Hydrolysis of non-cognate aminoacyl-adenylates by a class II aminoacyl-tRNA synthetase lacking an editing domain.

Abstract:

:Aminoacyl-tRNA synthetases, a group of enzymes catalyzing aminoacyl-tRNA formation, may possess inherent editing activity to clear mistakes arising through the selection of non-cognate amino acid. It is generally assumed that both editing substrates, non-cognate aminoacyl-adenylate and misacylated tRNA, are hydrolyzed at the same editing domain, distant from the active site. Here, we present the first example of an aminoacyl-tRNA synthetase (seryl-tRNA synthetase) that naturally lacks an editing domain, but possesses a hydrolytic activity toward non-cognate aminoacyl-adenylates. Our data reveal that tRNA-independent pre-transfer editing may proceed within the enzyme active site without shuttling the non-cognate aminoacyl-adenylate intermediate to the remote editing site.

journal_name

FEBS Lett

journal_title

FEBS letters

authors

Gruic-Sovulj I,Rokov-Plavec J,Weygand-Durasevic I

doi

10.1016/j.febslet.2007.09.058

subject

Has Abstract

pub_date

2007-10-30 00:00:00

pages

5110-4

issue

26

eissn

0014-5793

issn

1873-3468

pii

S0014-5793(07)01042-3

journal_volume

581

pub_type

杂志文章
  • Comparison of proline and N-methylnorleucine induced conformational equilibria in cyclic pentapeptides.

    abstract::The cyclic, imido acid containing pentapeptides cyclo(Asp-Trp-(NMe)Nle-Asp-Phe) (cpp[NMeNle(3)]) and cyclo(Asp-Trp-Pro-Asp-Phe) (cpp[Pro(3)]) have been investigated by 1H-NMR spectroscopy in DMSO and by restrained molecular dynamics methods. The spectra indicate the existence of at least four cis/trans isomers for cpp...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(96)00469-3

    authors: Weisshoff H,Wieprecht T,Henklein P,Frömmel C,Antz C,Mügge C

    更新日期:1996-06-03 00:00:00

  • The cytostatic activity of 5-(1-azidovinyl)-2'-deoxyuridine (AzVDU) against herpes simplex virus thymidine kinase gene-transfected FM3A cells is due to inhibition of thymidylate synthase and enhanced by UV light (lambda = 254 nm) exposure.

    abstract::5-(1-Azidovinyl)-2'-deoxyuridine (AzVDU) and a series of 5-[1-azido-2-halogenoethyl]-derivatives of beta-D-arabinofuranosyluracil (AU) proved markedly inhibitory to the replication of herpes simplex virus type 1 (HSV-1) and varicella zoster virus (VZV), but not thymidine kinase (TK)-deficient HSV-1 and VZV strains. No...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)00994-k

    authors: Balzarini J,Andrei G,Kumar R,Knaus EE,Wiebe LI,De Clercq E

    更新日期:1995-10-02 00:00:00

  • Evidence for co-regulation of Cu,Zn superoxide dismutase and metallothionein gene expression in yeast through transcriptional control by copper via the ACE 1 factor.

    abstract::Saccharomyces cerevisiae mutant strain DTY26, lacking ACE1, the protein mediator for the induction of metallothionein gene expression, is unable to increase Cu,Zn superoxide dismutase mRNA in response to copper. In the wild-type strain DTY22 transcription of both Cu,Zn superoxide dismutase and metallothionein genes is...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(91)80131-l

    authors: Carri MT,Galiazzo F,Ciriolo MR,Rotilio G

    更新日期:1991-01-28 00:00:00

  • Photolabelling of D-beta-hydroxybutyrate apodehydrogenase with azidoaryl phospholipids.

    abstract::Two synthetic photoactive azidoarylphosphatidylcholines were used to investigate the level of interaction between D-beta-hydroxybutyrate apodehydrogenase (apoBDH), an amphipathic membrane protein, with the hydrophobic domain of phospholipids. The two synthetic lecithins, PL I (1-myristoyl-2-12-N-(4-azido-2-nitrophenyl...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(85)81178-9

    authors: el Kebbaj MS,Berrez JM,Lakhlifi T,Morpain C,Latruffe N

    更新日期:1985-03-11 00:00:00

  • Recognizing the pleckstrin homology domain fold in mammalian phospholipase D using hidden Markov models.

    abstract::Phospholipase D was first described in plant tissue but has recently been shown to occur in mammalian cells where it is activated by cell surface receptors. Its mode of activation by receptors in unclear. Biochemical studies suggest that it may occur downstream of other effector proteins and that small GTP-dependent r...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00366-x

    authors: Holbrook PG,Geetha V,Beaven MA,Munson PJ

    更新日期:1999-04-09 00:00:00

  • Chemical synthesis and biological activity of a novel antibacterial peptide deduced from a pig myeloid cDNA.

    abstract::Several myeloid precursors of antibacterial peptides have recently been shown to share homologous pre- and pro-regions. Taking advantage of this homology, a novel cDNA was cloned from pig bone marrow RNA. This encodes a 166-residue polypeptide with highly conserved pre- (29 residues) and pro- (101 residues) sequences,...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(94)80214-9

    authors: Storici P,Scocchi M,Tossi A,Gennaro R,Zanetti M

    更新日期:1994-01-17 00:00:00

  • Evolutionary substitution of two amino acids in chloroplast SRP54 of higher plants cause its inability to bind SRP RNA.

    abstract::The chloroplast signal recognition particle (cpSRP) consists of a conserved 54 kDa subunit (cpSRP54) and a unique 43 kDa subunit (cpSRP43) but lacks SRP-RNA, an essential and universally conserved component of cytosolic SRPs. High sequence similarity exists between cpSRP54 and bacterial SRP54 except for a plant-specif...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2008.08.014

    authors: Richter CV,Träger C,Schünemann D

    更新日期:2008-09-22 00:00:00

  • The catalytic power of magnesium chelatase: a benchmark for the AAA(+) ATPases.

    abstract::In the first committed reaction of chlorophyll biosynthesis, magnesium chelatase couples ATP hydrolysis to the thermodynamically unfavorable Mg(2+) insertion into protoporphyrin IX (ΔG°' of circa 25-33 kJ·mol(-1) ). We explored the thermodynamic constraints on magnesium chelatase and demonstrate the effect of nucleoti...

    journal_title:FEBS letters

    pub_type: 信件

    doi:10.1002/1873-3468.12214

    authors: Adams NB,Brindley AA,Hunter CN,Reid JD

    更新日期:2016-06-01 00:00:00

  • Insulin-induced translocation of glucose transporters in rat hindlimb muscles.

    abstract::Insulin causes a translocation of glucose transporters from intracellular microsomes to the plasma membrane in adipocytes. To determine whether insulin has a similar effect in rat hindlimb muscles, we used glucose-inhibitable cytochalasin B binding to estimate the number of glucose transporters in membrane fractions f...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)80452-0

    authors: Klip A,Ramlal T,Young DA,Holloszy JO

    更新日期:1987-11-16 00:00:00

  • Sargaquinoic acid and sargahydroquinoic acid from Sargassum yezoense stimulate adipocyte differentiation through PPARalpha/gamma activation in 3T3-L1 cells.

    abstract::We screened active compounds from natural marine products able to increase PPARalpha/gamma transcriptional activity. Sargaquinoic acid (SQA) and sargahydroquinoic acid (SHQA) from Sargassum yezoense were identified as novel PPARalpha/gamma dual agonists. The binding affinity of SQA with PPARgamma was higher than that ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2008.09.011

    authors: Kim SN,Choi HY,Lee W,Park GM,Shin WS,Kim YK

    更新日期:2008-10-15 00:00:00

  • The caffeine-sensitive Ca2+ store in bovine adrenal chromaffin cells; an examination of its role in triggering secretion and Ca2+ homeostasis.

    abstract::The effect of caffeine on catecholamine secretion and intracellular free Ca2+ concentration [( Ca2+]i) in bovine adrenal chromaffin cells was examined using single fura-2-loaded cells and cell populations. In cell populations caffeine elicited a large (approximately 200 nM) transient rise in [Ca2+]i that was independe...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81514-o

    authors: Cheek TR,O'Sullivan AJ,Moreton RB,Berridge MJ,Burgoyne RD

    更新日期:1990-06-18 00:00:00

  • Bile salt activation of human cholesterol esterase does not require protein dimerisation.

    abstract::Human milk cholesterol esterase (bile salt-activated lipase) plays a role in the dietary uptake of triacylglyceride and cholesteryl ester. The activities toward these substrates are mediated through a unique bile salt-activated mechanism. Previously, it has been proposed that a necessary step in this process is prior ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)00215-9

    authors: Loomes KM,Senior HE

    更新日期:1997-04-01 00:00:00

  • Reduction of mitochondrial tRNALeu(UUR) aminoacylation by some MELAS-associated mutations.

    abstract::The mitochondrial myopathy, encephalopathy, lactic acidosis and stroke-like episodes syndrome (MELAS) is a rare congenital disorder of mitochondrial DNA. Five single nucleotide substitutions within the human mitochondrial tRNALeu(UUR) gene have been reported to be associated with MELAS. Here, we provide in vitro evide...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2004.11.004

    authors: Hao R,Yao YN,Zheng YG,Xu MG,Wang ED

    更新日期:2004-12-03 00:00:00

  • The NH2-terminal cleavage of Escherichia coli translational initiation factor IF3. A mechanism to control the intracellular level of the factor?

    abstract::A short form of Escherichia coli translational initiation factor IF3, repeatedly found both in vivo and in vitro, lacking the positively charged N-terminal hexapeptide has been produced by mild trypsinization. The properties of this short form of IF3 have been studied. Compared to the long native form of the factor, t...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(87)80124-2

    authors: Lammi M,Pon CL,Gualerzi CO

    更新日期:1987-05-04 00:00:00

  • Iron(II) induces changes in the conformation of mammalian mitochondrial DNA resulting in a reduction of its transcriptional rate.

    abstract::Living isolated mitochondria incubated with iron(II) show a major alteration in mitochondrial DNA (mtDNA) conformational forms as assessed by Southern blot analysis of undigested mtDNA. In the presence of iron(II), form I is transformed into form III in a dose-dependent manner. This alteration in mtDNA conformation sh...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01768-3

    authors: Asín J,Pérez-Martos A,Fernández-Silva P,Montoya J,Andreu AL

    更新日期:2000-09-01 00:00:00

  • Down-regulation by retinoic acid of the catalytic subunit of protein phosphatase type 2A during granulocytic differentiation of HL-60 cells.

    abstract::Activity of protein phosphatase measured in the absence of divalent cations was decreased by 50% during all-trans retinoic acid (ATRA)-induced HL-60 cell differentiation into the granulocytic phenotype. Treatment of HL-60 cells with ATRA led to a dramatic decrease in the amount of protein phosphatase type 2A (PP2A) pr...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(93)80113-9

    authors: Tawara I,Nishikawa M,Morita K,Kobayashi K,Toyoda H,Omay SB,Shima H,Nagao M,Kuno T,Tanaka C

    更新日期:1993-04-26 00:00:00

  • Effect of antipsychotic drugs on the molecular action of cholera toxin in rabbit intestinal epithelial cells.

    abstract::Antipsychotic drugs of known antidiarrhoeal and anticalmodulin activity inhibited the cholera-toxin-catalysed ADP-ribosylation of proteins of Mr 37,000, 40,000 and 45,000 (thought to be regulatory components of the adenylate cyclase complex) that was previously shown to occur in plasma membranes from rabbit intestinal...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)80444-n

    authors: Longbottom D,van Heyningen S

    更新日期:1990-10-15 00:00:00

  • Activation of sphingosine kinase in pheochromocytoma PC12 neuronal cells in response to trophic factors.

    abstract::Nerve growth factor (NGF), basic fibroblast growth factor (bFGF), dibutyryl cAMP and forskolin, known differentiating agents for pheochromocytoma PC12 cells, induced sustained activation of sphingosine kinase, the enzyme responsible for the formation of the sphingolipid second messenger, sphingosine-1-phosphate, which...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(97)01277-5

    authors: Rius RA,Edsall LC,Spiegel S

    更新日期:1997-11-10 00:00:00

  • Regulation of oxygen consumption and microcirculation by alpha-sympathetic nerves in isolated perfused rat liver.

    abstract::In isolated rat liver perfused at constant flow with erythrocyte-free Krebs-Henseleit bicarbonate buffer containing 5 mM glucose and 2 mM lactate, perivascular stimulation of the hepatic nerves caused a rapid decrease of oxygen uptake, a decrease of the periportal and, after a transient rise, of the perivenous tissue ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(84)80844-3

    authors: Ji S,Beckh K,Jungermann K

    更新日期:1984-02-13 00:00:00

  • Insulin potentiates the transactivation potency of the glucocorticoid receptor.

    abstract::A single copy of a glucocorticoid-responsive element (GRE) is sufficient in mediating the combinatorial response of a promoter to both glucocorticoids and insulin in HepG2 cells. This requires the presence of active glucocorticoid receptor (GR) since the response is significantly inhibited by the anti-glucocorticoid R...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(96)00115-9

    authors: Georgakopoulos A,Tsawdaroglou N

    更新日期:1996-03-04 00:00:00

  • X-linked inhibitor of apoptosis protein mediates neddylation by itself but does not function as a NEDD8-E3 ligase for caspase-7.

    abstract::X-linked inhibitor of apoptosis protein (XIAP) is a potent antagonist of caspases, and functions as a ubiquitin-E3 ligase by itself and for caspases. Recently, NEDD8, a ubiquitin-like modifier, has been suggested to be used for modification of caspase-7 mediated by XIAP. However, it is not clear whether caspase-7 is a...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/j.febslet.2012.04.056

    authors: Nagano T,Hashimoto T,Nakashima A,Kikkawa U,Kamada S

    更新日期:2012-06-04 00:00:00

  • Small molecule 3PO inhibits glycolysis but does not bind to 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-3 (PFKFB3).

    abstract::6-Phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform 3 (PFKFB3) is a key enzyme of the glycolytic pathway, and it plays an essential role in angiogenesis. 3-(3-Pyridinyl)-1-(4-pyridinyl)-2-propen-1-one (3PO) is frequently used as a glycolysis inhibitor and is thought to inhibit PFKFB3. However, this latter eff...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1002/1873-3468.13878

    authors: Emini Veseli B,Perrotta P,Van Wielendaele P,Lambeir AM,Abdali A,Bellosta S,Monaco G,Bultynck G,Martinet W,De Meyer GRY

    更新日期:2020-09-01 00:00:00

  • Fatty acid 9- and 13-hydroperoxide lyases from cucumber.

    abstract::Fatty acid hydroperoxide lyase (HPL) is a novel P-450 enzyme that cleaves fatty acid hydroperoxides to form short-chain aldehydes and oxo-acids. In cucumber seedlings, the activities of both fatty acid 9HPL and 13HPL could be detected. High 9HPL activity was especially evident in hypocotyls. Using a polymerase chain r...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01997-9

    authors: Matsui K,Ujita C,Fujimoto S,Wilkinson J,Hiatt B,Knauf V,Kajiwara T,Feussner I

    更新日期:2000-09-15 00:00:00

  • Regulation of fructose 2,6-bisphosphate levels in cold-acclimated brown adipose tissue of rat.

    abstract::The effects of cold exposure and T4 administration on fructose 2,6-bisphosphate levels, phosphofructokinase-2 and pyruvate kinase activities were examined in rat brown adipose tissue. Cold adaptation (14 days) gave rise to a 2-fold increase in the amount of fructose 2,6-bisphosphate and phosphofructokinase-2 activity,...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(88)80804-4

    authors: Sobrino F,Gualberto A,Pintado E

    更新日期:1988-02-29 00:00:00

  • cDNA encoding a 59 kDa homolog of ribosomal protein S6 kinase from rabbit liver.

    abstract::We have isolated cDNA molecules encoding a protein with the characteristic sequence elements that are conserved between the catalytic domains of protein kinases. This protein is apparently a serine/threonine kinase and is most closely related to the amino-terminal half of the ribosomal protein S6 kinase II first chara...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(90)81096-7

    authors: Harmann B,Kilimann MW

    更新日期:1990-10-29 00:00:00

  • Ring finger in the peroxisome assembly factor-1.

    abstract::The peroxisome assembly factor-1 (PAF-1) is reported here to contain the signature subsequence for a ring finger motif in its carboxyl-terminus. This conserved subsequence in PAF-1 may be the key to a gene expression regulatory pathway important in peroxisome biogenesis. ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(92)81397-5

    authors: Patarca R,Fletcher MA

    更新日期:1992-11-02 00:00:00

  • Stimulation of steroidogenic acute regulatory protein (StAR) gene expression by D-aspartate in rat Leydig cells.

    abstract::D-aspartate and human chorionic gonadotropin act synergistically to increase testosterone production in purified rat Leydig cells, and D-aspartate stimulates testosterone synthesis even in the absence of human chorionic gonadotropin stimulation. In addition, D-aspartate enhances steady-state cellular mRNA and protein ...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(99)00840-6

    authors: Nagata Y,Homma H,Matsumoto M,Imai K

    更新日期:1999-07-09 00:00:00

  • Liposome destabilization induced by the HIV-1 fusion peptide effect of a single amino acid substitution.

    abstract::The 23-residue synthetic peptide representing the N-terminus of HIV-1 gp41 is known to induce either leakage or fusion of lipid vesicles depending on the experimental conditions. In this paper we report that a polar amino acid substitution V-->E at position 2, known to block gp41 activity in vivo, makes the peptide un...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/0014-5793(95)00257-a

    authors: Pereira FB,Goñi FM,Nieva JL

    更新日期:1995-04-03 00:00:00

  • Enhanced toxicity of Bacillus thuringiensis Cry3A delta-endotoxin in coleopterans by mutagenesis in a receptor binding loop.

    abstract::We used site-directed mutagenesis to modify the Bacillus thuringiensis cry3A gene in amino acid residues 350-354. Two mutant toxins, A1 (R(345)A,Y(350)F,Y(351)F) and A2 (R(345)A,DeltaY(350), DeltaY(351)), showed significantly improved toxicity against Tenebrio molitor (yellow mealworm). The mutant toxin A1 was also mo...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(00)01505-2

    authors: Wu SJ,Koller CN,Miller DL,Bauer LS,Dean DH

    更新日期:2000-05-12 00:00:00

  • Involvement of the telomeric protein Pin2/TRF1 in the regulation of the mitotic spindle.

    abstract::Pin2/TRF1 was independently identified as a telomeric DNA-binding protein (TRF1) that regulates telomere length, and as a protein (Pin2) that can bind the mitotic kinase NIMA and suppress its lethal phenotype. We have previously demonstrated that Pin2/TRF1 levels are cell cycle-regulated and its overexpression induces...

    journal_title:FEBS letters

    pub_type: 杂志文章

    doi:10.1016/s0014-5793(02)02363-3

    authors: Nakamura M,Zhou XZ,Kishi S,Lu KP

    更新日期:2002-03-13 00:00:00