Abstract:
:An iterative position-specific score matrix (PSSM)-based approach was used to predict sigma(28) promoters in 11 Shewanella genomes. The Shewanella Correlation Browser was used to distinguish true-positive predictions from false-positive predictions in Shewanella oneidensis MR-1 by generating a sigma(28)-regulated transcriptional network from transcriptional profiling data. This dual-pronged approach identified several genes that have sigma(28) promoters and that may be involved with motility or chemotaxis in Shewanella.
journal_name
FEMS Microbiol Lettjournal_title
FEMS microbiology lettersauthors
Song W,Juhn FS,Naiman DQ,Konstantinidis KT,Gardner TS,Ward MJdoi
10.1111/j.1574-6968.2008.01175.xsubject
Has Abstractpub_date
2008-06-01 00:00:00pages
223-30issue
2eissn
0378-1097issn
1574-6968pii
FML1175journal_volume
283pub_type
杂志文章abstract::A gene fusion between the Saccharomyces cerevisiae actin gene promoter and the cDNA of the Fusarium solani f. sp. pisi pelA gene has been constructed. This expression cassette has been introduced into the industrial wine yeast strain T73. The resulting recombinant strain is able to secrete active PELA enzyme into the ...
journal_title:FEMS microbiology letters
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journal_title:FEMS microbiology letters
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