Specificity and selectivity in post-translational biotin addition.

Abstract:

:Biotin, which serves as a carboxyl group carrier in reactions catalyzed by biotin-dependent carboxylases, is essential for life in most organisms. To function in carboxylate transfer, the vitamin must be post-translationally linked to a specific lysine residue on the biotin carboxyl carrier (BCC) of a carboxylase in a reaction catalyzed by biotin protein ligases. Although biotin addition is highly selective for any single carboxylase substrate, observations of interspecies biotinylation suggested little discrimination among the BCCs derived from the carboxylases of a broad range of organisms. Application of single turnover kinetic techniques to measurements of post-translational biotin addition reveals previously unappreciated selectivity that may be of physiological significance.

journal_name

Biochem Soc Trans

authors

Beckett D

doi

10.1042/BST20180425

subject

Has Abstract

pub_date

2018-12-17 00:00:00

pages

1577-1591

issue

6

eissn

0300-5127

issn

1470-8752

pii

BST20180425

journal_volume

46

pub_type

杂志文章,评审
  • Molecular mechanisms for regulation of AMPAR trafficking by PICK1.

    abstract::AMPA (alpha-amino-3-hydroxy-5-methylisoxazole-4-propionic acid) receptor trafficking is a fundamental mechanism for regulating synaptic strength, and hence may underlie cellular processes involved in learning and memory. PICK1 (protein that interacts with protein C-kinase) has recently emerged as a key regulator of AM...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0340931

    authors: Hanley JG

    更新日期:2006-11-01 00:00:00

  • Role of hormone-controlled T-cell cytokines in the maintenance of pregnancy.

    abstract::Human CD4 T helper lymphocytes can be subdivided into at least three distinct functional subsets on the basis of their cytokine secretion profiles. One type of CD4+ lymphocyte, T helper 1 (Th1), produces interferon (IFN)-gamma and tumour necrosis factor beta, a second type (Th2) produces interleukin (IL)-4 and IL-5 an...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/bst0280212

    authors: Piccinni MP,Maggi E,Romagnani S

    更新日期:2000-02-01 00:00:00

  • The ultrastructure of the compartmentalized anaerobic ammonium-oxidizing bacteria is linked to their energy metabolism.

    abstract::The most striking example of a complex prokaryotic intracytoplasmic organization can be found in the members of the phylum Planctomycetes. Among them are the anammox (anaerobic ammonium-oxidizing) bacteria, which possess a unique cell compartment with an unprecedented function in bacteria: the anammoxosome is a prokar...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20110728

    authors: Neumann S,Jetten MS,van Niftrik L

    更新日期:2011-12-01 00:00:00

  • Role of the phosphoinositide 3-kinase pathway in mouse embryonic stem (ES) cells.

    abstract::Mouse ES (embryonic stem) cells maintain pluripotency with robust proliferation in vitro. ES cells share some similarities with cancer cells, such as anchorage-independent growth, loss of contact inhibition and tumour formation. After differentiation, ES cells lose pluripotency and tumorigenicity. Recent studies showe...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20051522

    authors: Takahashi K,Murakami M,Yamanaka S

    更新日期:2005-12-01 00:00:00

  • The zDHHC family of S-acyltransferases.

    abstract::The discovery of the zDHHC family of S-acyltransferase enzymes has been one of the major breakthroughs in the S-acylation field. Now, more than a decade since their discovery, major questions centre on profiling the substrates of individual zDHHC enzymes (there are 24 ZDHHC genes and several hundred S-acylated protein...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20140270

    authors: Lemonidis K,Werno MW,Greaves J,Diez-Ardanuy C,Sanchez-Perez MC,Salaun C,Thomson DM,Chamberlain LH

    更新日期:2015-04-01 00:00:00

  • Computational discovery and modeling of novel gene expression rules encoded in the mRNA.

    abstract::The transcript is populated with numerous overlapping codes that regulate all steps of gene expression. Deciphering these codes is very challenging due to the large number of variables involved, the non-modular nature of the codes, biases and limitations in current experimental approaches, our limited knowledge in gen...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST20191048

    authors: Bahiri-Elitzur S,Tuller T

    更新日期:2020-08-28 00:00:00

  • Specificity in ligand binding and intracellular signalling by insulin and insulin-like growth factor receptors.

    abstract::The physiological roles of insulin and insulin-like growth factors (IGFs) are distinct, with insulin acting to regulate cellular uptake and metabolism of fuels, whereas IGFs promote cell growth, survival and differentiation. The only components of signalling pathways known to be unique to insulin and IGFs are their re...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/bst0290513

    authors: Siddle K,Ursø B,Niesler CA,Cope DL,Molina L,Surinya KH,Soos MA

    更新日期:2001-08-01 00:00:00

  • Tetraspanin CD9 in cell migration.

    abstract::Tetraspanin CD9 is associated with integrin adhesion receptors and it was reported that CD9 regulates integrin-dependent cell migration and invasion. Pro- and anti-migratory effects of CD9 have been linked to adhesion-dependent signalling pathways, including phosphorylation of FAK (focal adhesion kinase) and activatio...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0390563

    authors: Powner D,Kopp PM,Monkley SJ,Critchley DR,Berditchevski F

    更新日期:2011-04-01 00:00:00

  • Twins studies as a model for studies on the interaction between smoking and genetic factors in the development of chronic bronchitis.

    abstract::Smoking is the main risk factor for COPD (chronic obstructive pulmonary disease) but genetic factors are of importance, since only a subset of smokers develops the disease. Sex differences have been suggested both in disease prevalence and response to environmental exposures. Furthermore, it has been shown that acquis...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0370814

    authors: Svartengren M,Engström G,Anderson M,Hallberg J,Edula G,de Verdier MG,Dahlbäck M,Lindberg CM,Forsman-Semb K,Nihlén U,Fehniger TE

    更新日期:2009-08-01 00:00:00

  • AMP-activated protein kinase regulates gene expression by direct phosphorylation of nuclear proteins.

    abstract::One of the primary functions of AMP-activated protein kinase (AMPK) is to regulate the metabolic pathways in response to reduced cellular energy charge. Most of the known targets of the kinase are cytoplasmic enzymes involved in both catabolic and anabolic metabolism. In addition, activation of AMPK in many cells resu...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/bst0310224

    authors: Leff T

    更新日期:2003-02-01 00:00:00

  • Molecular and atomic analysis of uranium complexes formed by three eco-types of Acidithiobacillus ferrooxidans.

    abstract::A combination of EXAFS, transmission electron microscopy and energy-dispersive X-ray was used to conduct a molecular and atomic analysis of the uranium complexes formed by Acidithiobacillus ferrooxidans. The results demonstrate that this bacterium accumulates uranium as phosphate compounds. We suggest that at toxic le...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/bst0300669

    authors: Merroun M,Hennig C,Rossberg A,Geipel G,Reich T,Selenska-Pobell S

    更新日期:2002-08-01 00:00:00

  • Takeover of host ribosomes by divergent IRES elements.

    abstract::The ribosome is the macromolecular machinery in the host cell for which all viruses have to compete. Early in infection, the viral mRNAs have to compete with the host for both the ribosomes and for the limited pool of eukaryotic initiation factors that are needed to facilitate the recruitment of ribosomes to both vira...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20051479

    authors: Sarnow P,Cevallos RC,Jan E

    更新日期:2005-12-01 00:00:00

  • Biomolecular complex viewed by dynamic nuclear polarization solid-state NMR spectroscopy.

    abstract::Solid-state nuclear magnetic resonance (ssNMR) is an indispensable tool for elucidating the structure and dynamics of insoluble and non-crystalline biomolecules. The recent advances in the sensitivity-enhancing technique magic-angle spinning dynamic nuclear polarization (MAS-DNP) have substantially expanded the territ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST20191084

    authors: Chakraborty A,Deligey F,Quach J,Mentink-Vigier F,Wang P,Wang T

    更新日期:2020-06-30 00:00:00

  • Frequency modulated translocational oscillations of Nrf2, a transcription factor functioning like a wireless sensor.

    abstract::The discovery that nuclear factor erythroid 2-related factor 2 (Nrf2) undergoes translocational oscillations from cytoplasm to nucleus in human cells with frequency modulation linked to activation of a stress-stimulated cytoprotective response raises the prospect that the Nrf2 works mechanistically analogous to a wire...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST20150060

    authors: Xue M,Momiji H,Rabbani N,Bretschneider T,Rand DA,Thornalley PJ

    更新日期:2015-08-01 00:00:00

  • The role of TDP-43 in the pathogenesis of ALS and FTLD.

    abstract::TDP-43 (TAR DNA-binding protein 43) is an hnRNP (heterogeneous nuclear ribonucleoprotein) protein whose role in cellular processes has come to the forefront of neurodegeneration research after the observation that it is the main component of brain inclusions in ALS (amyotrophic lateral sclerosis) and FTLD (frontotempo...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20130186

    authors: Baralle M,Buratti E,Baralle FE

    更新日期:2013-12-01 00:00:00

  • Impact of dietary amino acids and polyamines on intestinal carcinogenesis and chemoprevention in mouse models.

    abstract::Colon cancer in humans is influenced by both genetic and dietary risk factors. The majority of colon cancers have somatic mutations in the APC (adenomatous polyposis coli) tumour-suppressor gene. Dietary arginine enhances the risk of APC-dependent colon carcinogenesis in mouse models by a mechanism involving NOS2 (nit...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0350322

    authors: Gerner EW

    更新日期:2007-04-01 00:00:00

  • The role of IRES trans-acting factors in regulating translation initiation.

    abstract::The majority of mRNAs in eukaryotic cells are translated via a method that is dependent upon the recognition of, and binding to, the methylguanosine cap at the 5' end of the mRNA, by a set of protein factors termed eIFs (eukaryotic initiation factors). However, many of the eIFs involved in this process are modified an...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0381581

    authors: King HA,Cobbold LC,Willis AE

    更新日期:2010-12-01 00:00:00

  • Mitotic motors and chromosome segregation: the mechanism of anaphase B.

    abstract::Anaphase B spindle elongation plays an important role in chromosome segregation. In the present paper, we discuss our model for anaphase B in Drosophila syncytial embryos, in which spindle elongation depends on an ip (interpolar) MT (microtubule) sliding filament mechanism generated by homotetrameric kinesin-5 motors ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0391149

    authors: Brust-Mascher I,Scholey JM

    更新日期:2011-10-01 00:00:00

  • Structural and functional comparison of 2-His-1-carboxylate and 3-His metallocentres in non-haem iron(II)-dependent enzymes.

    abstract::The canonical structural motif for co-ordination of non-haem ferrous iron in metal-dependent oxygenases is a facial triad of two histidine residues and one aspartate or glutamate residue. This so-called 2-His-1-carboxylate metallocentre is often accommodated in a double-stranded beta-helix fold with the iron-co-ordina...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0361180

    authors: Leitgeb S,Nidetzky B

    更新日期:2008-12-01 00:00:00

  • Compartmentalization of GPCR signalling controls unique cellular responses.

    abstract::With >800 members, G protein-coupled receptors (GPCRs) are the largest class of cell-surface signalling proteins, and their activation mediates diverse physiological processes. GPCRs are ubiquitously distributed across all cell types, involved in many diseases and are major drug targets. However, GPCR drug discovery i...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20150236

    authors: Ellisdon AM,Halls ML

    更新日期:2016-04-15 00:00:00

  • Roles for the AAA+ motifs of DnaA in the initiation of DNA replication.

    abstract::The cell-cycle-co-ordinated initiation of chromosomal replication is highly regulated. The ordered assembly and conformational change of specific proteins at the replication origin are crucial to the process of replication initiation. In Escherichia coli, ATP-DnaA molecules form multimeric complexes with the chromosom...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0360078

    authors: Katayama T

    更新日期:2008-02-01 00:00:00

  • Molecular characterization of fatty acid alpha-hydroperoxide-forming enzyme (alpha-oxygenase) in rice plants.

    abstract::Genes encoding an alpha-oxygenase, in Nicotiana tabacum and Arabidopsis thaliana, have been recently isolated. However, the reaction mechanism of the enzyme has not so far been elucidated. In this study, a cDNA encoding the fatty acid alpha-oxygenase gene in rice plants was isolated. The deduced amino acid sequence sh...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:

    authors: Koeduka T,Matsui K,Akakabe Y,Kajiwara T

    更新日期:2000-12-01 00:00:00

  • Networking in the endoplasmic reticulum.

    abstract::The network of the ER (endoplasmic reticulum) is set up by cytoskeletal control of the movement and remodelling of polygonal rings of tubules, bundles of tubules and cisternal regions. We have developed a new image analysis tool, persistency mapping, to understand the framework upon which the plant ER remodels. With t...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0380747

    authors: Griffing LR

    更新日期:2010-06-01 00:00:00

  • LRRK2 and autophagy: a common pathway for disease.

    abstract::LRRK2 (leucine-rich repeat kinase 2) is an enzyme implicated in human disease, containing kinase and GTPase functions within the same multidomain open reading frame. Dominant mutations in the LRRK2 gene are the most common cause of familial PD (Parkinson's disease). Additionally, in genome-wide association studies, th...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20120126

    authors: Manzoni C

    更新日期:2012-10-01 00:00:00

  • Mitochondrial respiration at low levels of oxygen and cytochrome c.

    abstract::In the intracellular microenvironment of active muscle tissue, high rates of respiration are maintained at near-limiting oxygen concentrations. The respiration of isolated heart mitochondria is a hyperbolic function of oxygen concentration and half-maximal rates were obtained at 0.4 and 0.7 microM O(2) with substrates...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/

    authors: Gnaiger E,Kuznetsov AV

    更新日期:2002-04-01 00:00:00

  • Model-based evolutionary analysis: the natural history of phage-shock stress response.

    abstract::The evolution of proteins is inseparably linked to their function. Because most biological processes involve a number of different proteins, it may become impossible to study the evolutionary properties of proteins in isolation. In the present article, we show how simple mechanistic models of biological processes can ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章

    doi:10.1042/BST0370762

    authors: Huvet M,Toni T,Tan H,Jovanovic G,Engl C,Buck M,Stumpf MP

    更新日期:2009-08-01 00:00:00

  • Post-translational modification of nucleoid-associated proteins: an extra layer of functional modulation in bacteria?

    abstract::Post-translational modification (PTM) of histones has been investigated in eukaryotes for years, revealing its widespread occurrence and functional importance. Many PTMs affect chromatin folding and gene activity. Only recently the occurrence of such modifications has been recognized in bacteria. However, it is unclea...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST20180488

    authors: Dilweg IW,Dame RT

    更新日期:2018-10-19 00:00:00

  • Islet amyloid polypeptide: actions and role in the pathogenesis of diabetes.

    abstract::IAPP has been postulated to have a role as a modulating factor in glucose homoeostasis and to be involved in the pathophysiology of diabetes. However, the normal physiological functions of the peptide remain obscure: exogenous IAPP acts on many experimental systems to modulate nutrient supply and metabolism but there ...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/bst0240594

    authors: Clark A,Charge SB,Badman MK,MacArthur DA,de Koning EJ

    更新日期:1996-05-01 00:00:00

  • Memapsin 2 (beta-secretase) as a therapeutic target.

    abstract::As beta-secretase, memapsin 2 cleaves amyloid-beta precursor protein, which leads ultimately to the onset of Alzheimer's disease. As such, memapsin 2 is an excellent target of inhibitor drugs for the treatment of this disease. Here we describe the tools for memapsin 2 inhibitor design that have been developed and resu...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/bst0300530

    authors: Hong L,Turner RT 3rd,Koelsch G,Ghosh AK,Tang J

    更新日期:2002-08-01 00:00:00

  • Structural elements involved in activation of the gamma-aminobutyric acid type A (GABAA) receptor.

    abstract::Ligand-gated ion channels function as rapid signal transducers, converting chemical signals (in the form of neurotransmitters) into electrical signals in the postsynaptic neuron. This is achieved by the recognition of neurotransmitter at its specific-binding sites, which then triggers the opening of an ion channel ('g...

    journal_title:Biochemical Society transactions

    pub_type: 杂志文章,评审

    doi:10.1042/BST0320540

    authors: Kash TL,Trudell JR,Harrison NL

    更新日期:2004-06-01 00:00:00