Abstract:
:Molecular variability was assessed for 18 isolates of cowpea mild mottle virus (CPMMV, genus Carlavirus, family Betaflexiviridae) found infecting soybean in various Brazilian states (Bahia, Goiás, Maranhão, Mato Grosso, Minas Gerais, Pará) in 2001 and 2010. A variety of symptoms was expressed in soybean cv. CD206, ranging from mild (crinkle/blistering leaves, mosaic and vein clearing) to severe (bud blight, dwarfing, leaf and stem necrosis). Recombination analysis revealed only one CPMMV isolate to be recombinant. Pairwise comparisons and phylogenetic analysis were performed for partial genomes (ORF 2 to the 3' terminus) and for each ORF individually (ORFs 2 to 6), showing the isolates to be distinct. The topology of the phylogenetic tree could be related to symptoms, but not to the year of collection or geographical origin. Additionally, the phylogenetic analysis supported the existence of two distinct strains of the virus, designated CPMMV-BR1 and CPMMV-BR2, with molecular variations between them.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Zanardo LG,Silva FN,Lima AT,Milanesi DF,Castilho-Urquiza GP,Almeida AM,Zerbini FM,Carvalho CMdoi
10.1007/s00705-013-1879-0subject
Has Abstractpub_date
2014-04-01 00:00:00pages
727-37issue
4eissn
0304-8608issn
1432-8798journal_volume
159pub_type
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