Computational discovery and modeling of novel gene expression rules encoded in the mRNA.

abstract：:Large dense-core vesicles (LDCVs) were labelled in cultured bovine adrenal chromaffin cells expressing fluorescent chimaeric 'cargo' proteins that were targeted to these secretory vesicles. When the cells were stimulated with nicotine 48 h after transduction, the fractional loss of fluorescent LDCVs was much greater t...

journal_title：Biochemical Society transactions

authors： Wiegand UK,Duncan RR,Greaves J,Chow RH,Shipston MJ,Apps DK

更新日期：2003-08-01 00:00:00

abstract：:A limited number of bacteria, yeast and fungi can convert hemicellulose or its monomers (xylose, arabinose, mannose and galactose) into ethanol with a satisfactory yield and productivity. In the present study we tested a number of thermophilic enrichment cultures, and new isolates of thermophilic anaerobic bacterial s...

journal_title：Biochemical Society transactions

authors： Sommer P,Georgieva T,Ahring BK

更新日期：2004-04-01 00:00:00

abstract：:It is generally taken as an established fact that mitochondrial respiration is associated with the generation of small amounts of ROS (reactive oxygen species). There are many arguments supporting this side activity. A major argument is the particular physico-chemical configuration of dioxygen, which prevents the tran...

journal_title：Biochemical Society transactions

authors： Nohl H,Kozlov AV,Gille L,Staniek K

更新日期：2003-12-01 00:00:00

abstract：:Sugars that are readily respired by plant cells inhibit greening when dO2 and mu are relatively high. As sugar concentration in the batch culture medium is depleted and mu declines, greening is permitted. The mechanism of this effect has not been satisfactorily explained. ...

journal_title：Biochemical Society transactions

authors： Dalton C

更新日期：1980-08-01 00:00:00

abstract：:Among the several signalling pathways regulated by ubiquitin and ubiquitin-like proteins, the one activating NF-kappaB (nuclear factor kappaB) is certainly one of the best characterized. The regulation of the activity of this transcription factor by members of the ubiquitin family occurs at various levels, imposing ov...

journal_title：Biochemical Society transactions

authors： Lang V,Rodríguez MS

更新日期：2008-10-01 00:00:00

abstract：:CoA (coenzyme A) is a ubiquitous and essential cofactor that acts as an acyl group carrier in biochemical reactions. Apart from participating in numerous metabolic pathways as substrates and intermediates, CoA and a number of its thioester derivatives, such as acetyl-CoA, can also directly regulate the activity of pro...

journal_title：Biochemical Society transactions

authors： Tsuchiya Y,Pham U,Gout I

更新日期：2014-08-01 00:00:00

abstract：:Numerous RNA molecules with new catalytic properties have been isolated from synthetic combinatorial libraries. A broad range of chemical reactions is catalysed, and nucleic acids can accelerate bond formation between small organic substrates. This review focuses on carbon-carbon bond formation accelerated by in vitro...

journal_title：Biochemical Society transactions

authors： Jäschke A,Stuhlmann F,Bebenroth D,Keiper S,Wombacher R

更新日期：2002-11-01 00:00:00

abstract：:Colicins are protein antibiotics produced by Escherichia coli to kill closely related non-identical competing species. They have taken advantage of the promiscuity of several proteins in the cell envelope for entry into the bacterial cell. The Tol-Pal system comprises one such ensemble of periplasmic and membrane-asso...

journal_title：Biochemical Society transactions

authors： Penfold CN,Li C,Zhang Y,Vankemmelbeke M,James R

更新日期：2012-12-01 00:00:00

abstract：:The development of natural tissues, organs and bodies depends on mechanisms of patterning and of morphogenesis, typically (but not invariably) in that order, and often several times at different final scales. Using synthetic biology to engineer patterning and morphogenesis will both enhance our basic understanding of ...

journal_title：Biochemical Society transactions

authors： Davies JA,Glykofrydis F

更新日期：2020-06-30 00:00:00

abstract：:Haem (Fe-protoporphyrin IX) is a cofactor found in a wide variety of proteins. It confers diverse functions, including electron transfer, the binding and sensing of gases, and many types of catalysis. The majority of cofactors are non-covalently attached to proteins. There are, however, some proteins in which the cofa...

journal_title：Biochemical Society transactions

authors： Stevens JM,Uchida T,Daltrop O,Ferguson SJ

更新日期：2005-08-01 00:00:00

abstract：:LRRK2 (leucine-rich repeat kinase 2) is an enzyme implicated in human disease, containing kinase and GTPase functions within the same multidomain open reading frame. Dominant mutations in the LRRK2 gene are the most common cause of familial PD (Parkinson's disease). Additionally, in genome-wide association studies, th...

journal_title：Biochemical Society transactions

authors： Manzoni C

更新日期：2012-10-01 00:00:00

abstract：:A survey of archaeal genomes for the presence of homologues of bacterial and eukaryotic chaperones reveals several interesting features. All archaea contain chaperonins, also known as Hsp60s (where Hsp is heat-shock protein). These are more similar to the type II chaperonins found in the eukaryotic cytosol than to the...

journal_title：Biochemical Society transactions

authors： Large AT,Goldberg MD,Lund PA

更新日期：2009-02-01 00:00:00

abstract：:Nucleosomes are actively positioned along DNA by ATP-dependent, chromatin remodelling factors. A structural model for the ISW1a chromatin remodelling factor from Saccharomyces cerevisiae in complex with a dinucleosome substrate was constructed from the X-ray structures of ISW1a (ΔATPase) with and without DNA bound, tw...

journal_title：Biochemical Society transactions

authors： Richmond TJ

更新日期：2012-04-01 00:00:00

abstract：:UBDs [Ub (ubiquitin)-binding domains], which are typically small protein motifs of <50 residues, are used by receptor proteins to transduce post-translational Ub modifications in a wide range of biological processes, including NF-κB (nuclear factor κB) signalling and proteasomal degradation pathways. More than 20 fami...

journal_title：Biochemical Society transactions

authors： Searle MS,Garner TP,Strachan J,Long J,Adlington J,Cavey JR,Shaw B,Layfield R

更新日期：2012-04-01 00:00:00

abstract：:Stimulus-response coupling in animal cells frequently involves the hydrolysis of PtdIns(4,5)P(2) which is catalysed by phosphoinositide-specific phospholipase C (PI-PLC). There is an increasing body of evidence for PI-PLC-based signalling in plant cells; however, the physiological role of this system remains poorly do...

journal_title：Biochemical Society transactions

authors： Coursol S,Pierre JN,Vidal J

更新日期：2000-12-01 00:00:00

abstract：:Assembly of ribonucleoprotein complexes is a facilitated quality-controlled process that typically includes modification to the RNA component from precursor to mature form. The SRP (signal recognition particle) is a cytosolic ribonucleoprotein that catalyses protein targeting to the endoplasmic reticulum. Assembly of ...

journal_title：Biochemical Society transactions

authors： Leung E,Brown JD

更新日期：2010-08-01 00:00:00

abstract：:Studies of the DNA-replication machinery of Archaea have revealed striking similarities to that of eukaryotes. Indeed, it appears that in most cases Archaea possess a simplified version of the eukaryotic replication apparatus. Studies of Archaea are therefore shedding light on the fundamental processes of DNA replicat...

journal_title：Biochemical Society transactions

authors： Dionne I,Robinson NP,McGeoch AT,Marsh VL,Reddish A,Bell SD

更新日期：2003-06-01 00:00:00

abstract：:The cell-cycle-co-ordinated initiation of chromosomal replication is highly regulated. The ordered assembly and conformational change of specific proteins at the replication origin are crucial to the process of replication initiation. In Escherichia coli, ATP-DnaA molecules form multimeric complexes with the chromosom...

journal_title：Biochemical Society transactions

authors： Katayama T

更新日期：2008-02-01 00:00:00

abstract：:cAMP is an essential signalling molecule whose concentration in cells is regulated by a wide range of hormones. A large number of diseases, including cancer and asthma, are linked to improper regulation of the cAMP signalling system, and manipulation of cAMP levels by pharmaceutical agents has proven therapeutic benef...

journal_title：Biochemical Society transactions

authors： Yarwood SJ

更新日期：2005-12-01 00:00:00

abstract：:A range of mitochondria-targeted probe molecules that comprise a lipophilic cation covalently attached to an active moiety have been developed. The lipophilic cation causes the accumulation of these molecules into mitochondria, driven by the mitochondrial membrane potential. To date, we have targeted antioxidants, spi...

journal_title：Biochemical Society transactions

authors： Murphy MP

更新日期：2004-12-01 00:00:00

abstract：:NMDARs (N-methyl-D-aspartate receptors) are considered to be a target for the inhibitory actions of ethanol. While profound inhibition of both native and recombinant NMDARs can be observed following the application of high concentrations of ethanol the levels of inhibition seen with lower concentrations of ethanol are...

journal_title：Biochemical Society transactions

authors： Otton HJ,Janssen A,Wyllie DJ

更新日期：2009-12-01 00:00:00

abstract：:We have described a large number of different mutations in the LPL gene that result in completely catalytically defective LPL protein. More recently exonic polymorphisms in the LPL gene have been described that do not result in the catalytic activity of LPL being significantly impaired. Furthermore we have recently de...

journal_title：Biochemical Society transactions

authors： Hayden MR,Kastelein JJ,Funke H,Brunzell JD,Ma Y

更新日期：1993-05-01 00:00:00

abstract：:Mucus plays a vital role in protecting the lungs from environmental factors, but conversely, in muco-obstructive airway disease, mucus becomes pathologic. In its protective role, mucus entraps microbes and particles removing them from the lungs via the co-ordinated beating of motile cilia. This mechanism of lung defen...

journal_title：Biochemical Society transactions

authors： Ridley C,Thornton DJ

更新日期：2018-10-19 00:00:00

abstract：:The fission yeast septation initiation network, or SIN, is a signal transduction network that is required for septum formation in Schizosaccharomyces pombe. Its activity is tightly regulated through the cell cycle, to ensure proper co-ordination of mitosis and cytokinesis. SIN signalling requires three protein kinases...

journal_title：Biochemical Society transactions

authors： Krapp A,Simanis V

更新日期：2008-06-01 00:00:00

abstract：:Tribbles (TRIB) proteins are pseudokinase mediators of eukaryotic signalling that have evolved important roles in lipoprotein metabolism, immune function and cellular differentiation and proliferation. In addition, an evolutionary-conserved modulation of PI3K/AKT signalling pathways highlights them as novel and rather...

journal_title：Biochemical Society transactions

authors： Foulkes DM,Byrne DP,Bailey FP,Eyers PA

更新日期：2015-10-01 00:00:00

abstract：:The majority of mRNAs in eukaryotic cells are translated via a method that is dependent upon the recognition of, and binding to, the methylguanosine cap at the 5' end of the mRNA, by a set of protein factors termed eIFs (eukaryotic initiation factors). However, many of the eIFs involved in this process are modified an...

journal_title：Biochemical Society transactions

authors： King HA,Cobbold LC,Willis AE

更新日期：2010-12-01 00:00:00

abstract：:The calcium-sensing receptor is a multimodal, multimetabolic sensor that mediates the feedback-dependent control of whole body calcium metabolism. Remarkably, in addition to its role in Ca(2+)(o) (extracellular Ca(2+)) sensing, the CaR (Ca(2+)-sensing receptor) also responds to L-amino acids. L-amino acids appear to a...

journal_title：Biochemical Society transactions

authors： Conigrave AD,Mun HC,Brennan SC

更新日期：2007-11-01 00:00:00

abstract：:Enzymes of the 1-deoxy-D-xylulose 5-phosphate/2-C-methylerythritol 4-phosphate (DOXP/MEP) pathway are targets for new herbicides and antibacterial drugs. Until now, no inhibitors for the DOXP synthase have been known of. We show that one of the breakdown products of the herbicide clomazone affects the DOXP synthase. O...

journal_title：Biochemical Society transactions

authors： Mueller C,Schwender J,Zeidler J,Lichtenthaler HK

更新日期：2000-12-01 00:00:00

abstract：:A comparative approach has been used to study the role of several lipid-body-binding proteins in plants and animals. Caleosins are a newly discovered class of calcium-binding lipid-body proteins found in plants and fungi, which we now report to have separate endoplasmic reticulum- and lipid-body-associated isoforms. W...

journal_title：Biochemical Society transactions

authors： Murphy DJ,Hernendez-Pinzon I,Patel K,Hope RG,McLauchlan J

更新日期：2000-12-01 00:00:00

abstract：:Sam68 (Src-associated in mitosis 68 kDa) is the prototypical member of the STAR (signal transducer and activator of RNA) family of RNA-binding proteins. Sam68 is implicated in a number of cellular processes including signal transduction, transcription, RNA metabolism, cell cycle regulation and apoptosis. In the presen...

journal_title：Biochemical Society transactions

authors： Rajan P,Gaughan L,Dalgliesh C,El-Sherif A,Robson CN,Leung HY,Elliott DJ

更新日期：2008-06-01 00:00:00