Evolutionary story of mammalian-specific amelogenin exons 4, "4b", 8, and 9.

Abstract:

:Amelogenin gene organization varies from 6 exons (1,2,3,5,6,7) in amphibians and sauropsids to 10 in rodents. The additional exons are exons 4, 8, 9, and "4b", the latter being as yet unidentified in AMELX transcripts. To learn more about the evolutionary origin of these exons, we used an in silico approach to find them in 39 tetrapod genomes. AMEL organization with 6 exons was the ancestral condition. Exon 4 was created in an ancestral therian (marsupials + placentals), then exon 9 in an ancestral placental, and finally exons "4b" and 8 in rodents, after divergence of the squirrel lineage. These exons were either inactivated in some lineages or remained functional: Exon 4 is functional from artiodactyls onward; exon 9 is known, to date, only in rodents, but could be coding in various mammals; and exon "4b" was probably coding in some rodents. We performed PCR of cDNA isolated from mouse and human tooth buds to identify the presence of these transcripts. A sequence analogous to exon "4b", and to exon 9, could not be amplified from the respective tooth cDNA, indicating that even though sequences similar to these exons are present, they are not transcribed in these species.

journal_name

J Dent Res

authors

Sire JY,Huang Y,Li W,Delgado S,Goldberg M,Denbesten PK

doi

10.1177/0022034511423399

subject

Has Abstract

pub_date

2012-01-01 00:00:00

pages

84-9

issue

1

eissn

0022-0345

issn

1544-0591

pii

0022034511423399

journal_volume

91

pub_type

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