The Microcirculation Physiome Project.

Abstract:

:Presented is a discussion of steps towards the creation of a database of the microcirculation encompassing anatomical and functional experimental data, and conceptual and computational models. The discussion includes issues of database utility, organization, data deposition, and linkage to other databases. The database will span levels from gene to tissue and will serve both research and educational purposes.

journal_name

Ann Biomed Eng

authors

Popel AS,Greene AS,Ellis CG,Ley KF,Skalak TC,Tonellato PJ

doi

10.1114/1.112

subject

Has Abstract

pub_date

1998-11-01 00:00:00

pages

911-3

issue

6

eissn

0090-6964

issn

1573-9686

journal_volume

26

pub_type

  • Models of flow-induced loading on blood cells in laminar and turbulent flow, with application to cardiovascular device flow.

    abstract::Viscous shear stress and Reynolds stress are often used to predict hemolysis and thrombosis due to flow-induced stress on blood elements in cardiovascular devices. These macroscopic stresses are distinct from the true stress on an individual cell, which is determined by the local microscale flow field. In this paper t...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-007-9308-8

    authors: Quinlan NJ,Dooley PN

    更新日期:2007-08-01 00:00:00

  • Dynamic details of disparity convergence eye movements.

    abstract::Classically, the primary tool for quantifying the dynamics of vergence and other eye movements has been the main sequence. The main sequence is a plot of peak velocity versus response amplitude and is particularly useful for comparing the dynamics of a large number of eye movements over a range of response amplitudes....

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1114/1.162

    authors: Alvarez TL,Semmlow JL,Yuan W,Munoz P

    更新日期:1999-05-01 00:00:00

  • Degradation, bioactivity, and osteogenic potential of composites made of PLGA and two different sol-gel bioactive glasses.

    abstract::We have developed poly(L: -lactide-co-glycolide) (PLGA) based composites using sol-gel derived bioactive glasses (S-BG), previously described by our group, as composite components. Two different composite types were manufactured that contained either S2-high content silica S-BG, or A2-high content lime S-BG. The compo...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-011-0307-4

    authors: Pamula E,Kokoszka J,Cholewa-Kowalska K,Laczka M,Kantor L,Niedzwiedzki L,Reilly GC,Filipowska J,Madej W,Kolodziejczyk M,Tylko G,Osyczka AM

    更新日期:2011-08-01 00:00:00

  • Strength and electron features of irradiated bone.

    abstract::Radiation applied for therapy and diagnostics damages molecular/atomic couples of biotissues, bones being among them. As a result, electron peculiarities and mechanical behavior of the latter are altered. Correlation between strength of the irradiated bone and its electron features explored due to photo- and exoelectr...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章,评审

    doi:10.1114/1.1424911

    authors: Dekhtyar Y

    更新日期:2001-12-01 00:00:00

  • Efficient dielectrophoretic patterning of embryonic stem cells in energy landscapes defined by hydrogel geometries.

    abstract::In this study, we have developed an integrated microfluidic platform for actively patterning mammalian cells, where poly(ethylene glycol) (PEG) hydrogels play two important roles as a non-fouling layer and a dielectric structure. The developed system has an embedded array of PEG microwells fabricated on a planar indiu...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-010-0108-1

    authors: Tsutsui H,Yu E,Marquina S,Valamehr B,Wong I,Wu H,Ho CM

    更新日期:2010-12-01 00:00:00

  • Physiological acoustic sensing based on accelerometers: a survey for mobile healthcare.

    abstract::This paper reviews the applications of accelerometers on the detection of physiological acoustic signals such as heart sounds, respiratory sounds, and gastrointestinal sounds. These acoustic signals contain a rich reservoir of vital physiological and pathological information. Accelerometer-based systems enable continu...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章,评审

    doi:10.1007/s10439-014-1111-8

    authors: Hu Y,Kim EG,Cao G,Liu S,Xu Y

    更新日期:2014-11-01 00:00:00

  • Strontium ranelate prevents bone loss in a rat model of localized muscle paralysis.

    abstract::Twenty-one 3.5-month-old female Sprague-Dawley rats were randomly assigned to three groups: BTX group, in which each rat received a single intramuscular injection of 2 U of Clostridium botulinum toxin (BTX) in the quadriceps femoris muscle of the right hind limb; BTX + SR group, in which each rat received a BTX inject...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-011-0406-2

    authors: Sheng ZF,Ma YL,Tong D,Fang DY,Liang QC,Liu LH,Zhang J,Liao EY

    更新日期:2012-03-01 00:00:00

  • The effects of anisotropy on the stress analyses of patient-specific abdominal aortic aneurysms.

    abstract::The local dilation of the infrarenal abdominal aorta, termed an abdominal aortic aneurysm (AAA), is often times asymptomatic and may eventually result in rupture-an event associated with a significant mortality rate. The estimation of in-vivo stresses within AAAs has been proposed as a useful tool to predict the likel...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-008-9490-3

    authors: Vande Geest JP,Schmidt DE,Sacks MS,Vorp DA

    更新日期:2008-06-01 00:00:00

  • A novel approach to track fetal movement using multi-sensor magnetocardiographic recordings.

    abstract::Changes in fetal magnetocardiographic (fMCG) signals are indicators for fetal body movement. We propose a novel approach to reliably extract fetal body movements based on the field strength of the fMCG signal independent of its frequency. After attenuating the maternal MCG, we use a Hilbert transform approach to ident...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-010-0231-z

    authors: Govindan RB,Vairavan S,Ulusar UD,Wilson JD,McKelvey SS,Preissl H,Eswaran H

    更新日期:2011-03-01 00:00:00

  • Organ Dynamics and Fluid Dynamics of the HH25 Chick Embryonic Cardiac Ventricle as Revealed by a Novel 4D High-Frequency Ultrasound Imaging Technique and Computational Flow Simulations.

    abstract::Past literature has provided evidence that a normal mechanical force environment of blood flow may guide normal development while an abnormal environment can lead to congenital malformations, thus warranting further studies on embryonic cardiovascular flow dynamics. In the current study, we developed a non-invasive 4D...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-017-1882-9

    authors: Ho S,Tan GXY,Foo TJ,Phan-Thien N,Yap CH

    更新日期:2017-10-01 00:00:00

  • Transport Analysis of Engineered Liver Tissue Fabricated Using a Capsule-Based, Modular Approach.

    abstract::The bioinspired, microscale tissue engineering approach has emerged in recent years as a promising alternative to preformed scaffolds. Using this approach, complex tissues and organs can be efficiently engineered from microscale modules to replicate the intricate architecture and physiology of vascularized organs and ...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-018-02192-y

    authors: Annamalai RT,Matthew HWT

    更新日期:2019-05-01 00:00:00

  • Preparation of chitosan/hydroxyapatite substrates with controllable osteoconductivity tracked by AFM.

    abstract::In this study, cell-material adhesive strength and cellular mechanical properties were measured using atomic force microscopy (AFM) to track cell attachment and osteogenic differentiation. First, chitosan substrates were treated with simulated body fluid (SBF) for various periods, resulting in substrates with differen...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-014-1162-x

    authors: Ho MH,Li CH,Hsiao SW,Thien DV

    更新日期:2015-04-01 00:00:00

  • Vascular remodeling in autogenous arterio-venous fistulas by MRI and CFD.

    abstract::Hemodynamic parameters play an important role in regulating vascular remodeling in arterio-venous fistula (AVF) maturation. Investigating the changes in hemodynamic parameters during AVF maturation is expected to improve our understanding of fistula failure, but very little data on actual temporal changes in human AVF...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-012-0703-4

    authors: Sigovan M,Rayz V,Gasper W,Alley HF,Owens CD,Saloner D

    更新日期:2013-04-01 00:00:00

  • Net change in periosteal strain during stance shift loading after surgery correlates to rapid de novo bone generation in critically sized defects.

    abstract::In an ovine femur model, proliferative woven bone fills critically sized defects enveloped by periosteum within 2 weeks of treatment with the one-stage bone-transport surgery. We hypothesize that mechanical loading modulates this process. Using high-definition optical strain measurements we determined prevailing perio...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-010-0242-9

    authors: McBride SH,Dolejs S,Brianza S,Knothe U,Knothe Tate ML

    更新日期:2011-05-01 00:00:00

  • Conductance method for the measurement of cross-sectional areas of the aorta.

    abstract::A modified conductance method to determine the cross-sectional areas (CSAs) of arteries in piglets was evaluated in vivo. The method utilized a conductance catheter having four electrodes. Between the outer electrodes an alternating current was applied and between the inner electrodes the induced voltage difference wa...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1114/1.219

    authors: Kornet L,Jansen JR,Gussenhoven EJ,Hardeman MR,Hoeks AP,Versprille A

    更新日期:1999-03-01 00:00:00

  • The effect of head rotation on the geometry and hemodynamics of healthy vertebral arteries.

    abstract::The geometric and hemodynamic characteristics of the left and right vertebral arteries (LVA, RVA) of six healthy volunteers were investigated for the supine (S) and the prone position (P) a common sleeping posture with head rotation. MRI images were used to reconstruct the subject specific three-dimensional solid mode...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-015-1340-5

    authors: Aristokleous N,Seimenis I,Georgiou GC,Nicolaides A,Anayiotos AS

    更新日期:2015-06-01 00:00:00

  • Effects of tetraethylammonium on Kx channels and simulated light response in rod photoreceptors.

    abstract::Rod photoreceptors express a unique type of noninactivating potassium channels, Kx channels, which play an important role in setting the dark potential and participate in shaping the light response. Biophysical studies of Kx channels are limited. For example, the effects of a conventional blocker of potassium channels...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1114/b:abme.0000042230.99614.8d

    authors: Liu XD,Kourennyi DE

    更新日期:2004-10-01 00:00:00

  • Generalized sensitivity functions in physiological system identification.

    abstract::Parameters of physiological models are commonly associated in an input-output experiment with a specific pattern of the system response. This association is often made on an intuitive basis by traditional sensitivity analysis, i.e., by inspecting the variations of model output trajectories with respect to parameter va...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1114/1.207

    authors: Thomaseth K,Cobelli C

    更新日期:1999-09-01 00:00:00

  • Parametric comparisons of intracranial mechanical responses from three validated finite element models of the human head.

    abstract::A number of human head finite element (FE) models have been developed from different research groups over the years to study the mechanisms of traumatic brain injury. These models can vary substantially in model features and parameters, making it important to evaluate whether simulation results from one model are read...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-013-0907-2

    authors: Ji S,Ghadyani H,Bolander RP,Beckwith JG,Ford JC,McAllister TW,Flashman LA,Paulsen KD,Ernstrom K,Jain S,Raman R,Zhang L,Greenwald RM

    更新日期:2014-01-01 00:00:00

  • Parametric Design Optimisation of Proximal Humerus Plates Based on Finite Element Method.

    abstract::Optimal treatment of proximal humerus fractures remains controversial. Locking plates offer theoretical advantages but are associated with complications in the clinic. This study aimed to perform parametric design optimisation of proximal humerus plates to enhance their mechanical performance. A finite element (FE) mo...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-018-02160-6

    authors: Jabran A,Peach C,Zou Z,Ren L

    更新日期:2019-02-01 00:00:00

  • Reduced parameter formulation for incorporating fiber level viscoelasticity into tissue level biomechanical models.

    abstract::Collagen is known to be a viscoelastic material and therefore is an important source of time dependent behavior in soft tissue. Though there are material models for soft tissue that rely on properties and structure of constituent collagen fibers, such models generally utilize only the elastic properties of collagen, a...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-006-9124-6

    authors: Bischoff JE

    更新日期:2006-07-01 00:00:00

  • Automatic Detection of Contracting Muscle Regions via the Deformation Field of Transverse Ultrasound Images: A Feasibility Study.

    abstract::Accurate identification of contracting muscles can help us to understand the muscle function in both physiological and pathological conditions. Conventional electromyography (EMG) have limited access to deep muscles, crosstalk, or instability in the recordings. Accordingly, a novel framework was developed to detect co...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-020-02557-2

    authors: Zheng Y,Shin H,Kamper DG,Hu X

    更新日期:2021-01-01 00:00:00

  • Continuous blood density measurement for hemodynamic monitoring: an analysis of its accuracy and sensitivity.

    abstract::Continuous measurement of arterial blood density after bolus injection of fluids of different density into the right atrium has been used to measure cardiac output and mean transit time through the central circulation. The transit time distribution for density, however, differs from that for plasma-phase tracers such ...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/BF02368628

    authors: Ligas JR,Moslehi F,Epstein MA

    更新日期:1993-07-01 00:00:00

  • MUlti-Dimensional Spline-Based Estimator (MUSE) for motion estimation: algorithm development and initial results.

    abstract::Image registration and motion estimation play central roles in many fields, including RADAR, SONAR, light microscopy, and medical imaging. Because of its central significance, estimator accuracy, precision, and computational cost are of critical importance. We have previously presented a highly accurate, spline-based ...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-008-9564-2

    authors: Viola F,Coe RL,Owen K,Guenther DA,Walker WF

    更新日期:2008-12-01 00:00:00

  • Biomechanical Characterisation of the Human Auricular Cartilages; Implications for Tissue Engineering.

    abstract::Currently, autologous cartilage provides the gold standard for auricular reconstruction. However, synthetic biomaterials offer a number of advantages for ear reconstruction including decreased donor site morbidity and earlier surgery. Critical to implant success is the material's mechanical properties as this affects ...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-016-1688-1

    authors: Griffin MF,Premakumar Y,Seifalian AM,Szarko M,Butler PE

    更新日期:2016-12-01 00:00:00

  • Quantification of rigidity in Parkinson's disease.

    abstract::In this paper, a new method for quantification of rigidity in elbow joint of Parkinsonian patients is introduced. One of the most known syndromes in Parkinson's disease (PD) is increased passive stiffness in muscles, which leads to rigidity in joints. Clinical evaluation of stiffness in wrist and/or elbow, commonly us...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-007-9379-6

    authors: Sepehri B,Esteki A,Ebrahimi-Takamjani E,Shahidi GA,Khamseh F,Moinodin M

    更新日期:2007-12-01 00:00:00

  • A Battery-Powered Ankle Exoskeleton Improves Gait Mechanics in a Feasibility Study of Individuals with Cerebral Palsy.

    abstract::Neuromuscular impairment associated with cerebral palsy (CP) often leads to life-long walking deficits. Our goal was to evaluate the ability of a novel untethered wearable ankle exoskeleton to reduce the severity of gait pathology from CP. In this clinical feasibility study of five individuals with CP, we used instrum...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-019-02237-w

    authors: Lerner ZF,Harvey TA,Lawson JL

    更新日期:2019-06-01 00:00:00

  • A Fluorescence Sensing Method with Reduced DNA Typing and Low-Cost Instrumentation for Detection of Sample Tampering Cases in Urinalysis.

    abstract::This work presents a method to unequivocally detect urine sample tampering in cases where integrity of the sample needs to be verified prior to urinalysis. The technique involves the detection of distinct patterns of a triplex short tandem repeats system in DNA extracted from human urine. The analysis is realized with...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-019-02386-y

    authors: Pires NMM,Dong T,Yang Z,Santos SMB

    更新日期:2020-02-01 00:00:00

  • MEG connectivity analysis in patients with Alzheimer's disease using cross mutual information and spectral coherence.

    abstract::Alzheimer's disease (AD) is an irreversible brain disorder which represents the most common form of dementia in western countries. An early and accurate diagnosis of AD would enable to develop new strategies for managing the disease; however, nowadays there is no single test that can accurately predict the development...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-010-0155-7

    authors: Alonso JF,Poza J,Mañanas MA,Romero S,Fernández A,Hornero R

    更新日期:2011-01-01 00:00:00

  • A novel left heart simulator for the multi-modality characterization of native mitral valve geometry and fluid mechanics.

    abstract::Numerical models of the mitral valve have been used to elucidate mitral valve function and mechanics. These models have evolved from simple two-dimensional approximations to complex three-dimensional fully coupled fluid structure interaction models. However, to date these models lack direct one-to-one experimental val...

    journal_title:Annals of biomedical engineering

    pub_type: 杂志文章

    doi:10.1007/s10439-012-0651-z

    authors: Rabbah JP,Saikrishnan N,Yoganathan AP

    更新日期:2013-02-01 00:00:00