日期:2012-10-01 00:00:00

  • Host-pathogen interactions during porcine reproductive and respiratory syndrome virus 1 infection of piglets.

    abstract::Porcine reproductive and respiratory syndrome (PRRS) is a major disease affecting pigs worldwide and resulting in considerable economic losses. While PRRS is a global phenomenon, the causative viruses PRRSV-1 (first detected in Europe) and PRRSV-2 (isolated in North America) are genetically and biologically distinct. ...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2014.12.026

    authors: Salguero FJ,Frossard JP,Rebel JM,Stadejek T,Morgan SB,Graham SP,Steinbach F

    更新日期:2015-04-16 00:00:00

  • The DHODH inhibitor PTC299 arrests SARS-CoV-2 replication and suppresses induction of inflammatory cytokines.

    abstract::The coronavirus disease 2019 (COVID-19) pandemic has created an urgent need for therapeutics that inhibit the SARS-COV-2 virus and suppress the fulminant inflammation characteristic of advanced illness. Here, we describe the anti-COVID-19 potential of PTC299, an orally bioavailable compound that is a potent inhibitor ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.198246

    authors: Luban J,Sattler RA,Mühlberger E,Graci JD,Cao L,Weetall M,Trotta C,Colacino JM,Bavari S,Strambio-De-Castillia C,Suder EL,Wang Y,Soloveva V,Cintron-Lue K,Naryshkin NA,Pykett M,Welch EM,O'Keefe K,Kong R,Goodwin E,Jac

    更新日期:2021-01-15 00:00:00

  • Humoral and cell-mediated immune responses to plant-produced African horse sickness virus VP7 quasi-crystals.

    abstract::African horse sickness (AHS) is a devastating viral disease affecting equines and has resulted in many disastrous epizootics. To date, no successful therapeutic treatment exists for AHS, and commercially used live-attenuated vaccines have various undesirable side effects. Previous studies have shown that mice inoculat...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2020.198284

    authors: Fearon SH,Dennis SJ,Hitzeroth II,Rybicki EP,Meyers AE

    更新日期:2021-01-06 00:00:00

  • Genetic and serotypic characterization of Sin Nombre-like viruses in Canadian Peromyscus maniculatus mice.

    abstract::In Canada, hantavirus infected deer mice (Peromyscus maniculatus) have been collected from British Columbia to Newfoundland. Partial sequencing of G1 and N protein encoding regions from Canadian Peromyscus maniculatus-borne hantaviruses demonstrated the existence of significant genotypic divergence among strains. Phyl...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(01)00227-1

    authors: Drebot MA,Gavrilovskaya I,Mackow ER,Chen Z,Lindsay R,Sanchez AJ,Nichol ST,Artsob H

    更新日期:2001-05-01 00:00:00

  • Porcine circovirus type 2 and its associated diseases in Korea.

    abstract::This review describes the characterization of porcine circovirus type 2 (PCV2), the field situation of porcine circovirus-associated disease (PCVAD) and the PCV2 vaccine in Korea. PCVAD has been considered the most devastating disease in Korean livestock history since its first outbreak in 1999. Postweaning multisyste...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2011.10.013

    authors: Chae C

    更新日期:2012-03-01 00:00:00

  • Conditional gene expression in hepatitis C virus transgenic mice without induction of severe liver injury using a non-inflammatory Cre-expressing adenovirus.

    abstract::We previously established inducible-hepatitis C virus (HCV) transgenic mice, which expressed the HCV gene (nucleotides 294-3435) encoding the core, E1, E2, and NS2 proteins. The expression of these proteins is regulated by the Cre/loxP system and an adenovirus vector (AdV) that expresses Cre DNA recombinase (Cre) cont...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2011.05.019

    authors: Chiyo T,Sekiguchi S,Hayashi M,Tobita Y,Kanegae Y,Saito I,Kohara M

    更新日期:2011-09-01 00:00:00

  • Genetic manipulation of two fowlpox virus late transcriptional regulatory elements influences their ability to direct expression of foreign genes.

    abstract::Fowlpox virus (FWPV) is currently used as a vector to express foreign genes of various poultry and mammalian pathogens. However, due to limited information available about the primary structure of FWPV promoters required for an optimal transcriptional efficiency, the full potential of FWPV as an expression vector has ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2005.08.017

    authors: Srinivasan V,Schnitzlein WM,Tripathy DN

    更新日期:2006-03-01 00:00:00

  • The avian and mammalian host range of highly pathogenic avian H5N1 influenza.

    abstract::Highly pathogenic H5N1 influenza viruses have been isolated from a number of avian and mammalian species. Despite intensive control measures the number of human and animal cases continues to increase. A more complete understanding of susceptible species and of contributing environmental and molecular factors is crucia...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2013.09.004

    authors: Kaplan BS,Webby RJ

    更新日期:2013-12-05 00:00:00

  • Role of SUMOylation in Human Oncogenic Herpesvirus Infection.

    abstract::Post-translational modification of target proteins by the Small Ubiquitin-like Modifier (SUMO) plays a critical role in regulation of many cellular processes including transcription, RNA processing, protein trafficking, DNA repair, and chromosome segregation, and is also often hijacked by viral infections. Epstein-Bar...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2020.197962

    authors: Zhang Y,Wang Y,Zhu C,Robertson ES,Cai Q

    更新日期:2020-07-02 00:00:00

  • Molecular relationships in infectious pancreatic necrosis virus.

    abstract::Infectious pancreatic necrosis virus (IPNV), a Birnaviridae with a double-stranded RNA genome of two segments, is an important aquatic pathogen. Previous characterizations of the RNA and polypeptide patterns of different IPNV isolates have uncovered a wide variety of electropherotypes. We used RNA fingerprinting analy...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(95)00035-o

    authors: Hsu YL,Chen CC,Wu JL

    更新日期:1995-08-01 00:00:00

  • The victorivirus Helminthosporium victoriae virus 190S is the primary cause of disease/hypovirulence in its natural host and a heterologous host.

    abstract::A transmissible disease of the plant pathogenic fungus Helminthosporium victoriae, the causal agent of Victoria blight of oats, was reported more than 50 years ago. Diseased, but not normal, isolates, of H. victoriae contain two distinct viruses designated according to their sedimentation values as victorivirus Helmin...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2015.12.011

    authors: Xie J,Havens WM,Lin YH,Suzuki N,Ghabrial SA

    更新日期:2016-02-02 00:00:00

  • The evolution of subtype B HIV-1 tat in the Netherlands during 1985-2012.

    abstract::For the production of viral genomic RNA, HIV-1 is dependent on an early viral protein, Tat, which is required for high-level transcription. The quantity of viral RNA detectable in blood of HIV-1 infected individuals varies dramatically, and a factor involved could be the efficiency of Tat protein variants to stimulate...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2018.04.008

    authors: van der Kuyl AC,Vink M,Zorgdrager F,Bakker M,Wymant C,Hall M,Gall A,Blanquart F,Berkhout B,Fraser C,Cornelissen M,BEEHIVE Collaboration.

    更新日期:2018-05-02 00:00:00

  • The influenza C virus NS gene: evidence for a spliced mRNA and a second NS gene product (NS2 protein).

    abstract::It has previously been shown that the shortest RNA (RNA 7) of influenza C viruses codes for a nonstructural (NSI) protein (Nakada et al. (1985) J. Virol. 56, 221-226). Experiments reported here indicate that RNA 7 also directs the synthesis of a second nonstructural protein via a spliced mRNA. The amino terminal 62 co...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(86)90005-5

    authors: Nakada S,Graves PN,Palese P

    更新日期:1986-05-01 00:00:00

  • Purification and in vitro-phospholabeling of secretory envelope proteins E1 and E2 of hepatitis C virus expressed in insect cells.

    abstract::The putative envelope glycoproteins of hepatitis C virus (HCV), E1 and E2, were expressed as recombinant, secretory proteins in Sf9 insect cells through infection with recombinant baculoviruses. The influenza virus hemagglutinin signal sequence (HASS) was inserted upstream of the HCV-cDNAs in order to effect secretion...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/0168-1702(96)01365-2

    authors: Hüssy P,Schmid G,Mous J,Jacobsen H

    更新日期:1996-11-01 00:00:00

  • The molecular epidemiology of rabies associated with chiropteran hosts in Mexico.

    abstract::While large-scale dog vaccination campaigns have significantly reduced urban rabies throughout Mexico, reports of sylvatic rabies, including cases of spill-over of bat strains into livestock and humans, are increasing. To improve knowledge of these epidemiological trends, 64 Mexican rabies virus isolates from various ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2005.10.006

    authors: Nadin-Davis SA,Loza-Rubio E

    更新日期:2006-05-01 00:00:00

  • Post translational modifications of recombinant human papillomavirus type 6b major capsid protein.

    abstract::We have determined the post-translational modifications of the major capsid protein, L1 of human papillomavirus (HPV) type 6b. Since this virus cannot be cultured in the laboratory to obtain sufficient material for a study, a recombinant L1 protein produced in a vaccinia virus expression system was used in this invest...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/s0168-1702(98)00117-8

    authors: Fang NX,Frazer IH,Zhou J,Fernando GJ

    更新日期:1999-04-01 00:00:00

  • Genetic and antigenic characterization of the Amur virus associated with hemorrhagic fever with renal syndrome.

    abstract::The genetic and antigenic characteristics of the Amur (AMR) and Far East (FE) virus lineages, which are both within the genus Hantavirus, were studied. Representative viruses, H5 and B78 for AMR and Bao 14 for FE, were used. The entire small (S) and medium (M) segments, except for the 3'- and 5'-ends, were sequenced. ...

    journal_title:Virus research

    pub_type: 杂志文章

    doi:10.1016/j.virusres.2003.12.031

    authors: Lokugamage K,Kariwa H,Lokugamage N,Miyamoto H,Iwasa M,Hagiya T,Araki K,Tachi A,Mizutani T,Yoshimatsu K,Arikawa J,Takashima I

    更新日期:2004-05-01 00:00:00

  • Polymerases of paramyxoviruses and pneumoviruses.

    abstract::The paramyxo- and pneumoviruses are members of the order Mononegavirales, a group of viruses with non-segmented, negative strand RNA genomes. The polymerases of these viruses are multi-functional complexes, capable of transcribing subgenomic capped and polyadenylated mRNAs and replicating the genome. Although there is...

    journal_title:Virus research

    pub_type: 杂志文章,评审

    doi:10.1016/j.virusres.2017.01.008

    authors: Fearns R,Plemper RK

    更新日期:2017-04-15 00:00:00