Location of tolerated insertions/deletions in the structure of the maltose binding protein.

Abstract:

:In a previous study [(1987) J. Mol. Biol. 194, 663-673], we isolated ten insertion/deletion mutants (indels) of the maltose binding protein for which the maltose binding constant was only a little or not at all affected. In this paper, we have localized these mutations in the recently solved three-dimensional structure. Contrary to the general expectation, most of the insertion/deletion modifications occurred within elements of secondary structure. An analysis of the inserted residues for three indels found within alpha helices allowed an interpretation regarding protein structure accommodation to such modifications.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Betton JM,Martineau P,Saurin W,Hofnung M

doi

10.1016/0014-5793(93)81409-s

subject

Has Abstract

pub_date

1993-06-28 00:00:00

pages

34-8

issue

1-2

eissn

0014-5793

issn

1873-3468

pii

0014-5793(93)81409-S

journal_volume

325

pub_type

杂志文章,评审
  • Sequence effects of single base loops in intramolecular quadruplex DNA.

    abstract::We have examined the properties of intramolecular G-quadruplexes in which the G3 tracts are separated by single base loops. The most stable complex contained 1',2'-dideoxyribose in all three loops, while loops containing T and C were slightly less stable (by about 2 degrees C). Quadruplexes containing loops with singl...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2007.03.040

    authors: Rachwal PA,Brown T,Fox KR

    更新日期:2007-04-17 00:00:00

  • Specific characteristics of phosphofructokinase-microtubule interaction.

    abstract::Muscle phosphofructokinase interacts with microtubule-associated protein-free microtubules resulting in a reduction of the overall activity of the enzyme [Lehotzky et al. (1993) J. Biol. Chem. 268, 10888-10894] and periodical cross-linking of the tubules [Lehotzky et al. (1994) Biochem. Biophys. Res. Commun. 204, 585-...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)01510-8

    authors: Vértessy BG,Kovács J,Ovádi J

    更新日期:1996-01-29 00:00:00

  • MECP2 mutation in male patients with non-specific X-linked mental retardation.

    abstract::In contrast to the preponderance of affected males in families with X-linked mental retardation, Rett syndrome (RTT) is a neurological disorder occurring almost exclusively in females. The near complete absence of affected males in RTT families has been explained by the lethal effect of an X-linked gene mutation in he...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01994-3

    authors: Orrico A,Lam C,Galli L,Dotti MT,Hayek G,Tong SF,Poon PM,Zappella M,Federico A,Sorrentino V

    更新日期:2000-09-22 00:00:00

  • Limited proteolysis of the coxsackievirus and adenovirus receptor (CAR) on HeLa cells exposed to trypsin.

    abstract::Trypsin treatment of HeLa cells results in a limited proteolysis of the coxsackievirus and adenovirus receptor (CAR) after which the cleaved CAR remains cell-associated and tryptic peptides remain associated through disulfide bonds. Trypsin-treated HeLa cells remain susceptible to infection with coxsackievirus B and p...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)02144-x

    authors: Carson SD

    更新日期:2000-11-03 00:00:00

  • Biochemical characterization of the p51 sub-unit of human immunodeficiency virus reverse transcriptase in homo- and heterodimeric recombinant forms of the enzyme.

    abstract::The biochemical properties of the p51 subunit of HIV-1 reverse transcriptase (RT) were studied in order to understand its role in the heterodimeric form p66/p51 found in virions. A recombinant form of RT, p51/p51, expressed in yeast, was purified and characterized. The enzyme was affinity labeled using a 5' modified o...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)80202-r

    authors: el Dirani-Diab R,Andreola ML,Nevinsky G,Tharaud D,Barr PJ,Litvak S,Tarrago-Litvak L

    更新日期:1992-04-13 00:00:00

  • Structural and biochemical analysis of Ras-effector signaling via RalGDS.

    abstract::The structure of the complex of Ras with the Ras-binding domain of its effector RalGDS (RGS-RBD), the first genuine Ras-effector complex, has been solved by X-ray crystallography. As with the Rap-RafRBD complex (Nasser et al., 1995), the interaction is via an inter-protein beta-sheet between the switch I region of Ras...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00555-4

    authors: Vetter IR,Linnemann T,Wohlgemuth S,Geyer M,Kalbitzer HR,Herrmann C,Wittinghofer A

    更新日期:1999-05-21 00:00:00

  • Demonstration and partial purification of lactoperoxidase from human colostrum.

    abstract::A peroxidase with stability, chromatographic and immunoreactive properties similar to that of bovine lactoperoxidase has been partly purified from human colostrum. Hydrophobic interaction chromatography on Phenyl-Sepharose C1-4B gave a 10-fold purification with an apparent recovery of about 45%. The enzyme was quantit...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)81177-1

    authors: Langbakk B,Flatmark T

    更新日期:1984-09-03 00:00:00

  • Mitochondrial DNA depletion causes morphological changes in the mitochondrial reticulum of cultured human cells.

    abstract::Depletion of mitochondrial DNA (mtDNA) causes defects in respiratory activity and energy production. Recent studies have shown mitochondria to exist primarily as reticular networks, having tubular cristae. Using fluorescence microscopy and transmission electron microscopy, we have examined mitochondrial morphology and...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01527-1

    authors: Gilkerson RW,Margineantu DH,Capaldi RA,Selker JM

    更新日期:2000-05-26 00:00:00

  • Activation of alternative oxidase and uncoupling protein lowers hydrogen peroxide formation in amoeba Acanthamoeba castellanii mitochondria.

    abstract::Mitochondria of amoeba Acanthamoeba castellanii were used to determine the role of two energy-dissipating systems, i.e., a free fatty acid (FFA)-activated, purine nucleotide-inhibited uncoupling protein (AcUCP) and a FFA-insensitive, purine nucleotide-activated ubiquinol alternative oxidase (AcAOX), in decreasing reac...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2005.04.081

    authors: Czarna M,Jarmuszkiewicz W

    更新日期:2005-06-06 00:00:00

  • The Nap family proteins, CG5017/Hanabi and Nap1, are essential for Drosophila spermiogenesis.

    abstract::Spermiogenesis is a dynamic process leading to alterations in cell morphology. In spermiogenesis, the roles of the histone chaperones are largely unknown. Here, I report the unexpected roles of two Nap family proteins, CG5017/Hanabi and nucleosome assembly protein 1 (Nap1) in Drosophila. Hanabi is mainly localized in ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2013.02.019

    authors: Kimura S

    更新日期:2013-04-02 00:00:00

  • The fas locus of the phytopathogen Rhodococcus fascians affects mitosis of tobacco BY-2 cells.

    abstract::The effect of Rhodococcus fascians, the causal agent of leafy gall disease, on the mitotic behavior of synchronized tobacco Bright Yellow-2 (BY-2) cells was investigated. Incubation of aphidicolin-synchronized BY-2 cells with R. fascians cells specifically resulted in a broader mitotic index peak, an effect that was l...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)02248-7

    authors: Temmerman W,Ritsema T,Simón-Mateo C,Van Montagu M,Mironov V,Inzé D,Goethals K,Holsters M

    更新日期:2001-03-09 00:00:00

  • Modification of serine 392 is a critical event in the regulation of p53 nuclear export and stability.

    abstract::Although it has been shown that phosphorylations of p53 serine its residues are critical events for the regulation of their function, the specific biological effects of each of these phosphorylations, especially at serine 392, remain to be elucidated. Serine 392 has been proposed to play a role in the tetramerization ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2004.07.014

    authors: Kim YY,Park BJ,Kim DJ,Kim WH,Kim S,Oh KS,Lim JY,Kim J,Park C,Park SI

    更新日期:2004-08-13 00:00:00

  • Functional and molecular characterization of a peptide transporter in the rat PC12 neuroendocrine cell line.

    abstract::We have studied functional properties of peptide transport in the pheochromocytoma neuroendocrine cell line from rat. The neutral peptide D-Phe-L-Ala (resistant to hydrolysis) is a good substrate for uptake into these cells. Transport is substantially inhibited by diethylpyrocarbonate pretreatment and is stimulated by...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(01)03081-2

    authors: Hussain I,Zanic-Grubisic T,Kudo Y,Boyd CA

    更新日期:2001-11-23 00:00:00

  • Repression of NR4A1 by a chromatin modifier promotes docetaxel resistance in PC-3 human prostate cancer cells.

    abstract::Epigenetic silencing mechanisms play an important role in chemoresistance of human cancer. Here we report the upregulated expression of metastasis-associated protein 1 (MTA1), a component of the nucleosome remodeling deacetylation (NuRD) complex, in chemoresistant prostate cancer (PCa). MTA1 knockdown in PC-3 cells in...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2013.06.029

    authors: Yu L,Su YS,Zhao J,Wang H,Li W

    更新日期:2013-08-19 00:00:00

  • Organization of rat uricase chromosomal gene differs greatly from that of the corresponding plant gene.

    abstract::The rat chromosomal gene for uricase was cloned. The gene spans more than 20 kilobases and the coding region is divided into 8 exons by 7 introns. The organization of the rat uricase gene is so greatly different from that of the soybean gene that the difference may not have been caused only by the removal of some ance...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)80789-l

    authors: Motojima K,Goto S

    更新日期:1990-05-07 00:00:00

  • UCN-01, an anti-tumor drug, is a selective inhibitor of the conventional PKC subfamily.

    abstract::A selective PKC inhibitor, UCN-01, was shown to exhibit anti-tumor activity in vitro and in vivo. We investigated UCN-01 with respect to isozyme-specific PKC inhibition using purified recombinant or rabbit brain PKC isozymes, cPKC alpha, beta and gamma, nPKC delta, epsilon and eta, and a PKC zeta. Of the PKC isozymes ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)00042-8

    authors: Mizuno K,Noda K,Ueda Y,Hanaki H,Saido TC,Ikuta T,Kuroki T,Tamaoki T,Hirai S,Osada S

    更新日期:1995-02-13 00:00:00

  • Measurement of relative amounts of phospho- and dephospho-B-50(GAP-43) peptides by fast atom bombardment-mass spectrometry.

    abstract::The biological role of phosphoproteins depends upon their degree of phosphorylation in vivo. Methods currently available to measure the degree of phosphorylation of a protein involve indirect procedures to detect the 32P-phosphate incorporation. We report here a direct method to measure relative amounts of phospho- an...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)81236-f

    authors: Di Luca M,de Graan PN,De Angelis L,Gispen WH,Cattabeni F

    更新日期:1992-04-20 00:00:00

  • Positive feedback between ethanolamine-specific phospholipid base exchange and cytochrome P450 activities in rat liver microsomes. The effect of clofibric acid.

    abstract::The results of the present investigation relate the effects of the nutritional state and administration of clofibric acid (CLA), a hypolipidaemic drug and peroxisomal proliferator, on phosphatidylethanolamine (PE) synthesis in rat liver and fatty acid metabolism. Fasting and CLA treatment of animals causes an increase...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)00960-0

    authors: Lenart J,Komańska I,Pikuła S,Jasińska R

    更新日期:1998-08-28 00:00:00

  • Physico-chemical properties of the hydroxysterol binding protein of human lymphocyte cytosol. Effects of high salt concentrations and molybdate.

    abstract::Side chain-hydroxylated derivatives of cholesterol (OH sterol) inhibiting lymphoblastic transformation bind with high affinity and specificity to a hydroxysterol binding protein (OHSBP) in the cytosol of human lymphocytes. These binding properties of OHSBP suggested some analogies with that of steroid hormone receptor...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)80798-x

    authors: Defay R,Astruc M,Beseme F,Descomps B,Crastes de Paulet A

    更新日期:1984-08-06 00:00:00

  • A clamp-like orientation of basic residues set in a parallelogram is essential for heparin binding.

    abstract::While the majority of studies have focused on the biological roles of heparin-binding proteins, relatively little is known about their key residues and structural elements responsible for heparin interaction. In this study, we employed the IgG-binding domain B1 of Streptococcal protein G as a miniature scaffold to inv...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.12361

    authors: Cheng YY,Cheng CS,Lee TR,Chang WS,Lyu PC

    更新日期:2016-09-01 00:00:00

  • Induction of apoptosis and of interleukin-1beta secretion by 7beta-hydroxycholesterol and 7-ketocholesterol: partial inhibition by Bcl-2 overexpression.

    abstract::The oxysterols, 7beta-hydroxycholesterol and 7-ketocholesterol, are involved in the cytotoxicity of oxidized LDL. To elucidate their molecular mechanisms, the human promonocytic leukemia cells U937 and U4 were used. U4 cells overexpressing Bcl-2 were obtained by transfection of U937 cells. 7Beta-hydroxycholesterol and...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)01473-7

    authors: Lizard G,Lemaire S,Monier S,Gueldry S,Néel D,Gambert P

    更新日期:1997-12-15 00:00:00

  • Immunometabolism of human autoimmune diseases: from metabolites to extracellular vesicles.

    abstract::Immunometabolism focuses on the mechanisms regulating the impact of metabolism on lymphocyte activity and autoimmunity outbreak. The adipose tissue is long known to release adipokines, either pro- or anti-inflammatory factors bridging nutrition and immune function. More recently, adipocytes were discovered to also rel...

    journal_title:FEBS letters

    pub_type: 杂志文章,评审

    doi:10.1002/1873-3468.12733

    authors: de Candia P,De Rosa V,Gigantino V,Botti G,Ceriello A,Matarese G

    更新日期:2017-10-01 00:00:00

  • Evidence for Rap1 in vascular smooth muscle cells. Regulation of their expression by platelet-derived growth factor BB.

    abstract::The effect of platelet-derived growth factor (PDGF) on Rap1 expression was investigated in rat vascular smooth muscle cells (SMC). First, evidence for Rap1 proteins was shown by their: (i) detection in membranes using a specific anti-Rap1 antibody, (ii) typical shift in electrophoretic mobility as a consequence of red...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)80492-3

    authors: Quarck R,Bryckaert M,Magnier C,Corvazier E,Bredoux R,de Gunzburg J,Fontenay M,Tobelem G,Enouf J

    更新日期:1994-04-04 00:00:00

  • Calcium influx through annexin V ion channels into large unilamellar vesicles measured with fura-2.

    abstract::A new assay for the calcium channel activity of annexin V was developed. The calcium-sensitive fluorescence indicator, fura-2, was incorporated into large unilamellar vesicles (LUV). After establishing a calcium gradient across the liposomal membranes, native or mutated annexin V was added. The resulting calcium influ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)81507-v

    authors: Berendes R,Burger A,Voges D,Demange P,Huber R

    更新日期:1993-02-08 00:00:00

  • Lungs of patients with idiopathic pulmonary alveolar proteinosis express a factor which neutralizes granulocyte-macrophage colony stimulating factor.

    abstract::Mice deficient in granulocyte-macrophage colony stimulating factor (GM-CSF) develop pulmonary alveolar proteinosis (PAP). We found that bronchoalveolar lavage fluid (BALF) from 11 patients with idiopathic pulmonary alveolar proteinosis (IPAP) suppressed the growth of peripheral blood monocytes and TF-1 cells, a cell l...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(98)01668-8

    authors: Tanaka N,Watanabe J,Kitamura T,Yamada Y,Kanegasaki S,Nakata K

    更新日期:1999-01-15 00:00:00

  • Chromatin-bound and free RNA polymerase A activities in rat thymus cells following glucocorticoid treatment.

    abstract::Treatment of rat thymus cell suspensions with dexamethasone resulted in inhibition of engaged RNA polymerase A, without significant change in free pool activity. Studies with the re-initiation inhibitor, rifamycin AF/0-13, and measurements of numbers of RNA polymerase A molecules and of elongation rates showed that th...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)81031-5

    authors: Dembinski TC

    更新日期:1984-07-23 00:00:00

  • Thermodynamic and kinetic control of ATP synthesis in yeast mitochondria: role of delta pH.

    abstract::ATP synthesis rate, measured as the variation in external Pi concentration, varied as a linear function of either delta mu H+ or delta Gpin, in such a manner that the delta Gpin/delta mu H+ ratio increased while VATP increased. We also observed a linear dependence of the flux control coefficient of the Pi carrier on...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(89)80539-3

    authors: Beauvoit B,Rigoulet M,Guerin B

    更新日期:1989-02-27 00:00:00

  • Gln(84) of moloney murine leukemia virus reverse transcriptase regulates the incorporation rates of ribonucleotides and deoxyribonucleotides.

    abstract::Moloney murine leukemia virus reverse transcriptase (RT) selectively uses deoxyribonucleotides over ribonucleotides (rNTPs) as substrates. Substitution of F155 with valine (F155V) was previously found to increase the enzyme's affinity for rNTPs, though without affecting the V(max) for catalysis, and thereby conferred ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2006.01.044

    authors: Liu S,Goff SP,Gao G

    更新日期:2006-02-20 00:00:00

  • Converging antigenic structure of a recombinant viral peptide displayed on different frameworks of carrier proteins.

    abstract::A peptide reproducing the G-H loop amino acid sequence of foot-and-mouth disease virus VP1 protein was fused to the solvent-exposed C-terminus of the bacteriophage P22 tailspike protein [Carbonell and Villaverde (1996) Gene, in press], a homotrimeric polypeptide with a strong beta-helical structure. This fusion does n...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(96)01169-6

    authors: Carbonell X,Benito A,Villaverde A

    更新日期:1996-11-18 00:00:00

  • Translation arrest as a protein quality control system for aberrant translation of the 3'-UTR in mammalian cells.

    abstract::Read-through or mutations of a stop codon resulting in translation of the 3'-UTR produce potentially toxic C-terminally extended proteins. However, quality control mechanisms for such proteins are poorly understood in mammalian cells. Here, a comprehensive analysis of the 3'-UTRs of genes associated with hereditary di...

    journal_title:FEBS letters

    pub_type: 社论

    doi:10.1002/1873-3468.13362

    authors: Hashimoto S,Nobuta R,Izawa T,Inada T

    更新日期:2019-04-01 00:00:00