Microbial production of diols as platform chemicals: recent progresses.

Abstract:

:Diols are chemicals with two hydroxyl groups which have a wide range of appealing applications as chemicals and fuels. In particular, four diol compounds, namely 1,3-propanediol (1,3-PDO), 1,2-propanediol (1,2-PDO), 2,3-butanediol (2,3-BDO) and 1,4-butanediol (1,4-BDO) can be biotechnologically produced by direct microbial bioconversion of renewable materials. These diols are considered as platform green chemicals. We review and discuss here the recent development in the microbial production of these diols, especially regarding the engineering of production strains and optimization of the fermentation processes.

journal_name

Curr Opin Biotechnol

authors

Zeng AP,Sabra W

doi

10.1016/j.copbio.2011.05.005

subject

Has Abstract

pub_date

2011-12-01 00:00:00

pages

749-57

issue

6

eissn

0958-1669

issn

1879-0429

pii

S0958-1669(11)00092-9

journal_volume

22

pub_type

杂志文章,评审
  • Particle bombardment: a universal approach for gene transfer to cells and tissues.

    abstract::In the past year, significant progress in the field of gene transfer has been made possible by refinement of the technique of particle bombardment. The process has been utilized for the study of gene expression in plastids and mitochondria, the production of transgenic crop plants and gene transfer into live animals. ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0958-1669(93)90081-7

    authors: Klein TM,Fitzpatrick-McElligott S

    更新日期:1993-10-01 00:00:00

  • Acquisition and use of calorimetric data for prediction of the thermodynamics of ligand-binding and folding reactions of proteins.

    abstract::The commercialization of high-precision microcalorimeters has led to a sharp increase in the acquisition and utilization of calorimetric data on the binding and folding reactions of proteins. This thermodynamic database, together with high-resolution structures of proteins and their complexes with ligands, has facilit...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0958-1669(94)90046-9

    authors: Connelly PR

    更新日期:1994-08-01 00:00:00

  • Cranberry components for the therapy of infectious disease.

    abstract::Summary of the in vitro data support a beneficial effect of cranberry or its proanthocyanin constituents by blocking adhesion to and biofilm formation on target tissues of pathogens. In vivo data partially support these beneficial effects. Consumption of various cranberry products benefited young and elderly females i...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.10.009

    authors: Shmuely H,Ofek I,Weiss EI,Rones Z,Houri-Haddad Y

    更新日期:2012-04-01 00:00:00

  • Advances in monitoring environmental microbes.

    abstract::Culture-independent approaches, such as next-generation sequencing and microarray-based tools, provide insight into the identity and functional diversity of microbial communities. Although these approaches are potentially powerful tools in understanding microbial structure and function, there are a number of limitatio...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.10.020

    authors: Hazen TC,Rocha AM,Techtmann SM

    更新日期:2013-06-01 00:00:00

  • The genome editing toolbox: a spectrum of approaches for targeted modification.

    abstract::The increase in quality, quantity, and complexity of recombinant products heavily drives the need to predictably engineer model and complex (mammalian) cell systems. However, until recently, limited tools offered the ability to precisely manipulate their genomes, thus impeding the full potential of rational cell line ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.06.005

    authors: Cheng JK,Alper HS

    更新日期:2014-12-01 00:00:00

  • Protein design in metabolic engineering and synthetic biology.

    abstract::Starting from experimental data on sequence, structure or biochemical properties of enzymes, protein design seeks to construct enzymes with desired activity, stability, specificity and selectivity. Two strategies are widely used to investigate sequence-structure-function relationships: statistical methods to analyse p...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.03.004

    authors: Pleiss J

    更新日期:2011-10-01 00:00:00

  • Opportunities toward hydrogen production biotechnologies.

    abstract::Hydrogen is already a major commodity and process intermediate for fertilizer production, petroleum processing, and chemical synthesis. It also offers unrealized potential for energy storage. While biological production offers an expandable and sustainable source, enthusiasm has been dampened by slow research progress...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2020.03.002

    authors: Swartz J

    更新日期:2020-04-01 00:00:00

  • Road to precision: recombinase-based targeting technologies for genome engineering.

    abstract::In the past years, recombinase-based approaches for integrating transgenes into defined chromosomal loci of mammalian cells have gained increasing attention. This method is attractive since it enables to precisely integrate transgenes of interest into pre-defined integration sites, thereby allowing to predict the expr...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2007.07.013

    authors: Wirth D,Gama-Norton L,Riemer P,Sandhu U,Schucht R,Hauser H

    更新日期:2007-10-01 00:00:00

  • Molecular and biotechnological approaches to fish vaccines.

    abstract::Global aquaculture is projected to grow from 10 million to 20 million metric tons by the year 2000. To meet this projection, the aquaculture industry must bring some of its infectious disease problems under control without relying on antibiotics and chemotherapeutics. Thus, vaccines for fish and shellfish are being so...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0958-1669(93)90097-g

    authors: Leong JA

    更新日期:1993-06-01 00:00:00

  • Recent advances in single-cell studies of gene regulation.

    abstract::A mechanistic understanding of gene regulatory network dynamics requires quantitative single-cell data of multiple network components in response to well-defined perturbations. Recent advances in the development of fluorescent biomarkers for proteins, detection of RNA and interactions, microfluidic technology, and hig...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.11.006

    authors: Selimkhanov J,Hasty J,Tsimring LS

    更新日期:2012-02-01 00:00:00

  • High-density gridding: techniques and applications.

    abstract::Much progress has been made in the development of techniques for constructing dense grids either of ligands, such as peptides and oligonucleotides, or of cloned nucleic acids. Such arrays are finding practical applications in the analysis of sequence variation and gene expression. Methods for carrying out large number...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/s0958-1669(96)80100-5

    authors: Southern EM

    更新日期:1996-02-01 00:00:00

  • Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae.

    abstract::Both cyanobacteria and eukaryotic microalgae are promising organisms for sustainable production of bulk products such as food, feed, materials, chemicals and fuels. In this review we will summarize the potential and current biotechnological developments. Cyanobacteria are promising host organisms for the production of...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.04.004

    authors: Wijffels RH,Kruse O,Hellingwerf KJ

    更新日期:2013-06-01 00:00:00

  • Targeting split vaccines to the endosome improves vaccination.

    abstract::Compared to 'live' vaccines, the immunogenicity of 'split' vaccines based on recombinant antigen (Ag) is poor, presumably because exogeneous recombinant Ag fails to efficiently access the major histocompatibility complex (MHC) class I processing pathway needed for 'cross-presentation'. Here we discuss recent evidence ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2004.09.006

    authors: Wagner H,Heit A,Schmitz F,Bauer S

    更新日期:2004-12-01 00:00:00

  • Recent developments of microfluidics as a tool for biotechnology and microbiology.

    abstract::Academic microfluidics has decisively shifted in recent years from the research on phenomenology and proof-of-concept fluidic functionalities to the developments oriented at applications with biology, medicine and biotechnology in prime focus. Significant efforts are made to demonstrate that microfluidics can be used ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2018.08.004

    authors: Scheler O,Postek W,Garstecki P

    更新日期:2019-02-01 00:00:00

  • Biological approaches for controlling shellfish-associated pathogens.

    abstract::As the consumption of seafood and shellfish increases around the world, so is the incidence of associated outbreaks of illness. Various postharvest treatments are effective at killing seafood-associated bacteria, but most of these treatments also kill the mollusks. Because consumer preferences for raw live shellfish p...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.copbio.2009.03.001

    authors: Teplitski M,Wright AC,Lorca G

    更新日期:2009-04-01 00:00:00

  • Challenges in discovering bioactives for the food industry.

    abstract::Nutritional interventions are associated with transient deviations of homeostasis within the human body. The role of a balanced nutrition is, firstly, to ensure an adequate intake of nutrients to efficiently enable all metabolic processes and, secondly, to contribute to sustained human health. This is a new challenge ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2008.02.016

    authors: Schwager J,Mohajeri MH,Fowler A,Weber P

    更新日期:2008-04-01 00:00:00

  • Membrane platforms for biological nanopore sensing and sequencing.

    abstract::In the past two decades, biological nanopores have been developed and explored for use in sensing applications as a result of their exquisite sensitivity and easily engineered, reproducible, and economically manufactured structures. Nanopore sensing has been shown to differentiate between highly similar analytes, meas...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2015.12.015

    authors: Schmidt J

    更新日期:2016-06-01 00:00:00

  • Systems biology approach to bioremediation.

    abstract::Bioremediation has historically been approached as a 'black box' in terms of our fundamental understanding. Thus it succeeds and fails, seldom without a complete understanding of why. Systems biology is an integrated research approach to study complex biological systems, by investigating interactions and networks at t...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.01.015

    authors: Chakraborty R,Wu CH,Hazen TC

    更新日期:2012-06-01 00:00:00

  • Advances in optical detection strategies for reporter signal measurements.

    abstract::Many recent advances in bioreporter technology focus on challenges related to bioengineering, yet in many applications implementation of optical signal measurement is equally susceptible to improvement. For bioluminescent bioreporters, one area of effort lies in the development of semiconductor chip-based detector mod...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2005.12.008

    authors: Wells M

    更新日期:2006-02-01 00:00:00

  • Application of state-of-art sequencing technologies to indigenous food fermentations.

    abstract::Fermented foods and beverages are an integral part of the human diet globally. Understanding the microbial interactions within these fermenting ecosystems is required to deliver safe products with desirable consumer properties, and moreover, maintenance of these traditions. Effective tools are required for documentati...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.08.004

    authors: van Hijum SA,Vaughan EE,Vogel RF

    更新日期:2013-04-01 00:00:00

  • Engineered fatty acid catabolism for fuel and chemical production.

    abstract::Fatty acid oxidation pathways are attractive for metabolic engineering purposes due to their cyclic nature as well as their reactions that allow for the selective functionalization of alkyl chains. These characteristics allow for the production of various chemicals, such as alcohols, alkanes, ketones and hydroxyacids,...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2016.07.004

    authors: Kim S,Cheong S,Chou A,Gonzalez R

    更新日期:2016-12-01 00:00:00

  • Targets for sepsis therapies: tumor necrosis factor versus interleukin-1.

    abstract::Clinical testing of therapies for sepsis that target tumor necrosis factor and interleukin-1 is currently in progress. It is now clear from early clinical results that patients display a heterogeneous response to anti-cytokine therapies that may be related to the stage or severity of disease. Experimental results show...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/0958-1669(93)90055-2

    authors: Russell DA,Thompson RC

    更新日期:1993-12-01 00:00:00

  • Directed evolution: new parts and optimized function.

    abstract::Constructing novel biological systems that function in a robust and predictable manner requires better methods for discovering new functional molecules and for optimizing their assembly in novel biological contexts. By enabling functional diversification and optimization in the absence of detailed mechanistic understa...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2009.08.005

    authors: Dougherty MJ,Arnold FH

    更新日期:2009-08-01 00:00:00

  • The small intestine microbiota, nutritional modulation and relevance for health.

    abstract::The intestinal microbiota plays a profound role in human health and extensive research has been dedicated to identify microbiota aberrations that are associated with disease. Most of this work has been targeting the large intestine and fecal microbiota, while the small intestine microbiota may also have a profound imp...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.09.005

    authors: El Aidy S,van den Bogert B,Kleerebezem M

    更新日期:2015-04-01 00:00:00

  • Techniques for the experimental investigation of the protein corona.

    abstract::Due to its enormous relevance the corona formation of adsorbed proteins around nanoparticles is widely investigated. A comparison of different experimental techniques is given. Direct measurements of proteins, such as typically performed with mass spectrometry, will be compared with indirect analysis, in which instead...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2017.02.009

    authors: Carrillo-Carrion C,Carril M,Parak WJ

    更新日期:2017-08-01 00:00:00

  • Fermentation technologies for the production of probiotics with high viability and functionality.

    abstract::There is growing scientific evidence supported by mechanistic and clinical studies that probiotics can provide health benefits. As probiotics are highly sensitive to many environmental factors, and because the propagation of many strains of intestinal origin is not straightforward, most commercial strains are selected...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2007.02.002

    authors: Lacroix C,Yildirim S

    更新日期:2007-04-01 00:00:00

  • Origin and analysis of microbial population heterogeneity in bioprocesses.

    abstract::Heterogeneity of industrial production cultures is accepted to a certain degree; however, the underlying mechanisms are seldom perceived or included in the development of new bioprocess control strategies. Population heterogeneity and its basics, perceptible in the diverse proficiency of cells, begins with asymmetric ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章

    doi:10.1016/j.copbio.2010.01.002

    authors: Müller S,Harms H,Bley T

    更新日期:2010-02-01 00:00:00

  • Challenges ahead in signal transduction: MAPK as an example.

    abstract::Signal transduction is the process of converting one kind of signal or stimulus into another, with the goal of processing external or internal signals into diverse functions. In recent years, progress has been made in identifying signaling pathways, investigating cross-talk and feedbacks in signaling modules, analyzin...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2011.10.004

    authors: Kiel C,Serrano L

    更新日期:2012-06-01 00:00:00

  • Reconstruction of microbial transcriptional regulatory networks.

    abstract::Although metabolic networks can be readily reconstructed through comparative genomics, the reconstruction of regulatory networks has been hindered by the relatively low level of evolutionary conservation of their molecular components. Recent developments in experimental techniques have allowed the generation of vast a...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2003.11.002

    authors: Herrgård MJ,Covert MW,Palsson BØ

    更新日期:2004-02-01 00:00:00

  • The interplay between microevolution and community structure in microbial populations.

    abstract::The structure of microbial communities is key to their functionality. However, this structure is likely to be influenced by adaptive genetic change in members of the community, which can occur over a matter of days. Changes in community structure can in turn influence the evolutionary trajectories of species within th...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.02.022

    authors: O'Brien S,Hodgson DJ,Buckling A

    更新日期:2013-08-01 00:00:00