Complete genome sequence of an isolate of duck enteritis virus from China.

Abstract:

:Here, we present the complete genomic sequence of duck enteritis virus (DEV) strain SD, isolated in China in 2012. The virus was virulent in experimentally infected 2-month-old ducks. The DEV SD genome is 160,945 base pairs (bp) in length. The viral genome sequence, when compared to that of strain DEV CSC, which was isolated in 1962, showed three discontinuous deletions of 101 bp, 48 bp and 417 bp within the inverted repeats. A comparison of the amino acid (aa) sequences of all ORFs of the CSC and SD isolates demonstrated an11-aa deletion, two single-aa deletions, and one single-aa deletion in LORF3, UL47, UL4, respectively. Moreover, 38 single aa variations were also detected in 24 different ORFs. These results will further advance our understanding of the genetic variations involved in evolution.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Zhang B,Huang X,Yang Y,Zhang M,Song Y,Yang C

doi

10.1007/s00705-020-04594-7

subject

Has Abstract

pub_date

2020-07-01 00:00:00

pages

1687-1689

issue

7

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-020-04594-7

journal_volume

165

pub_type

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