Detecting the Significant Flux Backbone of Escherichia coli metabolism.

Abstract:

:The heterogeneity of computationally predicted reaction fluxes in metabolic networks within a single flux state can be exploited to detect their significant flux backbone. Here, we disclose the backbone of Escherichia coli, and compare it with the backbones of other bacteria. We find that, in general, the core of the backbones is mainly composed of reactions in energy metabolism corresponding to ancient pathways. In E. coli, the synthesis of nucleotides and the metabolism of lipids form smaller cores which rely critically on energy metabolism. Moreover, the consideration of different media leads to the identification of pathways sensitive to environmental changes. The metabolic backbone of an organism is thus useful to trace simultaneously both its evolution and adaptation fingerprints.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Güell O,Sagués F,Serrano MÁ

doi

10.1002/1873-3468.12650

subject

Has Abstract

pub_date

2017-05-01 00:00:00

pages

1437-1451

issue

10

eissn

0014-5793

issn

1873-3468

journal_volume

591

pub_type

信件
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