Validation of six closely linked STRs located in the chromosome X centromere region.

Abstract:

:We propose that clusters of closely linked markers, which segregate as stable haplotypes, provide a high potential to solve complex kinship cases. It is known that the X-chromosomal centromere region shows an extremely low degree of recombination. Hence, we focused our interest on the region between 56 and 64 Mb distant from the Xp telomere and considered 6 STRs which are now registered in the Genome Data Base as DXS10161, DXS10159, DXS10162, DXS10163, DXS10164, and DXS10165. All of these markers show a tetranucleotide or pentanucleotide structure and exhibit high or medium polymorphic information content. As a peculiarity, DXS10163 is a combination of a pentanucleotide STR and an 18 bp INDEL polymorphism. We report here the primer sequences, the repeat structures, the allele distributions and parameters of forensic interest for a German population sample.

journal_name

Int J Legal Med

authors

Edelmann J,Hering S,Augustin C,Kalis S,Szibor R

doi

10.1007/s00414-009-0328-9

subject

Has Abstract

pub_date

2010-01-01 00:00:00

pages

83-7

issue

1

eissn

0937-9827

issn

1437-1596

journal_volume

124

pub_type

杂志文章
  • Application of the method of Kvaal et al. to digital orthopantomograms.

    abstract::Estimation of age in individuals has received considerable attention in the forensic literature. The reduction of size of dental pulp cavity as a result of secondary dentin deposit with increasing age could be used as an indicator of age. This regression change, apart from morphological techniques, can also be analyse...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-008-0268-9

    authors: Landa MI,Garamendi PM,Botella MC,Alemán I

    更新日期:2009-03-01 00:00:00

  • Forensic features and phylogenetic analyses of Sichuan Han population via 23 autosomal STR loci included in the Huaxia Platinum System.

    abstract::Short tandem repeats (STRs) are DNA regions with a variable number of repeated units (2-6 bp) and attractive to genetic application like forensic, population genetics, and anthropological studies. The Huaxia Platinum System allows the multiplex amplification of 23 autosomal STR loci and two gender determination loci. ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-017-1679-2

    authors: He G,Wang M,Liu J,Hou Y,Wang Z

    更新日期:2018-07-01 00:00:00

  • Allele frequencies of 17 autosomal STR loci in the Va ethnic minority from Yunnan Province, Southwest China.

    abstract::Allele frequencies and forensic parameters for 17 autosomal short tandem repeat (STR) loci were investigated from 1542 individuals of Va ethnic minority in Yunnan Province in the southwest of China. Also, genetic distances between Va and 13 published populations were compared, and a neighbor-joining (NJ) phylogenetic ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-017-1620-8

    authors: Guo F

    更新日期:2017-09-01 00:00:00

  • Superimposition technique for skull identification with Afloat® software.

    abstract::The craniofacial superimposition technique is still an important way of identifying skulls when there is no reference sample for a forensic DNA analysis, when DNA typing from remaining tissue samples has failed, or when antemortem dental records are not available. Through the widespread use of digital photography, the...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-010-0494-9

    authors: Birngruber CG,Kreutz K,Ramsthaler F,Krähahn J,Verhoff MA

    更新日期:2010-09-01 00:00:00

  • Radiographic evaluation of Gustafson's criteria for the purpose of forensic age diagnostics.

    abstract::The main criteria used in dental age estimation in living young individuals are mineralisation and eruption of the third molars. In order to further diversify the spectrum of characteristics after completion of third molar development, tests were undertaken to determine whether the characteristics studied by Gustafson...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-012-0701-y

    authors: Olze A,Hertel J,Schulz R,Wierer T,Schmeling A

    更新日期:2012-07-01 00:00:00

  • Phylogenetic classification of Japanese mtDNA assisted by complete mitochondrial DNA sequences.

    abstract::We investigated control and coding region polymorphisms in mitochondrial DNA (mtDNA) in 100 unrelated individuals from a Japanese population and determined the basal phylogenetic haplogroup lineages in all samples under updated information. Many of the basal phylogenetic haplogroup lineages assigned on East Asian mtDN...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-008-0308-5

    authors: Nohira C,Maruyama S,Minaguchi K

    更新日期:2010-01-01 00:00:00

  • A comparison of 3H-cocaine binding on melanin granules and human hair in vitro.

    abstract::The in vitro experiments on the interaction of 3H-cocaine and melanin from Sepia officinalis confirmed the existence of drug binding sites on melanin granules. The results suggested that the binding of 3H-cocaine to melanin could be analyzed by assuming that the binding to the surface of pigment granules is analogous ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140050031

    authors: Pötsch L,Skopp G,Rippin G

    更新日期:1997-01-01 00:00:00

  • Hand skin reconstruction from skeletal landmarks.

    abstract::Many studies related to three-dimensional facial reconstruction have been previously reported. On the other hand, no extensive work has been found in the literature about hand reconstruction as an identification method. In this paper, the feasibility of virtual reconstruction of hand skin based on (1) its skeleton and...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-007-0204-4

    authors: Lefèvre P,Van Sint Jan S,Beauthier JP,Rooze M

    更新日期:2007-11-01 00:00:00

  • The application of mitochondrial DNA typing to the study of white Caucasian genetic identification.

    abstract::Mitochondrial DNA (mtDNA) from 100 unrelated British White Caucasians was extracted, amplified and directly sequenced. Sequences of approximately 800 nucleotides were obtained from 2 hypervariable segments within the non-coding region of the mitochondrial genome. A total of 91 different sequences were observed with an...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/BF01225046

    authors: Piercy R,Sullivan KM,Benson N,Gill P

    更新日期:1993-01-01 00:00:00

  • Software for Y-haplogroup predictions: a word of caution.

    abstract::The development of online software designed for genetic studies has been exponentially growing, providing numerous benefits to the scientific community. However, they should be used with care, since some require adjustments. The efficiency of two programs for haplogroup prediction was tested with 119 samples of known ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-009-0404-1

    authors: Muzzio M,Ramallo V,Motti JM,Santos MR,López Camelo JS,Bailliet G

    更新日期:2011-01-01 00:00:00

  • The evidential value of STRs. An analysis of exclusion cases.

    abstract::In this study, a total of 191 cases with STR exclusions out of 591 paternity cases were analysed using 2 STR sets, i.e. (set a) 5 STRs in 462 cases with 150 exclusions and (set b) 9 STRs in 129 cases with 41 exclusions. Set (a) was associated with four exclusions on average while set (b) showed five exclusionary loci ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s004140000174

    authors: Brinkmann B,Pfeiffer H,Schürenkamp M,Hohoff C

    更新日期:2001-01-01 00:00:00

  • Genetic study of 12 X-STRs in Malay population living in and around Kuala Lumpur using Investigator Argus X-12 kit.

    abstract::We investigated 12 X-chromosomal short tandem repeat (STR) polymorphisms in 283 unrelated Malay individuals (160 males and 123 females) living in and around Kuala Lumpur using the Investigator Argus X-12 kit. Heterozygosity among the present 12 X-STRs showed a distribution of from 55.3 to 93.5 %. The diversity values ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-012-0705-7

    authors: Samejima M,Nakamura Y,Nambiar P,Minaguchi K

    更新日期:2012-07-01 00:00:00

  • Can the Greulich and Pyle method be used on French contemporary individuals?

    abstract::Forensic age estimation of living individuals has become increasingly important in forensic practice with the constant increase of migration movements to developed countries. The method of Greulich and Pyle is one of the most frequently used methods for age determination. The aim of our study was to verify the reliabi...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-014-1028-7

    authors: Zabet D,Rérolle C,Pucheux J,Telmon N,Saint-Martin P

    更新日期:2015-01-01 00:00:00

  • European council of legal medicine (ECLM) guidelines for the examination of suspected elder abuse.

    abstract::Article 25 of the Charter of Fundamental Rights of the European Union (adopted in Nice on 7 December 2000) recognizes and respects the rights of older people to lead a life of dignity and independence and to participate in social and cultural life. It also highlights the importance of prevention and recognition of eld...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章,实务指引

    doi:10.1007/s00414-018-1880-y

    authors: Keller E,Santos C,Cusack D,Väli M,Ferrara D,Ludes B,Mangin P,Payne-James JJ,Vieira DN

    更新日期:2019-01-01 00:00:00

  • Investigation of phase II metabolism of 11-hydroxy-Δ-9-tetrahydrocannabinol and metabolite verification by chemical synthesis of 11-hydroxy-Δ-9-tetrahydrocannabinol-glucuronide.

    abstract::(-)-Δ-9-tetrahydrocannabinol ((-)-Δ-9-THC) is the main psychoactive constituent in cannabis. During phase I metabolism, it is metabolized to (-)-11-hydroxy-Δ-9-tetrahydrocannabinol ((-)-11-OH-Δ-9-THC), which is psychoactive, and to (-)-11-nor-9-carboxy-Δ-9-tetrahydrocannabinol ((-)-Δ-9-THC-COOH), which is psychoinacti...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-020-02387-w

    authors: Hassenberg C,Clausen F,Hoffmann G,Studer A,Schürenkamp J

    更新日期:2020-11-01 00:00:00

  • A 17-month time course study of human RNA and DNA degradation in body fluids under dry and humid environmental conditions.

    abstract::Blood, saliva, and semen are some of the forensically most relevant biological stains commonly found at crime scenes, which can often be of small size or challenging due to advanced decay. In this context, it is of great importance to possess reliable knowledge about the effects of degradation under different environm...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-016-1373-9

    authors: Sirker M,Schneider PM,Gomes I

    更新日期:2016-11-01 00:00:00

  • Exploring the ancestry differentiation and inference capacity of the 28-plex AISNPs.

    abstract::Inferring an unknown DNA's ancestry using a set of ancestry-informative single nucleotide polymorphisms (SNPs) in forensic science is useful to provide investigative leads. This is especially true when there is no DNA database match or specified suspect. Thus, a set of SNPs with highly robust and balanced differential...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-018-1863-z

    authors: Hao WQ,Liu J,Jiang L,Han JP,Wang L,Li JL,Ma Q,Liu C,Wang HJ,Li CX

    更新日期:2019-07-01 00:00:00

  • Comparative study on the effect of ethnicity on wisdom tooth eruption.

    abstract::The current knowledge base for evaluating the influence of ethnic origin on wisdom tooth eruption is still inadequate. We therefore analyzed and compared the chronology of wisdom tooth eruption in three ethnic populations-German, Japanese, and black South African-based on evidence from 2,482 conventional orthopantomog...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-007-0171-9

    authors: Olze A,van Niekerk P,Ishikawa T,Zhu BL,Schulz R,Maeda H,Schmeling A

    更新日期:2007-11-01 00:00:00

  • First all-in-one diagnostic tool for DNA intelligence: genome-wide inference of biogeographic ancestry, appearance, relatedness, and sex with the Identitas v1 Forensic Chip.

    abstract::When a forensic DNA sample cannot be associated directly with a previously genotyped reference sample by standard short tandem repeat profiling, the investigation required for identifying perpetrators, victims, or missing persons can be both costly and time consuming. Here, we describe the outcome of a collaborative s...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-012-0788-1

    authors: Keating B,Bansal AT,Walsh S,Millman J,Newman J,Kidd K,Budowle B,Eisenberg A,Donfack J,Gasparini P,Budimlija Z,Henders AK,Chandrupatla H,Duffy DL,Gordon SD,Hysi P,Liu F,Medland SE,Rubin L,Martin NG,Spector TD,Kay

    更新日期:2013-05-01 00:00:00

  • New bone post-processing tools in forensic imaging: a multi-reader feasibility study to evaluate detection time and diagnostic accuracy in rib fracture assessment.

    abstract:PURPOSE:The aim of this multi-reader feasibility study was to evaluate new post-processing CT imaging tools in rib fracture assessment of forensic cases by analyzing detection time and diagnostic accuracy. MATERIALS AND METHODS:Thirty autopsy cases (20 with and 10 without rib fractures in autopsy) were randomly select...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-016-1412-6

    authors: Glemser PA,Pfleiderer M,Heger A,Tremper J,Krauskopf A,Schlemmer HP,Yen K,Simons D

    更新日期:2017-03-01 00:00:00

  • Duplication of DYS19 flanking regions in other parts of the Y chromosome.

    abstract::During the testing of alternative primers for the Y chromosome short tandem repeat marker DYS19, a duplicated region of the Y chromosome was discovered. The duplicated sequence is contained within GenBank accession AC006335 and has a high degree of homology with the DYS19 flanking region (GenBank accession AC017019) b...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-004-0436-5

    authors: Butler JM,Schoske R

    更新日期:2004-06-01 00:00:00

  • Different types of structural variation in STRs: HumFES/FPS, HumVWA and HumD21S11.

    abstract::Alleles of the STR systems HumFES/FPS, HumVWA and HumD21S11 were sequenced and analyzed. Sequence data revealed 3 different systems concerning the complexity of their sequence structure. HumFES/FPS belongs to the STR polymorphism with a simple repeat structure. Only 2 subtypes were found with a base substitution in th...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/BF01224779

    authors: Möller A,Meyer E,Brinkmann B

    更新日期:1994-01-01 00:00:00

  • Sudden cardiac death in hereditary hemochromatosis: an underestimated cause of death?

    abstract::Hereditary hemochromatosis (HH) is a frequent autosomal recessive disease which causes iron-overload of various organs. Of all northern European affected individuals, 90-95% show 1 of 3 known point mutations in the HFE gene. Symptoms and organs involved can vary considerably: Only a small fraction of the 200,000-400,0...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-004-0451-6

    authors: Klintschar M,Stiller D

    更新日期:2004-06-01 00:00:00

  • Using bone marrow matrix to analyze meprobamate for forensic toxicological purposes.

    abstract::Bone marrow (BM) analysis is of forensic interest for postmortem toxicological investigations where blood samples are unavailable or unusable. Due to the lack of studies, it remains difficult to interpret concentrations of xenobiotics measured in this matrix. Based on a statistical approach published previously to int...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-013-0833-8

    authors: Bévalot F,Gustin MP,Cartiser N,Gaillard Y,Le Meur C,Fanton L,Guitton J,Malicier D

    更新日期:2013-09-01 00:00:00

  • Setting the boundaries of prior influence on kinship relation testing: the case of many hypotheses.

    abstract::Kinship relation and, in particular, paternity probability estimation using a Bayesian approach require the input of a priori probabilities of different hypotheses. In practical case work, a priori probabilities or priors, for short, must often be estimated using only common sense and symmetry arguments because in mos...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-013-0827-6

    authors: Hubig M,Sanft J,Muggenthaler H,Mall G

    更新日期:2013-11-01 00:00:00

  • Towards developing forensically relevant single-cell pipelines by incorporating direct-to-PCR extraction: compatibility, signal quality, and allele detection.

    abstract::Current analysis of forensic DNA stains relies on the probabilistic interpretation of bulk-processed samples that represent mixed profiles consisting of an unknown number of potentially partial representations of each contributor. Single-cell methods, in contrast, offer a solution to the forensic DNA mixture problem b...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-021-02503-4

    authors: Sheth N,Swaminathan H,Gonzalez AJ,Duffy KR,Grgicak CM

    更新日期:2021-01-23 00:00:00

  • Population genetic analysis of Chinese Zhuang and Mulao minorities using AGCU-X19 STR kit.

    abstract::To investigate the genetic variation and forensic efficiency of 19 X-STR loci in the Zhuang and Mulao minorities, we calculated allele frequencies, forensic parameters, and haplotype frequencies of 405 Zhuang and 234 Mulao unrelated healthy individuals from Guangxi Zhuang Autonomous Region of China. Furthermore, we an...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-019-02004-5

    authors: Xiao C,Li S,Zhang X,Yang X,Liu C,Chen L

    更新日期:2020-03-01 00:00:00

  • Forensic genetic analysis of population of Madhya Pradesh with PowerPlex Fusion 6C™ Multiplex System.

    abstract::Performance of PowerPlex Fusion 6C kit (PP F6C) was assessed in 374 unrelated individuals belonging to Madhya Pradesh, an Indian state. The study evaluated the forensic parameters for the loci included in PP F6C Multiplex System. The combined discrimination power (CPD) and combined exclusion power (CPE) were 1 and 0.9...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-019-02017-0

    authors: Dixit S,Shrivastava P,Kumawat RK,Kaitholia K,Dash HR,Sharma H,Choubey G

    更新日期:2019-05-01 00:00:00

  • Rare cause of natural death in forensic setting: hemophagocytic syndrome.

    abstract::We report about the case of a sudden unexpected death of a 25-year-old male suffering from infectious disease. An autopsy was ordered with no final premortem diagnosis. Microscopic and microbiological examination revealed a pneumococcal bronchopneumonia and hemophagocytic lesions in the bone marrow. After integrating ...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-015-1305-0

    authors: Ondruschka B,Habeck JO,Hädrich C,Dreßler J,Bayer R

    更新日期:2016-05-01 00:00:00

  • Slip and tilt: modeling falls over railings.

    abstract::Falls over railings are frequent case scenarios forensic experts are confronted with. An important issue is the differentiation of accidental and non-accidental falling scenarios. From a biomechanical point of view, this is a challenging task and should be addressed in a multifactorial approach. This work presents a s...

    journal_title:International journal of legal medicine

    pub_type: 杂志文章

    doi:10.1007/s00414-020-02432-8

    authors: Muggenthaler H,Hubig M,Meierhofer A,Mall G

    更新日期:2021-01-01 00:00:00