A novel plasmid pIJB1 possessing a putative 2,4-dichlorophenoxyacetate degradative transposon Tn5530 in Burkholderia cepacia strain 2a.

Abstract:

:A 102-kb plasmid, pIJB1, was isolated from Burkholderia cepacia strain 2a, which is able to use 2,4-dichlorophenoxyacetate (2,4-D) as a sole carbon source, and a physical map of the plasmid has been established. It was observed that spontaneous loss of a 37-kb fragment of the plasmid after growth in nonselective medium occurred, generating a plasmid of diminished size, pIJB2. The deletion event is concomitant with the loss of the 2,4-D dissimilatory phenotype, indicating that at least some of the 2,4-D degradative genes are on the missing fragment. The missing fragment is flanked by two identical 4.3-kb insertion sequences (IS) and shows a typical composite transposon structure of 41-kb in size, designated Tn5530. The mutant plasmid pIJB2 possesses a single copy of the IS element.

journal_name

Plasmid

journal_title

Plasmid

authors

Xia XS,Aathithan S,Oswiecimska K,Smith AR,Bruce IJ

doi

10.1006/plas.1997.1332

subject

Has Abstract

pub_date

1998-01-01 00:00:00

pages

154-9

issue

2

eissn

0147-619X

issn

1095-9890

pii

S0147-619X(97)91332-9

journal_volume

39

pub_type

杂志文章

相关文献

PLASMID文献大全
  • Characterization of class 1 integron resistance gene cassettes and the identification of a novel IS-like element in Acinetobacter baumannii.

    abstract::Based on hybridization studies, 21/32 multi-resistant clinical isolates of Acinetobacter baumannii contain class 1 integrons. Amplification products were obtained from 20 of the hybridization-positive strains. A single dfrA7 cassette was identified in 18 of the isolates and an integron with two cassettes (aadB-aadA4) ...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/s0147-619x(03)00011-8

    authors: Segal H,Thomas R,Gay Elisha B

    更新日期:2003-03-01 00:00:00

  • Isolation of DNA insertion elements from Rhizobium meliloti which are able to promote transcription of adjacent genes.

    abstract::In order to select insertion sequences able to promote transcription of flanking genes (ISp elements), three mobilizable RSF1010 derived vectors were constructed. Using promoterless antibiotic resistance genes, ISp elements ranging from 0.75 to 2.9 kb were isolated from Escherichia coli and Rhizobium meliloti. Restric...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(90)90007-y

    authors: Labes G,Simon R

    更新日期:1990-11-01 00:00:00

  • Construction of recombinant adenovirus vector containing a modified gene that codes for human hypoxia-inducible factor-1alpha without oxygen-dependent degradation domain.

    abstract::The expression of hypoxia-inducible factor-1alpha (HIF-1alpha) in heart allografts is an important mechanism in response to ischemia/reperfusion (I/R) injury which represents the single major non-immunologic factor implicated in pathogenesis of chronic graft dysfunction (CGD). Adenoviral mediated overexpression of HIF...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2009.09.002

    authors: Wei L,Lu J,Feng L,Li S,Shan J,Li Y

    更新日期:2010-01-01 00:00:00

  • Characterization of pPT23B, the plasmid involved in syringolide production by Pseudomonas syringae pv. tomato PT23.

    abstract::Avirulence gene D (avrD) in strain PT23 of Pseudomonas syringae pv. tomato (Pst) specifies the production of syringolides, which are elicitors of plant defense reactions. An 83-kb indigenous plasmid (pPT23B) that carries avrD has been mapped and characterized and a putative par region was identified. pPT23B contains a...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1994.1029

    authors: Murillo J,Shen H,Gerhold D,Sharma A,Cooksey DA,Keen NT

    更新日期:1994-05-01 00:00:00

  • An improved plasmid size standard, 39R861.

    abstract::The four plasmids in E. coli 39R861 have been used as size standards for closed-circular plasmid DNA since the 1980s. However, their sizes had only been estimated. Here, the complete sequence of the 61.3 kb cryptic FII plasmid p39R861-3 is reported, and the sizes of p39R861-4, pSa and NTP168 were determined to be 155....

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2019.01.002

    authors: Moran RA,Anantham S,Hall RM

    更新日期:2019-03-01 00:00:00

  • Construction and characterization of shuttle plasmids for lactic acid bacteria and Escherichia coli.

    abstract::The chimeric plasmid pBN183 was first constructed in Escherichia coli by ligating the BamHI-digested E. coli plasmid pBR322 and a Bg/II-linearized streptococcal plasmid, pNZ18. The pBN183 transformed E. coli to ApR at a frequency of (8.2 +/- 1.2) x 10(5) colony forming units (CFU)/microgram DNA. Electrotransformation ...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(92)90033-7

    authors: Solaiman DK,Somkuti GA,Steinberg DH

    更新日期:1992-07-01 00:00:00

  • A simple method to construct T-vectors using XcmI cassettes amplified by nonspecific PCR.

    abstract::Polymerase chain reaction (PCR) is one of the most powerful tools in cloning genes. For the direct cloning of PCR products, T-vectors, which contain complementary 3'-thymidine overhangs, are widely used. In the present study, we developed a plasmid, pNB-T, which was constructed by cloning an XcmI cassette with a suffi...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.2000.1500

    authors: Jo C,Jo SA

    更新日期:2001-01-01 00:00:00

  • A stable Escherichia coli-Mycobacterium smegmatis plasmid shuttle vector containing the mycobacteriophage D29 origin.

    abstract::A plasmid shuttle vector for Escherichia coli and mycobacteria was constructed from an E. coli plasmid containing the ColE1 origin, a 2.6-kb PstI fragment from bacteriophage D29 that grows in numerous mycobacterial species, and the kanamycin resistance gene either of Tn903 or of Tn5. The resultant plasmid is 7.63 kb a...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(92)90059-j

    authors: David M,Lubinsky-Mink S,Ben-Zvi A,Ulitzur S,Kuhn J,Suissa M

    更新日期:1992-11-01 00:00:00

  • Conjugative transfer of the Escherichia coli-Clostridium perfringens shuttle vector pJIR1457 to Clostridium botulinum type A strains.

    abstract::An RP4-oriT shuttle vector pJIR1457 originally developed for Clostridium perfringens was successfully transferred by conjugation from Escherichia coli to Clostridium botulinum type A strains and to a nontoxigenic C. botulinum type A-transposon Tn916 mutant strain lacking the entire toxin gene cluster. The light chain ...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1998.1366

    authors: Bradshaw M,Goodnough MC,Johnson EA

    更新日期:1998-11-01 00:00:00

  • Integration-proficient plasmids for Pseudomonas aeruginosa: site-specific integration and use for engineering of reporter and expression strains.

    abstract::An improved method for integration of exogenous DNA fragments at a defined site within the genome of Pseudomonas aeruginosa was developed. The method relies on two integration-proficient vectors, mini-CTX1 and mini-CTX2. These two vectors contain (1) a tetracycline (tet) selectable marker, (2) an oriT for conjugation-...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1999.1441

    authors: Hoang TT,Kutchma AJ,Becher A,Schweizer HP

    更新日期:2000-01-01 00:00:00

  • Impact of plasmid interactions with the chromosome and other plasmids on the spread of antibiotic resistance.

    abstract::Naturally occurring plasmids have medical importance given that they frequently code for virulence or antibiotic resistance. In many cases, plasmids impose a fitness cost to their hosts, meaning that the growth rate of plasmid-bearing cells is lower than that of plasmid-free cells. However, this does not fit with the ...

    journal_title:Plasmid

    pub_type: 杂志文章,评审

    doi:10.1016/j.plasmid.2018.09.009

    authors: Gama JA,Zilhão R,Dionisio F

    更新日期:2018-09-01 00:00:00

  • Isolation of thermosensitive mutants of Yersinia enterocolitica by transposon insertion.

    abstract::During bacterial infection, pathogens are exposed to a variety of stimuli, e.g., sudden temperature increase on entering mammalian host or oxidative stress associated with exposure to phagocytes. Yersinia enterocolitica, which is a facultative intracellular bacteria, responds to macrophage phagocytosis by the producti...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1994.1062

    authors: Yamamoto T,Hanawa T,Murayama SY,Ogata S

    更新日期:1994-09-01 00:00:00

  • Suggestions as to quantitative measurements of plasmid loss.

    abstract::Suggestions are made for the estimation of plasmid loss rates in bacterial populations that multiply by binary fission. The plasmid loss rate is defined as the probability of a division of a plasmid-carrying individual giving birth to one plasmid-free and one plasmid-carrying daughter cell. The unit of time is consequ...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1996.0042

    authors: Boe L,Rasmussen KV

    更新日期:1996-11-01 00:00:00

  • A 50-kb plasmid rich in mobile gene sequences isolated from a marine micrococcus.

    abstract::A 50,709-bp cryptic plasmid isolated from a marine Micrococcus has been sequenced and found to contain a number of putative mobile genetic elements. The coding regions for 11 putative transposases comprise approximately 17% of the total plasmid sequence. The majority of these transposases are located within a 13-kb cl...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.2001.1550

    authors: Zhong Z,Caspi R,Mincer T,Helinski D,Knauf V,Boardman K,Wilkinson JE,Shea T,DeLoughery C,Toukdarian A

    更新日期:2002-01-01 00:00:00

  • A new vector for heterologous gene expression in Escherichia coli with increased stability in the absence of antibiotic.

    abstract::Expression vectors for industrial production should be stable and allow tight control of protein synthesis. This is necessary to ensure plasmid transmission to daughter cells in order to achieve a stable population capable of synthesizing high amounts of the target protein. A high-copy-number plasmid, pAE, was previou...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2018.08.004

    authors: Eguia FAP,Ramos HR,Kraschowetz S,Omote D,Ramos CRR,Ho PL,Carvalho E,Gonçalves VM

    更新日期:2018-06-01 00:00:00

  • Resistance to imidazoles and triazoles in Saccharomyces cerevisiae as a new dominant marker.

    abstract::The imidazole and triazole fungicides inhibit cytochrome P450 14 alpha-lanosterol demethylase (P45014DM) implicated in the ergosterol biosynthesis pathway, which is specific to fungi and yeasts. Two plasmids were obtained which allow triazole and imidazole resistance in Saccharomyces cerevisiae. The low copy number pl...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1993.1054

    authors: Doignon F,Aigle M,Ribereau-Gayon P

    更新日期:1993-11-01 00:00:00

  • Improving biosynthetic production of pinene through plasmid recombination elimination and pathway optimization.

    abstract::Pinene is a monoterpene with wide industrial applications, especially as a promising high energy-density jet fuel. Traditional production of pinene on an industrial scale is material consumptive and has a low yield. As an alternative, microbial organisms have been engineered though advanced synthetic biological techni...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2019.102431

    authors: Bao SH,Zhang DY,Meng E

    更新日期:2019-09-01 00:00:00

  • Morphological and serological relationships of conjugative pili.

    abstract::It is now known that conjugative pili are determined by representative plasmids for all incompatibility groups in Escherichia coli K-12. They fall into three basic morphological groups, which are described: thin flexible, thick flexible, and rigid filaments or rods. The main thrust of this study, however, has been the...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(80)90005-0

    authors: Bradley DE

    更新日期:1980-09-01 00:00:00

  • New shuttle vectors for ectopic insertion of genes into Bacillus subtilis.

    abstract::We have constructed shuttle vectors for integration of genes via double homologous recombination into three ectopic sites on the chromosome of Bacillus subtilis. The sites of integration are the pyrD, gltA, and sacA genes located at 139 degrees, 172 degrees, and 333 degrees, respectively, on the chromosome. Integratio...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2004.01.006

    authors: Middleton R,Hofmeister A

    更新日期:2004-05-01 00:00:00

  • Organization of the horizontally transferred pheBA operon and its adjacent genes in the genomes of eight indigenous Pseudomonas strains.

    abstract::Horizontal transfer of genes encoding phenol degradation (pheBA) in the environment has been previously described. Complete or partial phe-operon was redetected in plasmids of several indigenous Pseudomonas strains isolated from the river water. The sequences of up- and downstream regions of the acquired phe-DNA in ei...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2004.07.003

    authors: Peters M,Tomikas A,Nurk A

    更新日期:2004-11-01 00:00:00

  • Sequences of versatile broad-host-range vectors of the RK2 family.

    abstract::Plasmid pRK404-a smaller derivative of RK2-is a tetracycline-resistant broad-host-range vector that carries a multiple cloning site and the lacZ(alpha) peptide that enables blue/white selection for cloned inserts in Escherichia coli. We present herein the complete and annotated sequence of pRK404 and three related vec...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/s0147-619x(03)00030-1

    authors: Scott HN,Laible PD,Hanson DK

    更新日期:2003-07-01 00:00:00

  • Plasmid-mediated resistance to tellurite: expressed and cryptic.

    abstract::The ability of some bacteria to grow in the presence of high concentrations of tellurium compounds has been recognized for almost 100 years. Since then, interest in this phenomenon has generated a slow but steady trickle of literature. In the past few years, the use of modern techniques in molecular biology has led to...

    journal_title:Plasmid

    pub_type: 杂志文章,评审

    doi:10.1016/0147-619x(92)90006-v

    authors: Walter EG,Taylor DE

    更新日期:1992-01-01 00:00:00

  • Cloning and sequence analysis of a novel insertion element from plasmids harbored by the carbofuran-degrading bacterium, Sphingomonas sp. CFO6.

    abstract::Sphingomonas sp. CFO6 (a member of the alpha group of Proteobacteria) was isolated from a Washington soil by enrichment on the insecticide carbofuran as a sole source of carbon and energy. This strain has been shown to harbor five plasmids, at least some of which are required for catabolism of carbofuran. Rearrangemen...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1997.1289

    authors: Feng X,Ou LT,Ogram A

    更新日期:1997-01-01 00:00:00

  • A phagemid vector library for cloning DNA with four-nucleotide 5' or 3' overhangs.

    abstract::A phagemid vector library for cloning DNA with four nucleotide 5' or 3' overhangs has been constructed. This library is based on the pT7T3 vector (Pharmacia) which is a modification of the phagemid pTZ18U vector. We have chosen pT7T3 as the parent vector because it can be used for Sanger's dideoxy sequencing and for t...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(91)90038-x

    authors: Waye MM,Mui F,Hodge K,Li VK

    更新日期:1991-07-01 00:00:00

  • Restriction map of virulence plasmid in Yersinia enterocolitica O:3.

    abstract::Restriction map of the 72-kb virulence plasmid isolated from Yersinia enterocolitica O:3 was generated using EcoRI, BamHI, HindIII, and XbaI restriction enzymes. The mapping was done after cloning all of the 13 BamHI fragments of the plasmid in Escherichia coli. In addition, the restriction enzyme analysis revealed tw...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(86)90062-4

    authors: Pulkkinen L,Granberg I,Granfors K,Toivanen A

    更新日期:1986-11-01 00:00:00

  • Bacteriophages for incompatibility group H plasmids: morphological and growth characteristics.

    abstract::Two independently isolated temperature-sensitive bacteriophage that are specific for enterobacterial hosts harboring HI and HII plasmids were characterized to determine if any identifiable differences existed between them. The traits examined included adsorption pattern of phage to H pili, bacteriophage size, sensitiv...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/0147-619x(91)90055-2

    authors: Maher D,Sherburne R,Taylor DE

    更新日期:1991-09-01 00:00:00

  • Two replication initiators - one mechanism for replication origin opening?

    abstract::DNA replication initiation has been well-characterized; however, studies in the past few years have shown that there are still important discoveries to be made. Recent publications concerning the bacterial DnaA protein have revealed how this replication initiator, via interaction with specific sequences within the ori...

    journal_title:Plasmid

    pub_type: 杂志文章,评审

    doi:10.1016/j.plasmid.2014.10.003

    authors: Zabrocka E,Wegrzyn K,Konieczny I

    更新日期:2014-11-01 00:00:00

  • Sequence and analysis of the 46.6-kb plasmid pA1 from Sphingomonas sp. A1 that corresponds to the typical IncP-1beta plasmid backbone without any accessory gene.

    abstract::Sphingomonas sp. A1 (strain A1) is capable of directly incorporating macromolecules (e.g., alginate) through the specialized import system--"super-channel." Here, we report the complete DNA sequence and genetic organization of plasmid pA1 from strain A1. Nucleotide sequence analysis revealed that pA1 comprises 46,557 ...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1016/j.plasmid.2005.12.002

    authors: Harada KM,Aso Y,Hashimoto W,Mikami B,Murata K

    更新日期:2006-07-01 00:00:00

  • Cloning and characterization of a high-copy-number novel insertion sequence from chemolithotrophic Thiobacillus ferrooxidans.

    abstract::Two distinct families of repetitive DNA elements (1.4 and 1.2 kb) were identified from S1 nuclease-treated genomic DNA of four strains of Thiobacillus ferrooxidans. The 1.4-kb fragment hybridized with IST2, an insertion sequence of T. ferrooxidans. The 1.2-kb fragment was cloned and sequenced. The sequence (IST445), 1...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.1997.1306

    authors: Chakraborty R,Deb C,Lohia A,Roy P

    更新日期:1997-01-01 00:00:00

  • pMH11, A tool for gene disruption and expression analysis in Azorhizobium caulinodans.

    abstract::Tools for mutagenesis and expression analyses are needed to study the role of bacterial genes. Here, we report the construction of pMH11, a small, mobilizable plasmid that replicates in Escherichia coli, but not in Azorhizobium caulinodans, a nodulating microsymbiont of Sesbania rostrata, and that contains a unique Ba...

    journal_title:Plasmid

    pub_type: 杂志文章

    doi:10.1006/plas.2002.1565

    authors: D'Haeze W,Verplancke C,Mironov V,Holsters M

    更新日期:2002-03-01 00:00:00